simplify file exist checks
fix wrong argument name
implement the new two modes: bins and BED-file
use more macros
add dynamic scheduling to the wrappers using the new GALAXY_SLOTS feature
fix for an ugly copy and paste error
Use macros to reduce reference duplications.
Use macros to reduce output-settings duplications.
Use macros to reduce effective Genome size duplications.
remove obsolete species tag
Use macros to reduce cheetah duplications.
Style fixes.
Use macros to reduce cheetah duplications.
Use macros to reduce the duplication of multiple input bam files.
style fixes
add help images
initial work on galaxy wrapper help update