init commit
added gene class,minor MDL metaprogramming code
added network class
init commit for template.psc
added sensor protein interactions
implemented atp in template
Added the reactions for genes U,V and Z
Merge pull request #1 from stiffin1/master

update
removed windows newlines
defined alpha, beta, gamma
init commit for gitignore
ignore parsetab
init utils
fixed a bunch of errors in template
init commit for chromosome, ga
added zipwith function
added iteration and other methods
recombination and mutation operations
Merge branch 'release/minimum'
added transpose function