Update Flatly & Readme links

Fixing the following styles in Flatly.

* **Removing the blue `box-shadow` & add border to form elements and
making them like original Flatly.**
* Fixing the background color of:
  * Well
  * Navbar Input and Toggle
  * Nav Tabs
  * List group
  * Panels
  * Breadcumbs
  * Pre
* Remove the `box-shadow` of the `:active` button state.
* Pagination & Pager hover link was fixed.
* `box-shadow` from well was removed.