updated ur submodule to d1040b5
use arrayref consistently for chromosome_list
add BedPe reader
add support for has_many properties
updated ur submodule to b4a80ca
Add back sublist functionality to annotate genes by category
Merge branch 'fireteam2' into gb_master
Revert "Revert "increase requested memory from LSF for the Pindel job""

This reverts commit ae85328fac9d683aa4f16942476cd1bece9da696.  Hacks on
hacks.
Updated class browser cache.
Updated `genome` tab completion.
Updated `gmt` tab completion.
add doc explaining crazy memory request
Added a new command to validate builds
Added a command to validate model groups.
Merge branch 'ccsvcf' into gb_master
Added no_commit, dummy_ids
Merge branch 'ccsvcf' into gb_master
updated "genome model copy --recurse" to avoid redundant copies within a given recursive copy event
Updated class browser cache.
Updated `genome` tab completion.