ENH: add a capability to change the default linking behavior on slice node and slice composite node; addresses issues 1772 and 1878. These updates have beendeveloped in consultation with Jim Miller.


git-svn-id: http://svn.slicer.org/Slicer4/trunk@20856 3bd1e089-480b-0410-8dfb-8563597acbee
BUG: adding file accidentally missed in r20856 commit


git-svn-id: http://svn.slicer.org/Slicer4/trunk@20857 3bd1e089-480b-0410-8dfb-8563597acbee
STYLE: use 'not var' instead of 'var == None', per Steve's stylistic recommendation :)


git-svn-id: http://svn.slicer.org/Slicer4/trunk@20858 3bd1e089-480b-0410-8dfb-8563597acbee
BUG 2229. Save data for storable nodes that are present in SceneViews but not in the main scene.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@20859 3bd1e089-480b-0410-8dfb-8563597acbee
BUG: closes issue 1090 and related by adding in some widgets in the hierarchy node annotation properites widget, iterating over annotations in heirarchies to set text and glyph scale, and glyph type

git-svn-id: http://svn.slicer.org/Slicer4/trunk@20860 3bd1e089-480b-0410-8dfb-8563597acbee
ENH: #2432 Custom cursors for editor effects

Still WIP because the background is not being painted correctly, and
the toggle erase effect does not behave right.  Otherwise the basics
are in place.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@20861 3bd1e089-480b-0410-8dfb-8563597acbee
ENH: implementation of feature 2432 custom cursors in Editor

With this, there is an auto-generated cursor for each mouse tool
to remind the user what mode they are in.  This update also
allows tools to turn off the cursor during interaction so it
is easier to see the background.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@20862 3bd1e089-480b-0410-8dfb-8563597acbee
BUG: fix for cursor management between annoation and Editor

Turn off the Interaction Mode before changing cursor so
that custom cursor is not disabled by annotation.
Note that similar change should be made to annotation
code.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@20863 3bd1e089-480b-0410-8dfb-8563597acbee
ENH: provide download feedback in SampleData

Use the report hook in urllib.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@20864 3bd1e089-480b-0410-8dfb-8563597acbee
ENH: improved SampleData progress message

git-svn-id: http://svn.slicer.org/Slicer4/trunk@20865 3bd1e089-480b-0410-8dfb-8563597acbee
ENH: Add 'reload-and-test' infrastructure to scripted module template

This provides a one-click method for developers to modify their
code and their test on the fly.  The sequence should be that developers
can create a module (extension) using the ModuleWizard, point
their module path to it, and then start slicer to load
their new module.  From there they just edit the implementation (GUI
and Logic) and the test to exercise it.  Hitting the reload and test
button brings in the latest copy of their code, replaces the GUI, and
runs the test.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@20866 3bd1e089-480b-0410-8dfb-8563597acbee
BUG: Slicer crashed if the name of the EMS Template node did not match the mrml file name

git-svn-id: http://svn.slicer.org/Slicer4/trunk@20867 3bd1e089-480b-0410-8dfb-8563597acbee
ENH: update CTK to get fix for #1977

This fixes the enable state and selection options in the dicom
browser as described here:

https://github.com/commontk/CTK/commit/46438451e5f1a4c69f7f9aaf5174587fa96bda87

Note: this update also pull in changes to the ctkPathLineEdit

 https://github.com/commontk/CTK/commit/0de5ad082c0ba0d68056ca40a4e31ea2b9bd0556
and
 https://github.com/commontk/CTK/commit/f03fb5dc0217df08e0df566449b97c6f918ccd79

git-svn-id: http://svn.slicer.org/Slicer4/trunk@20868 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: multivolume relies on DICOM, so disable if no DICOM

git-svn-id: http://svn.slicer.org/Slicer4/trunk@20869 3bd1e089-480b-0410-8dfb-8563597acbee
BUG: fix name of logic class in script testing template

git-svn-id: http://svn.slicer.org/Slicer4/trunk@20870 3bd1e089-480b-0410-8dfb-8563597acbee
ENH: updated color file for brain atlas to fix issue 2435, with some updated colors from Marianna and Ron

git-svn-id: http://svn.slicer.org/Slicer4/trunk@20871 3bd1e089-480b-0410-8dfb-8563597acbee
BUG: working on issue 2428, showing how import is failing with respect to model poly data pointers

git-svn-id: http://svn.slicer.org/Slicer4/trunk@20872 3bd1e089-480b-0410-8dfb-8563597acbee
BUG: database attribute did not need to be a QSharedPointer

As a shared pointer things worked until we try to change the
database directory with the directory button.  When doing this,
we get a message like the following and then a crash.
QSharedPointer: pointer 0x2384d70 already has reference counting

Making this a regular pointer seems to work, since the memory is
handled by the python code in the DICOM module.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@20873 3bd1e089-480b-0410-8dfb-8563597acbee
BUG: issue 2163 expand the test to show what's expected

git-svn-id: http://svn.slicer.org/Slicer4/trunk@20874 3bd1e089-480b-0410-8dfb-8563597acbee
ENH: provide feedback and event loop support for self tests

Now the example template includes a simple way for people running
the test to watch what is going on.  Also with the event processing
the test more accurately captures what a user would do.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@20875 3bd1e089-480b-0410-8dfb-8563597acbee