Made README commands clearer.
updated readme
Merge branch 'master' of https://github.com/GitMachines/gm-centos6

* 'master' of https://github.com/GitMachines/gm-centos6:
  Made README commands clearer.
Adjust README to statedecoded
Start security section in README
Add Please check branches for activity
Merging Blaine's and Ikjae's branch
Updating the READ.md with the latest commit
Added MySQL DB and user permissions, cleaned up, and added comments.