Added a TaskList

Added a Tasklist to keep track of my progress and try to get an idea of
what sort of work I should be focusing on.  This might serve as my
outline.
Update TaskList.md

Worked on the formatting of task list
Added the outline of the Proposed Work

Added the outline of the proposed sections for optimization to chapter-2
Updated gi
Wrote Secondary Electron Proposal and Methods

Added the secondary electron proposal and methods.  A little bit
uncertain where I should place the MLLD discussion, if any where.  I
kinda of want to throw it in as an appendix.
RPM Neutronics Introduction and Methods

Added an introduction to the RPM simulation and to the methods.  I need
to do some MCNP calculations to show the need for optimization. The RPM
methods came from DNDO-Detector, which might need to be modified a
little more.
Updated Neutronic Performance

Added more on the GA optimization technique and on the MCNPX modeling
and how that was accomplished.
Starting the Light Transport Section

Working on the introduction to the light transport.  So far have the
PNNL 14283 report summerized, but want to do the introducing
undergraduates to GEANT4 and the paper on polymerics / just using the
lightoutput from PPO.
Merge branch 'ChapterOne'

Merging ChapterOne back to the main branch.  This is so I can work on creating the compiliation.
Merge branch 'ChapterTwo'

Adding the ChapterTwo Material back to the main branch, in order to work on compilation.
Merge branch 'FrontMatter'

Merging into the main branch in order to work on compilation.
Compilation fails on missing_figure

Working on getting the compilation to work.  I am getting
missing_figures, which I don't know means that it is not being found or
that my latex is messed up.
Merged and now compiles

Main document DisserationProposal.tex updated to compile and work with
the Latex-base submodule.  In addition, I got the missing figure to
work, and corrected some compilation errors.
Updated Vita

Updated vita to include Masters degree, and changed a litle bit of the
wording.  The base content was copied from my Master's Thesis.
Merge branch 'BackMatter'

Added the BackMatter to the main development.
Fixed PNNL 14283 Citation

Fixed the PNNL 14283 citation
A very rough draft

Rough cut timber draft of the Proposal.  Now going to refine the
sections with edits.
Submodule Latex-Base commit

Updating the Latex-Base Submodule.  This may break everything ...
Updated .gitignore

Updated the git ignore file to not track the main PDF file