ENH: Parameter file for Tube enhancement and extraction

Change-Id: I50ade2476cb3141640b3a736d598f831eee76cd6
BUG: Writing too many chars in strings in Base/IO/itkTubeMetaTubeParams

Change-Id: Ia259fcaf1063cec91c425480ee601374e80be98d
ENH: Baseline implementation of SegmentTubeSeeds implementation

Change-Id: I315aae0fc704fe48a7bbdbe6a863ffb0d44f2418
ENH: Added 3D test to RidgeSeedGenerator

Change-Id: Ibc78f454eb33fef62d33594beb6ce6f35c574bac
ENH: Method for RidgeSeed parameter IO

Change-Id: I1832962e883550299e7655a2831e418721c2abf5
BUG: Was not storing correct image type tag value

Change-Id: Iba2f34524a819789c5bfc9f39c80ffd6f03006e5
ENH: Increase numeric precision of mean/covar calculators

Change-Id: I8a558c82f1e825be960e4770f7a555ecca7cce05
ENH: Added intermediate class for feature vector generation.

This class is intended to be used by basis function generators,
classifiers, and PDFSegmenters

Conflicts:
	Base/Segmentation/Testing/itkTubeRidgeSeedSupervisedLinearBasisGeneratorTest.cxx

Change-Id: Id0a3ac472f056edf160e49eed861e8d52b134db9
ENH: Added intermediate class for feature vector generation.

This class is intended to be used by basis function generators,
classifiers, and PDFSegmenters

Change-Id: Id0a3ac472f056edf160e49eed861e8d52b134db9
ENH: Generate a sub-basis of a feature space

Change-Id: I325257b229ff734f9838af3170b4d7f11679e4e9
ENH: Basis feature vector generator tests pass

Change-Id: Icc6549256cd3d482c60afc9c5d214f51a2ddc1af
ENH: NJetFeature and NJetBasisFeature baseline images added

Change-Id: I580f91d6f15cc002eaee21eb160af30b234c3f76
ENH: Ridge and RidgeBasis feature generation

Change-Id: I07cb93f26045122837b5bf2e16db177cb372fb18
BUG: Spelling mistake in header, and missing membervars in prinself

Change-Id: I4be5cfda312a2ce3dd86503b5fdc6cda5c1aa6e2
STYLE: Missing spaces after commas

Change-Id: Icf688b28253f155e4185e6ed3e23f3365c62ad42
ENH: RidgeSeedFilter initial implementation.   Needs PDFSegmenter update

Change-Id: Iac97ab77f6fb0fb73059cd575515d1f79caef2d5
STYLE: Applied recommended changes from gerrit review

Change-Id: Ib54ef6ae8a9bbb6132ae44af60a4b3bf0be4c3e1
Merge branch 'master' into TubeApp

Conflicts:
	Applications/EnhanceUsingDiscriminantAnalysis/EnhanceUsingDiscriminantAnalysis.cxx
	Applications/EnhanceUsingDiscriminantAnalysis/EnhanceUsingDiscriminantAnalysis.xml
	Applications/EnhanceUsingNJetDiscriminantAnalysis/EnhanceUsingNJetDiscriminantAnalysis.cxx
	Applications/EnhanceUsingNJetDiscriminantAnalysis/EnhanceUsingNJetDiscriminantAnalysis.xml
	Applications/SegmentTubeSeeds/CMakeLists.txt
	Applications/SegmentTubeSeeds/SegmentTubeSeeds.xml
	Base/CLI/Testing/tubeCLIHelperFunctionsTest.cxx
	Base/CLI/tubeCLIHelperFunctions.h
	Base/Common/tubeTestMain.h
	Base/Filtering/Testing/tubeBaseFilteringHeaderTest.cxx
	Base/Filtering/Testing/tubeBaseFilteringPrintTest.cxx
	Base/Filtering/Testing/tubeBaseFilteringTests.cxx
	Base/IO/Testing/tubeBaseIOPrintTest.cxx
	Base/IO/Testing/tubeBaseIOTests.cxx
	Base/IO/itkTubeMetaLDA.cxx
	Base/IO/itkTubeMetaLDA.h
	Base/IO/itkTubeMetaNJetLDA.cxx
	Base/IO/itkTubeMetaNJetLDA.h
	Base/Numerics/CMakeLists.txt
	Base/Numerics/Testing/CMakeLists.txt
	Base/Numerics/Testing/itkTubeNJetFeatureVectorGeneratorTest.cxx
	Base/Numerics/Testing/itkTubeNJetLDAGenerator2FTest.cxx
	Base/Numerics/Testing/itkTubeSupervisedLinearBasisGeneratorTest.cxx
	Base/Numerics/Testing/tubeBaseNumericsHeaderTest.cxx
	Base/Numerics/Testing/tubeBaseNumericsPrintTest.cxx
	Base/Numerics/Testing/tubeBaseNumericsTests.cxx
	Base/Numerics/itkTubeLDAGenerator.h
	Base/Numerics/itkTubeLDAGenerator.txx
	Base/Numerics/itkTubeNJetImageFunction.txx
	Base/Numerics/itkTubeNJetLDAGenerator.h
	Base/Numerics/itkTubeNJetLDAGenerator.txx
	Base/Numerics/itkTubeNJetLDAGenerator2F.cxx
	Base/Numerics/itkTubeNJetLDAGenerator2F.h
	Base/Segmentation/Testing/itkTubeRidgeSeedSupervisedLinearBasisGeneratorTest.cxx
	Base/Segmentation/Testing/tubeBaseSegmentationHeaderTest.cxx
	Base/Segmentation/Testing/tubeBaseSegmentationPrintTest.cxx
	Base/Segmentation/Testing/tubeBaseSegmentationTests.cxx
	Base/Segmentation/itkTubeLabelOverlapMeasuresImageFilter.h
	Base/Segmentation/itkTubeLabelOverlapMeasuresImageFilter.txx
	Base/Segmentation/itkTubeOtsuThresholdMaskedImageFilter.h
	Base/Segmentation/itkTubeOtsuThresholdMaskedImageFilter.txx
	Base/Segmentation/itkTubePDFSegmenter.h
	Base/Segmentation/itkTubeRidgeSeedGenerator.h
	Base/Segmentation/itkTubeRidgeSeedGenerator.txx
	Utilities/Testing/CMakeLists.txt

Change-Id: I3d1c6c4c11addb779e10ac3349f689b3e48e3e9f
Merge topic 'TubeApp'

5164dd9 Merge branch 'master' into TubeApp
f1f6410 STYLE: Applied recommended changes from gerrit review
b073866 ENH: RidgeSeedFilter initial implementation.   Needs PDFSegmenter update
aee7629 STYLE: Missing spaces after commas
10d84a0 BUG: Spelling mistake in header, and missing membervars in prinself
ec19247 ENH: Ridge and RidgeBasis feature generation
94c6e67 ENH: NJetFeature and NJetBasisFeature baseline images added
a2522e3 ENH: Basis feature vector generator tests pass
aab8260 ENH: Generate a sub-basis of a feature space
41c032c ENH: Added intermediate class for feature vector generation.
838c56d ENH: Added intermediate class for feature vector generation.
9687679 ENH: Increase numeric precision of mean/covar calculators
53a2af4 BUG: Was not storing correct image type tag value
3baef19 ENH: Method for RidgeSeed parameter IO
b481d7e ENH: Added 3D test to RidgeSeedGenerator
61002a1 ENH: Baseline implementation of SegmentTubeSeeds implementation
...