Pass arguments from safeRun.sh to run.sh

The `run.sh` script takes an argument `-s` to determine the path to the `settings.json` file.

When using `safeRun.sh` you need to give a path to the log file, but other arguments are ignored instead of being passed on to `run.sh`.

After applying this patch arguments to `safeRun.sh` after the logfile path are passed on to `run.sh` so you can call 
```
bin/safeRun.sh /path/to/log -s /path/to/settings.json
```