Merge pull request #1 from hwreeves-USGS/master

Assign_and_Route.py is a script that replaces assignriverelev and the tw...
Merge pull request #2 from hwreeves-USGS/master

added latex file on optimization
enforce cont. segment numbering; output flows to SFR file
Merge branch 'master' of https://github.com/aleaf/SFR
Revised the join of VAA data to flowlines in SFR_preproc.py to omit non-matching records. This also speeds up the join quite a bit
Added a log file to SFR_prepro.py
Cleaned up a bit of printed output and logging in SFR_preproc.py
Merge pull request #3 from mnfienen/master

Revised the join of VAA data to flowlines in SFR_preproc.py to omit non-...
Added a new file SFR_arcpy.py to hold general functions that combine
   various arcpy commands like macros. Currently, only added a faster
   version of join called general_join that keeps only common fields
   and saves down the join. It's faster than JoinFeature_management.

Other changes on this commit are implementing the general_join in a few places
   and removing the compute_zonal function from SFR_preproc.py. It was not
   typically being used anyway.

   Also added a join into the Finalize script to bring in row and column into
   rvier_explode.shp from the model grid if it's missing.
Merge pull request #4 from mnfienen/master

Started a new file for arcpy macros, and a few other changes.
Added a program Check_Stream_Routing.py that verifies that all routing is
acceptable (e.g. reports if some segment connections are very distant). Also
checks for circular routing, although this might need some QC.

Other mostly cleanup changes to the other scripts.
Merge pull request #5 from mnfienen/master

Added a program Check_Stream_Routing.py that verifies that all routing i...
added to repo. Computes avg. elevations from DEM and joins to model grid cells
Update README.md
reinstated section of computeZonal.py that references SFR_setup.in file
Merge branch 'master' of https://github.com/aleaf/SFR
improved plotting of worst floating/incised segments; set defaults for Fix_ends and Fix_routing to False (good to first do a run with these turned off, and then compare)
Update README.md
Update README.md
Updated README.md with most recent updated script sequence and new names. Some of Andy's fix codes were removed because not clear at which point they should be run. Andy may want to add them back in.