Add version 4 for the annotator as a valid value.
Merge branch 'master' of ssh://git/srv/git/genome
updates to _normalize_taxon
some bugfixes - this tool will probably be completely rewritten soon, but is at least somewhat useful right now
remove breakpoints, fix whitespace
drop the limitation on sv event type
rewrite IntersectSv.pm to use ensembl gene coordinates and add both partners
drop useless external_gene_id
making annotator version 4 the default
allowing version 4 of annotator as acceptable value
updating tests to use newer transcript version compatible with annotator version 4
fixing tests related to annotator version 4
Update test data for g m export

This tests really shouldn't be relying on production database entries
Updated test data for g m import metadata

This test should really stop depending on the output of g m export
metadata's test data
Extract function for removing ids and paths

And use it for both Failed and Unstartable