Deleted gt.quality. Added functionality to gt.filter
Merge branch 'develop' of ssh://fenris.ti00a1.pcb.ub.es:7999/gt/gemtools into develop
Merge branch 'develop' of ssh://fenris.ti00a1.pcb.ub.es:7999/gt/gemtools into develop
GT-63 Updated retriever calls
GT-64 Removed hash command and hash option from indexer
Fixed type
Fixed type
GT-74 changed merge function and removed merge. Updated build to
incorporate tools. Updated indings and removed merger function
Added gt.menus data structures & accessor/printers
Modified gt.filter as to have an rna filtering step
Merge branch 'develop' of ssh://fenris.ti00a1.pcb.ub.es:7999/gt/gemtools into develop
Merge branch 'develop' into GT-73-merge
Fixed menu adaptor
Merge branch 'develop' into GT-73-merge
Switched merge strategy and introduced simple merge python call
Fixed the junction overlap detection
GT-76 - added keep-unique option to disable filters for tempaltes with exactly one block
Added JSON
JSON typed (string -> number). FIX
GT-75 basic filtering added
GT-75 added split map filter to transcript mapping step