state_equation_parameter, measurement_equation_parameter, transition_prob_parameter and prior_parameter are no longer CMSSM members. Instead, they are now inheret to RationalExpectationEquationFunction, StateEquationFunction, MeasurementEquationFunction, TransitionProbFunction and PriorDistrFunction
InverseGamma has problems
gsl_ran_gamma_pdf is used to be consistent with Tao's fn_logpdf_gamma and fn_logpdf_invgam. See PriorDistrFunction_test_1st notes
LogLikelihood and LogPosterior are consistent between C++ and Matlab code
working and consistent with Tao's first version
consistent with MatlabEst3
data and initial value
Tao's best solution stored in matlab.ini
mpi run, multiple iterations, starting from a initial file or random seed, continuing refining for a number of iterations
not tracking result
fixed some small bugs
some changes have been applied to priors
SmallModel_Simulation coded up, but not tested yet
new problem appears: some blocks do not need to be adjusted at all
Metropolis-Hasting now works
new data
new data comes in
changed according to equi_energy_generic_interface:bin_adaptive. See bin_adaptive.readme of equi_energy_generic_interface
MH works but equi-energy does not seem to.
CEESParameter: no h0, add THIN (I), change n_initial(I) to n_initial(S), change deposit_frequency to thin