Removes the usage of NNAtomContainer. Make the CDKManager use
SilentChemObjectBuilder instead.
Removes the usage of NNChemFile. Make the CDKManager use
SilentChemObjectBuilder instead.
Removes the usage of NNMolecule. Make the CDKManager use
SilentChemObjectBuilder and AtomContainer instead.
Removes the usage of NNMoleculeSet. Make the CDKManager use
SilentChemObjectBuilder instead.
Replace class with interface in calls to IChemObjectBuilder
Merge branch 'Bug3465' into develop