another test for compute generation
.properties explained; issues #499
commented out test, which is not passed
Merge pull request #562 from georgebyelas/master

added and commented tests to show behavior with doubled parameters names; and .properties explanation issues #499
added a new ontologymatcher plugin
Merge branch 'master' of https://github.com/molgenis/molgenis into work
added templates to distribution; issue #557; moved system executor to compute-core, to make it available where for further developments
Merge pull request #563 from georgebyelas/master

added templates to distribution; issue #557; moved system executor to compute-core, to make it available where for further developments
--run implemented for command-line + test issue 500
Merge pull request #568 from georgebyelas/master

--run implemented for command-line + test; issue 500; also removed erroneously added templates
new exceptions and tests #issue 291
Merge pull request #570 from georgebyelas/master

new exceptions and tests #issue 291
added additional filter to get rid of the bad annotations
command-line refactoring
Merge branch 'master' of https://github.com/molgenis/molgenis
command-line refactoring
Merge pull request #571 from georgebyelas/master

command-line refactoring
remove molgenis-app-omicsconnect, please use molgenis-app-omx
Merge pull request #574 from dennishendriksen/master

Remove molgenis-app-omicsconnect
added extra parameter to specify backend credentials; make it run from database with pilots; issue #573