indexer: use a hashtable for keeping track of offsets

These offsets are needed for REF_DELTA objects, which encode which
object they use as a base, but not where it lies in the packfile, so
we need a list.

These objects are mostly from older packfiles, before OFS_DELTA was
widely spread. The time spent in indexing these packfiles is greatly
reduced, though remains above what git is able to do.
Merge pull request #1388 from carlosmn/hash-ref-delta

indexer: use a hashtable for keeping track of offsets
Fix a few leaks

`git_diff_get_patch()` would unconditionally load the patch object and
then simply leak it if the user hadn't requested it. Short-circuit
loading the object if the user doesn't want it.

The rest of the plugs are simply calling the free functions of objects
allocated during the tests.