first commit
controlled-memory version of count16mers
compressed bitvector object skeleton
bvec constructor
added fill length checks
bvec::union() and bvec::intersect()
uint32_t constructor and checks for empty bvec in intersect and union
working toward compiling
yay,it compiled
some changes and bug fixes - still have bugs
fixed more bugs in logical ops logic
splitting 32bit and 64bit bvec code, testing 32bit code.
some but not all bugs fixed
Added simple Makefile.
Just for running the test, for now.
Refactored 'convert' to compress/uncompress
Added debug statements (to the test).
Binary printing.
Isolated failed cases, now on length 4.
Iterating over test cases.
fixed it
fixed the bug
adding 64bit versions but there is a bug in cnt()