labofsahil/github-event-dataset-2012 huggingface dataset:
Merge pull request #1254 from VictorLowther/pull-req-master-3458157901

Dumbify Ubuntu's network handling [2/5]
Merge branch 'master' into hadoop-os-build
Add README for hetrogenous OS support.
Add updated submodule references for master
Merge branch 'master' into hadoop-os-build
Merge pull request #1289 from VictorLowther/pull-req-hadoop-os-build-44f3185aa1

Forward-port execute state changes from Fred, and add hetrogenous OS support. [7/7]
Merge remote-tracking branch 'origin/hadoop-os-build' into hadoop-os-build
Octopress init
Site updated at 2012-12-17 19:03:33 UTC
exit when inherited==variant in phaser
add Mongo class
added,updated,eleted file
Model continued
generated files
remove unused classes
display Usernames rather than IDs
how do I ignore this freakin file?
added README
Merge branch 'master' of github.com:gbuesser/fabease
Tweaked display options
Added in type column.
forex data input/output additions
Make mkcard executable
Zero-fill of BSS assumes aligned BSS section; force alignment!
Small cleanup
omap3_pm_idle: enables and disables FIQs
Merge branch 'android-dev' of github.com:gendalfas/hyparm
Fix GPMC revision
DM Timer reset value
Emulation of DPLL 5 lock mode
Added comment to DM Timer.
Merge remote branch 'henri/master' into android-dev

Conflicts:
	src/vm/omap35xx/gpmc.c
Added try/catch to proxy connector so it doesn't crash when something goes wrong
Hosting module and bug fixes
Hosting module and bug fixes
Backport options view from Django 1.5
Lunar forgot this and Manifest .gitignore
加入檔案.
done with the demo app
Improved the README
style changes for flashcard fullscreen
Fixed debugging messages to account that limit_zone was renamed to limit_conn.
clean up little bit
Added flattening API call and algorithm implementation.
Update framing algorithm using new flattening algorithm.
Add API for listing tasks/workers
Merge pull request #21 from glinscott/json

Add API for listing tasks/workers
Adds Gary Linscott to authors #21
fix in package generation
quickbaysig:typos
添加第5天要编写的内容。

开始已经有桌面雏形
add support for filtering based on layers, which correponds to tags in style.gss
removed the bloated description.
update express3 syntax in readme and example
rename frost to vm-frost
no more w3m
Merge remote-tracking branch 'refs/remotes/origin/master'
fonts: expand tabs
@Raphfrk requested changes

Signed-off-by: William Lebel <lebelwilliam@gmail.com>
Sync'd in-code state machine with FSM and added Hunt* recipe classes.
specify ip in nats installation
more formatting to rdme
add another error check to kumascript preview code

refactor template test for new preview UI
push unpushed branches
Update Guides/forking
v2.0.0 RELEASE_NOTES
wording
wording
Link to http://handlebarsjs.com/
Changed debug mode toggle to detect (by hostname) whether it is development or production.
changed .entry (all body text) to 14px/20px and removed the bottom border (thin line)
Remove bucket param from s3cmd template.
Gives number and length of fragments.
modifica per branch stampa4
Merge pull request #2 from gusela/stampa4

modifica per branch stampa4 (merged)
Fix ssd1306 display method to NOT reset the display start line,
and add sample code that uses vertical scrolling.
add full module path name to comments on each font.
файлик
добавнен вывод новостей на главной странице
Merge branch 'master' of github.com:gyzerok/DVLeague
Теперь рабочие ссылки на редактирование и добовление новости.
Первый шаг работы с командами. У нас есть страничка команд и возомжнойть ее создать
+ listExportExcelMode for hookdata
- nutsUserHasRight add parameter default
Rename from heatdirector to just h.
MINOR Formatting code text properly in changelog
version bump
minor fixes
less global stuff
refactor resetState
remove undoAll, more refactoring
Add explicit test for NotFoundException
Updated NEWfilename.md
improve title
small script to facilitate posting to blog
Rearrange test conf vars in bin/test.
Added latex-suite
Merge branch 'master' of github.com:haydnKing/dotvim
Fixes Issue #294
Added a regression test for SimpleGoodTuringProbDist to probability.doctest. Fixed another doctest. All tests in probability.doctest now pass
Merge pull request #295 from DrDub/master

Fixes Issue #294
Added Philly DevOps.
search answer using collocation only has been added.

utils.py has been created to contain the utility functions usefule
across different modules.
rm source that not usefull
terrible terrible bug that broke get_last
allow parsing of directories, fixes #256
fixed crashing bug if no file selecterd on plugin, added donate page
fixed bug with unlocking achievements/awards
fixed Adam's crap to work on Mac
- close beta 4
Big run of olin gal keck beckman
Updated Ember to the latest version with script load move
More roadmap notes
Add more matchers
Merge pull request #19 from hojberg/mo_matchers

Add more matchers
Core/Scripts: Fix Insanity and some achievements
chooseuser
* Clone skeleton from pdo_oci.
* Partly update for support all identifiers > 30 characters.
* Pass both schema and database_test with table/column > 30.
More work on the RE
Updated the license to reflect 3rd party libraries
Construct cpu0
Implement all the branch/jump ops. Made BNE/BEQ check the full 64-bit reg for now (optimisation is just to check low 32 bits)
Added generator header to all Bind generated files.
Added DebuggerNonUserCode attribute to wrapper classes.
Adding OUTPUT rule to be able to do git clone
优化
text git commit
test git commit
test git commit
test git commit
test git commit
tweaks, added toggle_wintitle.sh
ID: renamed test
1. 版本升到1.2
2. 随机可读字符组合，弃用以前算法
2012/3/31公開用 /mov から /candlemov へ変更
Baysean started
readme
happy logging...
Replace manual palette management with Palette and PaletteSet.
Also reconfigure SNESImage to use these classes.
Undo Test change
авторство
Added SQL Create Statements

Added SQL Create Statements and upgraded the Mysql class. Moved the
logging code from the example page to the Traffic class.
Bugfix:

Fixed the DatabaseTest: assertSame in assertArrayContentEquals results in a hidden autoboxing that results in a  possible == on two Integer Objects (only true for Integer i < 127). Now assertEquals is the solution. Thx @ Silvia for the bug report.
Fixed WF-1517
Merge branch 'master' of github.com:intalio/security
Further optimized the code by avoiding copying bytes to the local buffer when reading sufficiently large chunks and by restoring the IMPL hack
Unified the handling of CRLF chars in a new "_removeCRLF" function and optimized it by making use of the libc functions instead of reading the buffers on our own
support for binding custom data to select options
Refactored tag & group REST URLs, updated group UI
Ensure the login is in lowercase
Corrected bug on suggestions
Added a cache to the dayline
got rid of redundant slice tests
made inliner run only when there are function calls present
accidentally deleted test-tiling
Work on tiling.
refactored transforms to allow for generic descent over children, rewrote array lowering
got adverb semantics passing
proit-tools-2.77
Added null object for the empty library
Added carrier library
Moved null objects to rot
Moved library test to separate dir
Fixed autoload bugg
Started adding tests for Number
update
Merge branch 'master' of https://github.com/ithkuil/cureblog
daliroids ship can now move!
	modified:   daliroids.css
	modified:   daliroids.js
	modified:   laplace.js
Make reading of the password hidden
Testing interactive add
Wrong flag for ls colors
Update README.md

Minor cleanup while making the trial FSharpx GitHub pages (no content dropped, just clarified) and included instructions about getting the packages via NuGET.
Update README.md
Merge pull request #103 from funnelweb/master

Cleanup/clarification in README.md while making the trial FSharpx GitHub pages
Update README.md

Moving details about Async extensions to the wiki https://github.com/fsharp/fsharpx/wiki/FSharpx-Async-Extensions
Merge pull request #105 from funnelweb/master

Moving details about Async extensions to the wiki https://github.com/fsharp/fsharpx/wiki/FSharpx-Async-Extensions

self-merging
Update README.md

Just moving README material across to the home page, and leaving an indicator of how the home page can be edited.
Merge pull request #104 from jackfoxy/master

cleanup data structures interfaces
Merge pull request #106 from jackfoxy/IQueue-in-progress

3 new queues, 1 test module for queues
Cleaning the project description
As discussed with @tpetricek on twitter. For a lot of the users it would be easier to contribute to the TypeProviders if they would not use these custom operators. This is the first attempt of a clean type provider.
Moving back to the plain old type provider API for the regex provider.
Moving back to the plain old type provider API in the vector provider.
Moving back to the plain old type provider API in the XAML provider.
Merge pull request #108 from jackfoxy/IQueue-in-progress

LeftistHeap enumerable performance improvement
Moving back to the plain old type provider API in the file system provider.
Moving back to the plain old type provider API in the registry provider.
Moving back to the plain old type provider API in the excel provider.
Moving back to the plain old type provider API in the document inference helpers.
Moving back to the plain old type provider API in the xml document provider.
Inlining "createTypeFromSchema" in thx xml type provider
Fixes closing tag in help text for password field.
include calm function
adding a few new module images
[Makefile] better output
Ignore .DS_Store
Fix documentation
Update to 990px width
Just submitted to comp. Opened up to others through Hogwarts.
Refactor logger a bit
structured even more
Add wait loop in getTransaction function (inApp payment)
Added player url to search result list and did some minor refactoring
Scraping movie id and name from description
Added memcache support
Added memcachier gem
Add some Lispyscript-specific coloring.
More interesting words.
Merge pull request #332 from jbertram/master

Fix the documentation on direct-deliver
small tweak on Password Codec
git-ignore on rest/data
Merge pull request #333 from clebertsuconic/master

simple changes
HORNETQ-316 -- Pluggable Broadcasting/Discovery Support

    The work is a major refactor of the original work taken by Tomohisa and Howard

    Changes:

    1. Define a BroadcastEndpoint interface for broadcasting/receiving opaque data.
    2. The broadcast endpoint can be configurable for the server to use a different broadcasting/discovery technique than default UDP.
    3. Internally refactor the default broadcasting/discovery groups to use UDPBroadcastEndpoint.
    4. Add an jms example 'clustered-jgroups' to demonstrate clustering with a JGroups as the broadcasting/discovery mechanism.
    5. Add corresponding properties to HornetQResourceAdapter (ra.xml) to allow MDB's working with it.
    6. Add a test in FileConfigurationParserTest.
avoiding NPE on NodeManager after a server.stop (race condition)
speed up on tests
Merge pull request #334 from clebertsuconic/jgroups

Jgroups implementation and some speed up on tests
fixed netty distro addition and jnp-client
removed hornetq-logging from distro assemmbly
updated gitignore
fixed client jars to include correct jars and added hornetq-commons and hornetq-journal to assembly
Some concurrency fixes at the backup start-up cause a NPE here,
The issue is: the backup returns isStarted()=true, but it has no clusterManager yet.
Merge pull request #335 from andytaylor/master

several fixes for the release assembly build
Merge pull request #336 from FranciscoBorges/simple

Some concurrency fixes at the backup start-up cause a NPE here,
replication: add some Javadocs
Add myself as a manual author
Delete obsolete Ant build files.
manual: HORNETQ-973 some initial replication notes (work in progress)
Merge pull request #337 from FranciscoBorges/manual

Manual updates
enemies/trading.
Distilleries make everyone happy.
AS7-6013 Remote EJB invocations are read/written out one byte at a time
Fix AS7-6014. Make NamingContext.lookupLink(String) perform lookupLink not lookup.
Upgrade EJB client library to 1.0.15.Final
Add config changes for LDAP vcard and directory tests
Add start of algorithm file
Add ability to specify multiple gmond aggregators.
Add CLI usage documentation.
Emacs TODO
updated project to current pattern
clarified failure statement
Fix order button
Merge branch 'jim' of https://git.jim.sh/jim/nuggets
Implement sqroot_int

Computes the square root of an integer.

Two functions sqroot_int32 and sqroot_int64 are implemented
for 32 bit unsigned integer and 64 bit respectively.

A system specific square root function sys_sqroot_int64 is also
introduced which can replace calls to sqroot_int64.
The standard implementation is replaced with long double version
sqrtl on x86 processors - cause it is faster and the long double
version can handle up to 64 bits.

Other work:

* Rename abs_int into abs_int32 and adapt modules calling this functions
  (A generic implementation abs_int is without C11 _Generic not possible).

* Introduce generic log10_int which replaces direct calls to log10_int32
  and log10_int64.

* Correct documentation (rename wrong XXX_context into XXX_maincontext...)
insert data now ignores unknown properties instead of exiting
change uptime formatting, add class for telco
Merge branch 'master' of github.com:jeffmay/GabyBots
Added the db directory.
Use script for load and run addresses.
archive all going to frymanet
Passing application specific arguments to Client#request_token
remove underlining of menu items
Formatting
Implement prefix tree matching instead of simple hash map matching to support the more complicated nested branch points
Formatting
Updated nested branch point example
A rather large refactoring of the HyperDAG to move phantom vertices off into another layer of delegation. This now also supports 'internal' phantom vertices instead of just the 'leaf' phantom vertices that we supported before.
Make the GraphViz visualization a bit prettier / more concise
Changes to workflow package including supporting nested branch points and factoring out an entire builder package, which splits the builder into one component that munges the AST and another that converts an the resulting intermediate representation into a HyperDAG.
Add logging via Grizzled SLF4J and propagate changes from workflow package to the rest of ducttape.
Merge branch 'master' of git@github.com:jhclark/ducttape
Add an in-progress example of the switch-case statement being developed in #44
Branch point names use upper case
OSX/BSD doesn't have readlink
Update syntax highlighting for editors
Rename
The beginning of a Makefile to automate system-wide installation
Update syntax highlighting paths
Added support for automatic parsing for URL objects
Added FIXME about possible improvement in Path
Fixed LINT error
testing file t
Merge branch 'master' of https://github.com/jhonnyguzman/sac
Refactorizacion de codigo completo. Validaciones varias agregadas.
Se añadio validaciones extras. Se añadio apartado de consultas generales. Nuevo backup de la bd creado.
agregado validaciones extras
Removed unnecessary NSLog

Test commit and push
Support the old country_select API for compatibility with various libraries
Made the $files class variable private in the Config class
New Features:

+ Added (add_content) function.
+ Added Error page functionality (blank)
~ Made main navigation above header as standard (default layout)
added first exercises
Added columns in invoice search result page
Fix LOGGING dict in geonode/settings.py to match dev
Remove fileupload static dir (in a separate branch)
removed bash-support vim bundle
initial commit
quite gitignore
Regularise manual page headers and footers
Fill gaps in operator << and >> exception handling

Introduces a new setstate_maybe_rethrow() abstraction that reduces
the amount of repeated boilerplate code in each operator.

Also completed some stream.h documentation.
Make samstreams closeable and reopenable

Introduces default constructors (which create closed streams)
and open() methods.  [IO]Samstreams now throw exceptions by default,
including on failure to open files.  Also adds osamstream::flush()
and correctly flushes when osamstreams are closed and/or destroyed.

(Having a default constructor allows for C-style arrays of samstreams.)
Take advantage of recent samstream changes

In particular, failbit|badbit exceptions are already set by default,
and constructors throw an exception themselves on open failures.

This changes the behaviour of samcat when reading fails: previously it
would fail immediately with an error message, now it prints a message,
continues with any subsequent input files, and then fails.

Introduces a Boost dependency (scoped_array) for samsplit.
Explicitly prevent copying and assignment

Making this explicit for the samstream classes (rather than just
depending on the parent std::ios being noncopyable) can improve
the compiler diagnostics when copy construction etc is attempted.
jsonrpc: use CFileItemPtr instead of CFileItem in FillFileItem() to fix crashes
cosmetics: get rid of unused variable
[input] adds fallback map to CButtonTranslator
[input] factor out repeated code in TranslateJoystickString
[input] use fallback windows for translating 'joystick' or gamepad buttons into actions
[input] adds support for WINDOW_FULLSCREEN_LIVETV handling to GetActiveWindowID for gamepad and 'joystick' devices
[input] also use GetActiveWindowID for mouse input
[input] use shared/unified method to trigger an input action and remove code duplication
Added unit tests and updated documentation.
Appariement
-- added a way to to the map reduce feature merge with multiple reducers using TotalOrderPartitioner
-- changed rule file formatting output
-- fixed bug in Extraction when no option bloom filter
started a retrieval sentence by sentence. some refactoring.
Condense piece update events into one.
Minor cleanup.
Fixes and cleanups in Board.
Add PlayerStatusLayer.
Merge branch 'master' of github.com:jneem/clashadash
Merge branch 'master' of github.com:jneem/clashadash
=makefile :added to the clean option to delete *.o, *.a ans tools/*.a; core.h: now using the path afs for root files
Clase iOS 5 Version 0.1
updated seed data and messing with declarative logic
hola profe
Update jquery.mowdul.css
moving psd files out of res folder
Don't generate backups after merge.
Adding Subscription_model->subscription_list() and Payment_model->billing_info(), and replacing calls to old methods in Payment->dashboard().
Adding Curly->account_code property. Changes __construct() to accept account_code or NULL. index.php calls Curly with an example e-mail address.
Removing unnecessary error_logs.
Fixes Curly->config() bug: broken because in_array() tests against value, not key.
Add sustain files
added syntasic
Small cleanups, notes
start working on linked list
start working on linked list.
Working on the git hooks issue. #13
Fix documentation formatting in referencing namespaced classes.
Add support for benchmarking processes.
Add benchmarking during interchange.
Refactoring and docs for booting process
Print relative names on tasks
Apparently a grammatical error is worth a commit
Naloga 11 for Modelska
Position: Added tests for flipfit.
updates to take home
Working on Blackberry build scripts.  Client still isn't done, but close.  Need to delete assets on app delete and then update Android and iOS to function the same way.
Working on blackberry build scripts
updating get_topo_s3 to use user_info()
Fix typo in code comment (Blame +komiga for this, I do).
Copy fork-me badge to assets folder
Suporte a matriz - declarações
Suporte a receber strings em atribuições
Exclude half time article from project 52 overview page.
acertando areaflowLibrary
added 'Motiv One - Cosmik' to chilldnb
rest of jsp files
Added debugging statements to Motor
Removed the Constructor.
Removed the debugging statements.
INT: Projeto inicial Metro e WinRT.
INT: Classe AsymmetricKeyPair para guardar tokens.
Move towards adding display, and wiring.
adjust for the actual UI panel
Updated to SFML2.0 and made out-of-source CMake files.
Added shell convenience functions for launching tmux sessions
Adjusts constants, fixes problem when kick.h wasn't set.
Switch Facebook auth via client (popup)
Hide header nav in Landing page. Move unique JS to Landing page.
Username max 30 chars
fix some icon paths for *nix hosts
add multiple queries to positions.php
fix SQL, add page titles for map.php
[#2640] No longer check width half for droppables. Not sure why we need to do this.
[#2600] Stop potential security crash when dragging filesystem images over droppable containers.
[#2588] Prevent loading spinner from endlessly spinning
[#2676] s/cannonical/canonical/ in embed.js
[t2545] Added license to webmakernav
Bug 2702 - Remove X-Requested-With header check
[#2681] Wrong error message for max image count
[#2495] Limit Author/Project Title in embed.
Also fixed regression in header for long project names
[#2644] Fix toggling the editor pane to always update the timeline.
[t2492] Added UI for backup dialog

Wiring backend for backup dialog

Integrate Kate's dialog and rest of backend changes
  Author:    Kate Hudson <katehudsondesign@gmail.com>
[#2688] Updated project data to not have index in track names, and do not key track events to track name, track names are not unique, instead use id.
[#2647] Throw before we update.
Bug 2679 - Import "Stop and Frisk" project
[#2592] Prevent mouseup from firing blink on the track events target
[#2639] Prevent urls from being treated relative to the server
Bug 2692 - Update URI of our MIT license
[#2553] Remove obsolete custom naming for Layers. Fix up tests around them
[#2677] Fix positioning of butter header elements in Opera
[#2690] crash report should store media info
[#2684] Workaround for Firefox not implementing input type number and validation around it
[t1593] Added a fallback for youtube in shrink since resizing is not allowed
An experiment: convert the searchbox widget from jquery-ui to bootstrap OO model.
(Except, skip the 'optional semicolon' madness.)
Fix the logo spacing that occured in the top 3 layouts
save unchanged psp exports
move unused unit

they are accident added in, so remove them now.
k_ccflag's static url setting moved to k_cfg
change space lines to empty lines
change install_psp_obj.sql
change space lines to empty lines
add new unit to install_demo_obj.sql
Adapt to new language-features version
Initial commit for tmux configuration file.
Change the PREFIX key binding from C-b to C-z.
Change the default delay time.
Change the window and pane index.

As the default value for the window and pane index is 0
and it is not intuitive.

So, change the default value for the window and pane index from 0 to 1.
Add key bindings.
Disable the mouse-mode.
Merge branch 'tmux/init'
modify; move song-position by shortcut-key.
setup app icon for Mac.
remove submodule 'vsq' (to update repository URL).
add submodule 'vsq', with new repository URL.
Merge branch 'devel'
Modify ci-tool/run_cppcheck.sh, rename xml file name for cppcheck result
Modify ci-tool/run_cppcheck.sh, check header files
more phone nunber fix
Redoing the scrapper do to data urls going away
KITTENSBLOOP
Added an example deploy setting #4
Merge pull request #7 from kentaro/enhancement/#5-deploy-setting

Added an example deploy setting #4
ugly modify.
remove ET listen
Pushing db/schema.rb
Let nrepl-jack-in accept project dir when given a prefix arg.
Merge branch 'prompt-jack' of https://github.com/technomancy/nrepl.el into technomancy-prompt-jack
Fix argument order of plist-get to avoid squashing stderr/stdout results for sync evaluations
basic stdin handling
Merge branch 'master' into stdin
Update normalizer
Merge branch 'master' of github.com:kipcole9/traphos

Conflicts:
	config/initializers/normalizer.rb
Refactor normalizer
Change extensions migration
fix merge
Merge branch 'master' of github.com:kipcole9/traphos
Only load Thing if table exists, helps when we're migrating in an empty database
Cucumber died
new aliases in zshrc
update readme with travis image fix
Fixed Text::shorten multiline
Merge remote-tracking branch 'origin/master'
Merge branch 'master' of https://github.com/klawd-prime/lean

History fix
Merge branch 'master' of https://github.com/klawd-prime/lean
History
Se cambian los nombres de los objetos, y la descripcion de la
transaccion ahora estan en json
mixer.random
removed redundancy in exists
Updated background I guess...?
Correct the certificate for the app store
Solid 3G/wi-fi switching.  Reliable, but very noticeable.  Need to fix.
Fixed play button
Increased buffer size
Fix headphones unplug issue again
Get rid of that damn user state
Gitignore
More gitignore
Merge branch 'master' into requests
Thermistortable 7 without thermistor shows 5 C, add an safety point with 0 C
vimrc support for deleting line below cursor
Merge branch 'master' of git@github.com:kmanalo/dotfiles
Node ratio fixed
レイアウト統一 小田
omit empty branches
Fixed language bug.
recommitted whole lib due to git fart
added _allow_foreign capability to outies
Reduced duplication in DotFile
index.php added
index.html added
index.html added
a
removed extra sencha stuff
Adds proxy support
Adding wikipedia feature
Time Out for Terminology
added a part of some code for rel_jump in probe.
1) Added CpuVerify c# code
Merge branch 'master' of https://github.com/lachesis/backsub
use makefile for install.
show upload area only if user has rights to upload file
fixed missing ordering of results
Adds moono skin.
Improved openGL rendering performances
making better dependency between modules and better package name
univiersal..
better RESTfull mappings
ENH improve example
Fixed bug that call to user function failed in finally block
remove url helper hack
bump version
Cancelamento de pedido
Added xsessionrc file
put cron back to timeout 1s, revisit later
update version
first commit
Merge branch 'master' of https://github.com/lefraso/trans_bl
improve pom, README and fix live test
animal and moving animal!
Re-ordered resources on odds pane
Phylo.Applications: Added a wrapper for RAxML (Feature #3218)
NEWS: summarized recent changes in the Phylo module
Added unit tests for Phylo applications: PhyML, RAxML
Use one unit test file per external tool (for skipping tests)
Correct RAXML example output
Use doctest for RAXML (like Bio.Align.Applications doctests)
Refactor CodonUsage style according to Pep 0008, including:

 - whitespace
 - variable names
 - variable casing
 - spelling
 - comments:  removed duplicates
 - simplified math expressions
revert name changes of public variables
Should have removed this when added test_phyml_tool.py & test_raxml_tool.py
Basic PhyML detection in unit test (except Windows)
Conditional testing of Bio.Phylo.Applications wrappers
Stricter about closing handles in test (seen PyPy run out again)
Stricter about closing handles in test (PyPy can still run out)
Address more potential handle leaks under PyPy or Jython
Phylo.Applications: Correct the homepage URL for RAxML
test_raxml_tool: read RAxML_result.* instead of RAxML_bestTree.*

Both are created by and apparently the same in RAxML 7.2.X+, but in the
widely-used older version, 7.0.4, only RAxML_result.* is created.
Moved data input to constructor, added docs
Import C lexer or Python lexer.
Phylo.draw: take the default line width and font size from pyplot.rcParams

Suggested by Tanya Golubchik.
Phylo.draw: explain rcParams in the docstring.
Merge branch 'master', remote-tracking branch 'origin'
Start unit test for MMCIF.
Minimal unit test for MMCIFParser.
Handle missing C extension MMCIFlex gracefully in test_MMCIF.py
Thank Lenna (for MMCIF test)
Python 3 fix to MMCIFParser.py (but still needs C extension)
Fix missing import reported by John Comeau (closes Issue 3335)
Phylo.draw: new argument 'branch_labels' (Feature #3336)

Also simplified the way font sizes are set, for better customizability via
matplotlib.
Added "smoke test" unit tests for Phylo.draw and draw_ascii
Catch misuse of external feature locations as if they were local
Downgrade unrecognised GenBank/EMBL feature locations to a warning
Fix minor typo in Tutorial PDB example
Merge branch 'master' of git://github.com/biopython/biopython into MMCIFlex

Conflicts:
	Tests/test_MMCIF.py
switch dev env to postgres
Just iPhone for now.
Convert README to markdown
Add how-to link to JS events
Reorganize builder_spec
Fix association detection in #link_to remove #190

This regards situations when class name of an association
have been set up manually.
Catch possible missing association in #link_to_add
Merge pull request #192 from nashbridges/link-to-remove-fix

Fix association detection in #link_to remove
failing test for #49
Merge branch 'master' of https://github.com/groe/nested_form
fit sparse score complaint
Force the HTML 5 doctype in rendered pages.
Merge branch 'fix-doctype'
Fix the link of the current article.
Merge branch 'fix-relative-article-link'
fix tab indicator.
Update documentation for asynchronous events.
Tell Cinnamon when a window is activated outside the active workspace
fix bug on pair
switching book.pdf to LinuxFun.pdf in the working_with_files practice and solution
removing in the working_with_files practice and solution (thanks Brad)
typos working_with_files practice and solution (thanks Brad)
adapted changelog
cache类取消connected属性
modified client.py to test get all tenant's LBs

Change-Id: Ibc07c9d2ad339ddff58330cf06a1af6315750b05
Make register FP allocatable if the compiled function does not have dynamic
allocas.



git-svn-id: https://llvm.org/svn/llvm-project/llvm/trunk@156458 91177308-0d34-0410-b5e6-96231b3b80d8
Use ptr_rc_tailcall instead of GR32_TC.

The getPointerRegClass() hook will return GR32_TC, or whatever is
appropriate for the current function.

Patch by Yiannis Tsiouris!

git-svn-id: https://llvm.org/svn/llvm-project/llvm/trunk@156459 91177308-0d34-0410-b5e6-96231b3b80d8
Revert the majority of the next patch in the address space series:

r165941: Resubmit the changes to llvm core to update the functions to
         support different pointer sizes on a per address space basis.

Despite this commit log, this change primarily changed stuff outside of
VMCore, and those changes do not carry any tests for correctness (or
even plausibility), and we have consistently found questionable or flat
out incorrect cases in these changes. Most of them are probably correct,
but we need to devise a system that makes it more clear when we have
handled the address space concerns correctly, and ideally each pass that
gets updated would receive an accompanying test case that exercises that
pass specificaly w.r.t. alternate address spaces.

However, from this commit, I have retained the new C API entry points.
Those were an orthogonal change that probably should have been split
apart, but they seem entirely good.

In several places the changes were very obvious cleanups with no actual
multiple address space code added; these I have not reverted when
I spotted them.

In a few other places there were merge conflicts due to a cleaner
solution being implemented later, often not using address spaces at all.
In those cases, I've preserved the new code which isn't address space
dependent.

This is part of my ongoing effort to clean out the partial address space
code which carries high risk and low test coverage, and not likely to be
finished before the 3.2 release looms closer. Duncan and I would both
like to see the above issues addressed before we return to these
changes.

git-svn-id: https://llvm.org/svn/llvm-project/llvm/trunk@167222 91177308-0d34-0410-b5e6-96231b3b80d8
Teach Type::getPointerAddressSpace to look through pointer vectors
politely and document this feature.

This simple API extension then allows us to write all of the
Instructions' address space query methods much more simply. No
functionality change intended here.

git-svn-id: https://llvm.org/svn/llvm-project/llvm/trunk@167223 91177308-0d34-0410-b5e6-96231b3b80d8
add initial image upload functionality with paperclip
finish image viewing on show and edit article
add devise gem and generate devise install
configure app for Devise
generate devise for User model
migrate db for devise
delete public index page
Update build.properties

Updated Kettle and XUL dependency versions for 4.8 nightly suite release builds.
Init commit. Add several files
Merge pull request #1 from Bankq/dev

Init commit. Add several files
Added support for displaying issue groups as a column in issue list
Using datetime for date formatting
ghi-add Issue #140d0de: Not storing issue dates including timezone... should be.
Added groups field to full issue display
Resolving compile issue with image3d_to_tet
some more fixes for the show pages
fixing cukes
NOTE: DO NOT PULL THIS ON PRODUCTION TILL FURTHER NOTICE asset pipeline
WIP Merge branch 'rebased-asset-pipeline'
WARNING: DO NOT PULL TO YOUR POD- asset pipeline not in readme.
move handlebars templates for asset pipeline
User can select Night and Day Moods

headline method on post

extract headline and body from post, at first newline

Night Mood
fixes for jasmine
turn asset pipeline debugging off

there was a collision with the aspects-dropdown view in the new
publisher, also
it takes too much time with it on
add bootstrap dropdown
punycode.js is required by our javascript

The punycode.js file was somehow removed from the repo. This
replaces it with the current version from github and adds it
to our main.js manifest. Our javascript requires punycode for
(at least) stream rendering.
Stylesheet naming issue (new-templates.css)

Replace all references to new_templates.css with the correct filename,
new-templates.css
Merge branch 'master' into despora
Multiple sliders

Multiple the-slider galleries is now possible to have on the same page.
Couple of css tweaks.
added comment for ambiguous setTimeout
test.php hinzugefuegt
Added tests for mutable graph and fixed mutable implementation of graph.
V3.27.02
V3.27.03	
V3.27.03
Keep the <build> section in the parent POM in the Debian packaging of the project
DOC Link to online docs
added rest env vars which are required but not unused
style stories
WoodenCrate was added
Bla bla
Merge branch 'master' of github.com:lunanoko/genova6
Remove superfluous setting
Fix python settings
Remove cmake
Update langs/wpp-it_IT.po
xml-plugin added
Adds hilighting for jade and go.
Make Vim recognise JSON files
Debugged color vars
09/03 update
removing undodir
Minor Spacing Changes
M-Viewer first upload
Merge branch 'master' of https://github.com/maharjan/mviewer
Situacao apartir do TEMPO ok

Parte de Situacao do veiculo OK
Fix unsafe pointer shift in bitmap_index
Fix memory leak in bitmap index (objc part)
Fix pill css
Added 'howto' pack domain template
Database description + development in progress
scsh: don't build in parallel
Fix warnings on SuiteSparse

Signed-off-by: Adam Vandenberg <flangy@gmail.com>
ngspice: build with xspice support

xspice provides compatibility with keyfeatures from spice2 which are
absent from spice3. This means many models available on the internet or
from manufactures which were written in spice2 will be compatible with
ngspice.

Signed-off-by: Adam Vandenberg <flangy@gmail.com>
Erlang R15B01
CouchDB: fix 1.1.1 download location
graylog2-server: add launchd plist

Signed-off-by: Adam Vandenberg <flangy@gmail.com>
graylog2-server: fix graylog2ctl

Signed-off-by: Adam Vandenberg <flangy@gmail.com>
node: backport for npm issue
cmus: add -isystem to CFLAGS for non-/usr/local installs

To satisfy configure script to check "mp4v2/mp4v2.h", add -isystem to CFLAGS

Closes #11513.

Signed-off-by: Adam Vandenberg <flangy@gmail.com>
doctor: skip Cellar checks if Cellar doesn't exist

Attempting to call certain methods on the Cellar before it exists,
such as realpath, would cause brew doctor to throw unnecessary "file
does not exist" errors. This was fixed once before, but new tests
have been added since without the appropriate checks.
cf. 0d28bc78d71590c8e8a5961d8d10e3d7d9b8822d

Fixes #5188 (again).
Webmarks loading from DB
Fixed webmarks loading from DB
Webmarks exported pprinted
Fix shadow on example code display.
give up on half-ass support for symlinks and just stop symlinking/copying on windows altogether - closes #71 - refs mapbox/tilemill#1757 and mapbox/tilemill#1714
Add failing test for setting a dictionary property (vs setting the value of a property variable)
Fix the function key bindings.
Merge branch 'master' of github.com:markjdb/dotfiles
added ability to specify which attributes to persist to the server, which fixes editing on the server hopefully
Revert "Update src/main/java/org/marssa/footprint/datatypes/composite/Coordinate.java"

This reverts commit c772959e308718fba24425bae330307e0393ae46.
elaboration now uses navigation template
tirando o ainda
netbeans 7.1.1
Finalized some headers and list styles
поправил заполнение CSRF атрибута при генереции
tango: авто-увеличение шрифта на широких экранах
added parens around GLOBAL_QUEUE_SIZE_MIN
Correction erreur latex
AView options
Merge branch 'new-models' of http://github.com/maxmaximov/wader into new-models
add field for nodes which indicates whether the node is finite or infite
log requests and issue proper 404
add Fallthrough middleware
clear script_name in Request when it is / and path_info is present
Colorized alias already exists.
Roughed out tweeting functionality.
Breaking logic up.
Merge again
Merge again and rebuild lua bindings
Merge again
Usage line for createluabindings.py
Merge 11-24 github with mcc patches
Merge 12-24 github with 'one shot' xib fix
CoreServices::getScreenInfo, Linux version fix: remove hard-to-compile gdk dependency; assume Linux is using SDL and jump straight to that solution.
First step mingw compatibility
Mingw compatibility step two
Fix getScreenInfo on Windows (remove vintage C)
Mingw compatibility step three-- includes mingw
Up to date regenerated bindings
Mingw compatibility step four-- includes near/far issue
Mingw compatibility 5-- fix some compile errors, still symbol issues in libPolycore
Remove unnecessary additions in PolycodeInclude
Roll back more unnecessary changes in cmake files
Further in mingw build (note: ExternalOpenAL.cmake change should later be caged to mingw-only)
More MSVC OR MINGW fixes
Merge mcc mingw changes with 1/05 github
Aftermath of 1/05 gihub merge
CHighscore class to store highest score in file.
Merge branch 'master' of github.com:mczar/vs_po_proj
Removed old code from renderer
Added PNG, JPG and DDS loaders. Close #16
Remove documentation from groupchat protocol source
Add not_participating! packet
Add a copy-pasteable git clone command to README
Add some missing Javadoc.
Update
Update
expand local_repo before using
daniel changes, new favicons
Readded gitignore and deleted SUO, BIN and OBJ
Structure + started Module and ModuleFactory classes
Merge pull request #1 from PaulLeCam/master

Structure + started Module and ModuleFactory classes
Merge pull request #1 from MacflyJS/master

Module and ModuleFactory Classes
Added functionality to delete all the sources before repopulate it with ANT
added newfile
Merge pull request #4 from mihgen/newbr

added newfile
Delete four images for map
Fixed refactoring of vprintf/printf usage in examples.
Fixed typo in class description.
Making updates of ports atomic to secure update in interrupt handlers.
Use bundler and rbenv properly.
Added sort order 'decending' to allow ordering of results
Hacky generate HTML graph, should be tested properly!
Added proper test for JSONWriter and for ordering
Added output option to yaml
Added initial case to choose output based on config and tidied up CSVWriter
JSONWriter can now output either a json object or a json array
Added template
Removed view
Protocol does not have a recv attritbue.
This causes dul-receive-pack to throw an error.

Fixes a bug where an AttributeError is thrown when dul-receive-pack is
run. This is caused due to the fact that the default protocol used is
the Protocol class, which does not have recv defined.

Signed-off-by: Jelmer Vernooij <jelmer@samba.org>
Merge branch 'master' into binpatches
Renamed the file to clustCov to reflect that this guy will now do clustering as well as transformation.
Put all the working code into a class to make things a little neater
Adding linnlive api (generated from WSDLs)
Adding placeholder config file
Skeleton class for Linnlive wrapper class
Add proper parens in "NoIn" expressions.

fix #60.
Add sourceRoot option to minify
Merge pull request #19 from SevInf/master

Allow to specify sourceRoot in minify
Association Cluster <-> Admin working
Sharekit readded as submodule
removed twitter+oauth
Merge branches 'removeBranches' and 'master'
Updated registration page style and langs
added feature-mode (cucumber) support
Modified the author and javadoc snippets
Added inherit snippet
Removed unneeded if checks. Store transition class in a const
Fix a compile error with OGDF on GCC 4.7.0.
Updated id to match previous version
Kill ssh-agent on logout
Merge pull request #1 from mkenyon/kill-sshagent

Kill sshagent
refine flush with touched and action
Servicios comprobados y funcionan correctamente desde upv
Normalise values read from the config file

Lowercase & strip leading/trailing dot
Find the best zone from ZONE_SERVER

For example with ZONE_SERVER['example.com']=... we want
to split www.blah.example.com as host=www.blah and zone=example.com
Merge branch 'github'
added setRenderer call, removed transitions, changes to how force is applied - accelerometer not working!
link to session result page is added.
Added delete button on web view data instance
Added delete button on web view data instance
Merge branch '361_add_deletebutton_web_data_view' of github.com:modilabs/formhub into 361_add_deletebutton_web_data_view
remove print traces
added modal box
Test for deletes
Merge branch 'master' of github.com:modilabs/formhub into 361_add_deletebutton_web_data_view
update warning text
syntax fixes
update pymongo to 2.2.1
Merge branch 'master' of github.com:modilabs/formhub into pymongo221
merge in master
Merge pull request #506 from modilabs/pymongo221

update pymongo to 2.2.1
touch
change ui on selecting crowdform for form and data shared buttons
fixed merge override
Test cases for delete
added test to check if owner can delete
Merge branch 'master' into 361_add_deletebutton_web_data_view
Merge pull request #509 from modilabs/crowdforms-js

change ui on selecting crowdform for form and data shared buttons
float conversion in correct place
version bump > pyxform 0.9.4
Merge pull request #280 from modilabs/v0.9.4

version bump > pyxform 0.9.4
Added Results controller
Merge branch 'master' of github.com:mogelbrod/dotnet
Adds create_tournament rake task
Create default settings for new tournament
v12.07.24
update
update
Laad laatste order dmv IncrementId
core: Register all sessions in the same way
qt4: fix size of comboboxs in login page
refine group contacts
Build a DMG when user runs build_osx.sh dorelease
Merge pull request #1470 from linuxqq/master

webqq: remove group contact parser
Merge pull request #1471 from joshf/master

Build a DMG when user runs build_osx.sh dorelease
Merge pull request #1469 from jamesaxl/master

qt4: fix size of comboboxs in login page
qt4: set focus in login page class, prevents exception with autologin enabled
qt4: fallback icon for contacts without a picture in conversation
qt4: raise notimplementederror in contact information dialog
papyon: more debug infos on transports
core: make extensions out of history exporter methods, closes #1423
xmpp: updated SleekXMPP
Themes: Resize group chat icon to fit status ones.

Or in group chat, the Header will resize each time status icon changed.
Fixed 'Bug 6078 - Confusing intellisense for enums'.
[NRefactory] Updated NRefactory.CSharp
More #37 making the ElasticSearchClientFactory methods simpler
Updated xml parser
MDL-32581 support additional format field with all text field in extrnal lib function + new possible ws params to decide how format is returned (which are stored in a singleton)
MDL-32581 should force type of external_format_value structure
gogo 4/10
Bug 797311 - React to correct data passed in from contextmenu events
Merge pull request #5648 from daleharvey/browser-contextmenu

Bug 797311 - React to correct data passed in from contextmenu events
Auto-merge from branch 'master'
Removed outline from links
Updating sms conversation list when a new sms is from that conversation.

fixes #2114
Merge pull request #2112 from borjasalguero/bug_sms_highlight

Removed highlight/outline from "<a>" tags
Merge pull request #2115 from arcturus/sms-fixes

Updating sms conversation list when a new sms is from that conversation.
[settings] l10n update
Merge pull request #5560 from fabi1cazenave/l10n-settings

[settings] l10n update
Auto-merge from branch 'master'
Change the kind of keyboard to 'tel' when isAlphabet is false
Merge pull request #6350 from frsela/Bug808776

Bug 808776 - Select Item on STK option K is not working, r=mvines
Auto-merge from branch 'master'
Update email function with database changes
taking out extra stuff from gitignore, removing the commited version of sqlite db - we keep local copy from dropbox share
adding in bhavanna's test site
Change snippet impressions tracking to use GET.
Kommentare verbessert.
Delete rogue files.
Simplex2: mark inconsistency
Added Proguard dependency
updated actions and markup
fixed path to registered users page in route.db
adding migrations 4,5,6 for dm4 2f32c7d1f8b1a2ee7588015fe6fcfc044832d384 to 4.0.12
partnerlinks
neue tabelle
Add document count support to storage engine.
Fix sequential etag generation.
Add support for deleting a document.
Return document count.
Add support for the /docs url.
Fix cloning a specific revision
edit survey button when user is admin and survey is from ukda
move addon files into dedicated addon subdirectory to make way for other files (like build scripts)
make executable launch work on Mac
add HTML5 boilerplate web page to use as interface
remove analytics, add title
use content script to hook up Run B2G Desktop button in web page to launch of B2G in addon script
remove boilerplate code from page
isolate content in data/content/ subdirectory
point to the new correct location of the content
switch from port.emit to postMessage since we have to use postMessage in the content, and this maintains consistency in the transmission of the messages from the content to the addon
explain what the content script does
make sure messages can be transmitted in the other direction
beginnings of a build script
Implement FileSystem read/write interface.
Start working on using the storage backend rather than the file system.
Add @JonathanTron to contributors list.
Copied example2 from buck folder to forward folder
Change the way the duty cycle is managed in example1

This way it is more intuitive to set the duty cycle in PWM_DUTY_CYCLE
Changed the EPW1_TZINT line order

We are having problems at high frequencies and the time we spend in this
interrupt seems critical
Upper hysteresis band gain changed

Upper hysteresis band gain is now updated based on Vout. A blanking
window has been added when clearing PWM.
std: _exile/myu_class_func_ptr, parallelable delete
file_stream.hpp: VC++ 4996 警告うざいからなー
uri.hpp: uri_any_authority::generate() に const 付け忘れ
fixed date format
Merge branch '1.0' of github.com:nabeta/enju_leaf into 1.0
set curl option [ curl_get_contents() ] & little correction
Merge branch 'd&d_from_browser_window' into 2.x_n
Compture median duration of queries
Merge branch 'master' of https://github.com/naparuba/shinken
Settings are now persisted in an XML file
optimize checking of hooks by avoiding empty? which uses seq in favor of java isEmpty method
refactored getOtherPlayer function name
Customized zsh symlink config
Making progress on query i #18
Add vim bundles surround, showmarks
colorssって何？ｗ
Merge branch 'master' into reuse-gcr-cache-instances

Conflicts:
	ha/src/main/java/org/neo4j/kernel/HighlyAvailableGraphDatabase.java
	ha/src/main/java/org/neo4j/kernel/ha/MasterGraphDatabase.java
	ha/src/main/java/org/neo4j/kernel/ha/SlaveGraphDatabase.java
Merge pull request #26 from tinwelint/reuse-gcr-cache-instances

Uses ability to reuse gcr caches between sessions for between internal...
Added authentication to results
Adjusted RegistrationRequest Async Task in CloudManager to succesfully communicate with the app engine and get a response message depending on validation
pulsesink sync to false
Refactoring of Facebook Javascript done, tests at 50%
Cleaned up a little and eliminated the extra jQuery so that we use just ours
Refactored code and naming convention so that test pass on IE8
Facebook tests almost done