update FFMPEG to 0.11.1
added additional dependencies; moved java to dependencies.
updating gitmodule location
more fixes for conf.py.example
command is "start" not "run"
updated readme to add gpg setup info
added pubkey export info
the submission dump should be under /logs
added basic setup script to automate init
Merge pull request #4 from n8fr8/master

Critical updates for clean install on new system