Modified inferfaces to adjust to a number of connective components being produced by the reaction list retriever (instead of the original lonely reconstruction).
Created guidelines for the implementation of the SBW dependent LayoutAlgorithm.
Added simple implementation for query.
Added repositories and .gitignore
Test class for SimpleQuery
Downgraded mdk version until 1.3.3 is ready for biowarehouse.
Implementation of SBWAutoLayouterAlgorithm + test using .net command line tool
Implementation of SBWAutoLayouterAlgorithm + test using .net command line tool
Rendering step implemented
Add rhea ws client
variable for the mdk version.
Renamed test to match class name.
Adds license for netbeans.
Adds mdk-warehouse as a dependency.
Initial interfaces and abstract classes for recursive reaction gathering.
Create a property file and generic class to serve these properties
Neighborhood class for rhea
Create a property file and generic class to serve these properties
Neighborhood class for rhea
Merge branch 'develop' of https://github.com/pcm32/LayoutPipeline into develop

Conflicts:
	pom.xml
Compile error fixed
Adds biobabel repository to access chebi dependencies.