BUG: enable reading of GE DWI trace multi-volumes, which was not possible to properly read using any existing functionality of Slicer


git-svn-id: http://svn.slicer.org/Slicer4/trunk@22161 3bd1e089-480b-0410-8dfb-8563597acbee
BUG: #2326 remove storage nodes for sample data downloads

Since the download is in a temp directory, make sure the user
is prompted to save when saving the scene.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22162 3bd1e089-480b-0410-8dfb-8563597acbee
BUG: Fix origin&directions in CreateADICOMSeries - Update ITKv4 project

This problem is captured by issue #2945 and the associated fix has been
pushed to ITK master.

During developer hangout of July 9th 2013, we discussed [1] what could
be the approach to build against a version of ITK including
commit df661440 without risking to break Slicer including new ITKv4 feature.

We concluded that working with ITK maintainers so that a patch release
ITK v4.4.1 including a list of carefully selected [2] commits is created was
the most reasonable approach.
Doing so ensures that only bug fixes are considered in the updated
version of ITK build by Slicer.

This commit update the ITKv4 external project so that the release
branch that will soon become ITKv4.4.1 is considered.

More particularly it include commit 9fa55c [3] fixing Slicer issue #2945

Fixes #2945

Co-authored-by: Matt McCormick <matt.mccormick@kitware.com>

[1] http://www.slicer.org/slicerWiki/index.php/Developer_Meetings/20130709#Conclusion
[2] http://www.itk.org/pipermail/insight-developers/2013-July/022922.html
[3] http://itk.org/gitweb?p=ITK.git;a=commit;h=9fa55c414d9000e467a57415329436e76356bebb

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22163 3bd1e089-480b-0410-8dfb-8563597acbee
BUG: Manually download distribute required for SimpleITK

Download distribute version required by SimpleITK's build directory to
be automatically detected by distribute_setup.py. The distribute
download from pipy has moved to a https URL. SSL is not yet supported by
Slicer's version of python. So we moved the download to midas and
manually get it.

From: Bradley Lowekamp <blowekamp@mail.nih.gov>

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22164 3bd1e089-480b-0410-8dfb-8563597acbee
ENH: Updating SimpelITK version to 0.7.0.dev54

This update to SimpleITK includes the following:
 Fix for mantis 3157
 Improved compilation time with parallelism
 Improved VS9 compiler check
 Windows numpy size conversions fix

Additional tweaks to external file include:
 Adding cmake flag to remove git hash for version.
 Adding cmake variables for git tag and url. Consistent with ITKv4 external
project description.
 Remove extra CMake module include
 Remove obsolete comment regarding unsupported shared library build. See r22133 [1]

[1] http://viewvc.slicer.org/viewvc.cgi/Slicer4?view=revision&revision=22133

From: Bradley Lowekamp <blowekamp@mail.nih.gov>

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22165 3bd1e089-480b-0410-8dfb-8563597acbee
ENH: load the module even if numpy is missing; addresses issue raised by JC


git-svn-id: http://svn.slicer.org/Slicer4/trunk@22166 3bd1e089-480b-0410-8dfb-8563597acbee
BUG: Fix VolumeProperty file reading with gcc < 4.2.2

http://gcc.gnu.org/bugzilla/show_bug.cgi?id=35397
Closes #3220

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22167 3bd1e089-480b-0410-8dfb-8563597acbee
ENH: Make volume property file reading more robust

* nextHigher does no longer produce denormalized values, it's error prone
* ensure values are are unique when reading from file
Issue #3220

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22168 3bd1e089-480b-0410-8dfb-8563597acbee