Initial commit
Commit before change to assigned_value
Added support for manual atom properties set.
Beta version commit. v0.1
Beta version commit. v0.1. Documentation data and installation changed.
Merge branch 'master' of https://github.com/orex/supercell into HEAD

Conflicts:
	CMakeLists.txt
	doc/CMakeLists.txt
	doc/supercell_man.tex
	libs/utils/c_assigned_value.h
	src/core/common_types.cpp
	src/core/common_types.h
	src/core/d2o_main_class.h
	src/sc_cli/main.cpp
	src/sc_cli/parse_d2o_input.cpp
Small changes.
Small changes in doc.