Florian Jug found a bug in the setKeepImg
Merge branch 'master' of ssh://fiji.sc/srv/git/imglib
Follow the SNAPSHOT version of mpicbg.jar

This also helps MiniMaven in the Fiji project which would otherwise
confuse 20111128 (the version inferred from the Scijava POM) to be a
higher version number than 0.6.0-SNAPSHOT and prefer the older version.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
imglib2-io: use new SCIFIO API

The stuff in loci-common migrated into scifio core, so we can use that
now for the most part. The only thing that hasn't made its way over yet
is the loci.common.services stuff, which currently resides in a
component called loci-legacy, which we depend upon for now.
imglib2-io: add explicit scifio-devel dependency

This project currently houses the ome.scifio.* packages, although that
will change in the future. But for now, we need a dependency on it to
avoid Maven warning us about a used undeclared dependency when running
the "mvn dependency:analyze" command.
imglib2-tests: use new SCIFIO API
synchronized set value to make planewise multithreading secure.

Before this change:
If one int (32 bit pixels) was shared between two planes it could happen that two threads (each processing one plane) wrote to the same int at the same time => one update got lost. This happened surprisingly often on small images.
makes compute method robust against empty images
OPS: derive statistical functions from abstract base class
OPS: undo commit of .factorypath
OPS: add license header to a file
OPS: Enhance statistical function support

No supporting both trimmed means and alpha trimmed means
A package for spot localization with gaussian fitting algorithm

Added a package to algorithms-gpl that contains algorithms for sub-pixel
localization of spots, motivated for instance by super-resolution
techniques.
For now, it just has an elliptical, othogonal gaussian peak fitter moved
from imglib1.
Signed-off-by: Jean-Yves Tinevez <jeanyves.tinevez@gmail.com>
An interactive test for gaussian peak fitting

Signed-off-by: Jean-Yves Tinevez <jeanyves.tinevez@gmail.com>
Changed out of bounds strategy for MorphOps
Gaussian peak fitting: add a JUnit test case to ensure behavior

Also refactored utility methods.
Signed-off-by: Jean-Yves Tinevez <jeanyves.tinevez@gmail.com>
Merge branch 'master' of pacific.mpi-cbg.de:/srv/git/imglib
EqualizeHistogram-operation now works for all real types.
EqualizeHistogram: fixed compilation problems
Renamed getPixel/setPixel in ListImg implementation to get/set.