Starting revamp on reference genome management
Integrating galaxy genomes download, local version, without fabric dependency
Added chapmanb local version of galaxy rsync genomes download script
local-ification or de-fabric-ation works. Needs some cleanup though
De-uglification finished
More cleanup, refactoring on software vs reference files for tomorrow
Moved utils to toplevel package, not tests, updated classifiers
Import errors and issues with namespaces: http://stackoverflow.com/questions/15161277/python-c-ext-namespace-mixed-with-regular-python-submodules
Possible namespace clash with facs package and module. Separating them as per @pfreixes suggestion
Merge branch 'develop', remote-tracking branch 'origin'
Adding @pfreixes suggestion on __init__.py and imports
Fixed init function. Now import works
Merge branch 'develop', remote-tracking branch 'origin'
Testsuite refactoring [ci skip]
twobit decompressing logic, more changes to come
Makefile changes
Merge pull request #2 from tzcoolman/master

scoring system change
Basic tests pass again
1000 genomes test fixed
Adding human genome, OOM in a virtual machine, only has 384RAM according to vagrant