Fixed the RewriteCond in the .htaccess
Set default timezone to UTC
Work in Windows with file path length more than 255 chars
Fixed setting the unique name for object
Table "trees" was deleted and were created tables "parents" and "protos". Sql queries were changed.
Some changes in code for working with linked objects
New queries files for working with database (deleting objects, finding duplicates, updating count of parents)
Create a package "/Library/javascripts" and moved it all the javascript object
Fixed arranging objects
Fixed using dependents of the javascript object
Updates database. Use linked objects
Fixed paths to Library/javascripts