labofsahil/github-event-dataset-2012 huggingface dataset:
Configuration can be persisted via the web ui.

Done through the /ajax/set_config uri. Also made extension matching case
insensitive (.VOB didn't match .vob for instance).
improve header appearance
fix command line option bugs in vc to make it work for qust
delete down
height js
Fix segfault when using bm:site/path bookmarks in get/mirror commands

Test case:
	* Create bookmark: bookmark add free ftp://ftp.free.fr
	* Try to download file using bookmark :
	  lftp -c "get bm:free/mirrors/ftp.ubuntu.com/releases/10.04/ubuntu-10.04.4-alternate-amd64.iso

Result:
	Application Segfaults

Fix:
	Issue was due to a pointer (xstring) being assigned on the stack,
	then assigned to new_url.
	new_url is used later in the code, however since at that point the
	original pointer is no longer in the scope, the referenced value
	contains garbage.

	Patch fixes the issue by moving the initial xtring in the same scope
	than new_url
Mention the bm:site/path syntax in the man page
Merge pull request #20 from ey3ball/bookmark_segfault

Fix segfault when using bm:site/path bookmarks in get/mirror commands
url_for will ask for url_key from object
don't write "nil" when no content is set
add some model files and add the qq request for qun and ..
mss2: do not try to read too many palette entries

Reported by Michael Niedermayer <michaelni@gmx.at>

Signed-off-by: Kostya Shishkov <kostya.shishkov@gmail.com>
mss12: avoid unnecessary division in arith*_get_bit()

That division can be replaced with a comparison:
((c->value - c->low) << 1) + 1 >= range

By expanding 'range' definition and simplifying this inequation we obtain
the final expression.

Suggested by Michael Niedermayer <michaelni@gmx.at>

Signed-off-by: Kostya Shishkov <kostya.shishkov@gmail.com>
mss2: simplify loop in decode_rle()

It calculates the sum of power of two series, which can be done in one step.

Suggested by Michael Niedermayer <michaelni@gmx.at>

Signed-off-by: Kostya Shishkov <kostya.shishkov@gmail.com>
Buena base dentro de la carpeta

Cambios para el cambio realizados
Site updated at 2012-12-17 06:22:20 UTC
This should fix partial badges error on profile page.
Fixes to admin page showing all badges.
Fixes to badge source list.
Fixes error where all new badge names where identified as already existing.
Copyright Bug fixed
Add fix for missing 64 divide on 32 bit ARM
added tripser map
Problem 052. Completed.
Change suffix to .tar when decompressing or listing .tgz.
Simplified the sample steps.
doc string style fix

Change-Id: Ie0d6b82aec9235118a76a058fafbac63f80c9af9
move basepath into parent class

Change-Id: I065cd546d33c6f5972440f7c35cb8c77aa17ab9a
naming conventions and dead code removal

Change-Id: Iba712f82eb8f978b1a0c7912ec5b0be3c07f21a6
swagground image
fixed stylsheet merge conflict
Fix Gtk3 development package name
Remove outdated PHP syntax file to use the newer one that comes with vim 7.3
Substituted new HomePage index.html with dc.js graphics!
implemented ownerSVGElement
Trying to find the received actions tab
trying to find the received actions tab
Improves support for Clang in Google Mock Doctor.

git-svn-id: http://googlemock.googlecode.com/svn/trunk@394 8415998a-534a-0410-bf83-d39667b30386
More Clang support improvements in Google Mock Doctor.

git-svn-id: http://googlemock.googlecode.com/svn/trunk@395 8415998a-534a-0410-bf83-d39667b30386
Renames the license files.

git-svn-id: http://googlemock.googlecode.com/svn/trunk@396 8415998a-534a-0410-bf83-d39667b30386
Implements matchers WhenSorted() and WhenSortedBy(); pulls in gtest r595.


git-svn-id: http://googlemock.googlecode.com/svn/trunk@397 8415998a-534a-0410-bf83-d39667b30386
Modifies gmock_doctor.py to work with GCC output that contains file:line:char positions and left and right quote characters (U+2018 and U+2019) instead of apostrophes (U+0027).

git-svn-id: http://googlemock.googlecode.com/svn/trunk@399 8415998a-534a-0410-bf83-d39667b30386
Fixed Google Mock Doctor Clang regexes to work on both k8 and piii (by Greg Miller).

git-svn-id: http://googlemock.googlecode.com/svn/trunk@401 8415998a-534a-0410-bf83-d39667b30386
Expressed the thread-safety annotations in code, replacing the existing comment-based system (by Aaron Jacobs).

git-svn-id: http://googlemock.googlecode.com/svn/trunk@402 8415998a-534a-0410-bf83-d39667b30386
Fixes a lock reentrancy when destroying a mock causes destruction of another mock (issue 79) (by Aaron Jacobs).

git-svn-id: http://googlemock.googlecode.com/svn/trunk@403 8415998a-534a-0410-bf83-d39667b30386
docs
docs
pred. is just find + up
add fblikebutton, remove sharethis
Rename
Reorganiziation
terminal: Handle selection for pointer positions outside widget correctly

That is, don't crash and select entire first/last line when the pointer
is above or below widget.
clipboard: initialise clipboard memory after creation

In case we don't, weston segfault in clipboard_set_selection
on:
if (clipboard->source)
		clipboard_source_unref(clipboard->source);
terminal: Insert newlines when copying multiple lines
terminal: Extend selection to end of line when selecting past last char
compositor: Correctly calculate changed sub image rectangle

When calling glTexSubImage2D for sub image updates for SHM surfaces the
changed rectangle was being wrongly calculated. This resulted in interesting
redraw artefacts for clients using SHM.
shell: Use desired output when sending configure events when maximised

With shell_surface.set_maximised the caller can provide an output to maximise
to or the default output will be used. With the corresponding configure we
should use the dimensions from the chosen output not the output the surface
was currently on.

Similarly when calculating the position for the window in the map() function
we should use the desired output again.

There is no need to assign shsurf->output to es->output since that happens in
the map() function later.
compositor-x11: Set make and model so we don't send NULL strings
Added very simple UI to run test
bugs fixed:authorization and launch test
.
persistent entities done
gitignore R.java
set bg to scrollview
Include traceback information in exceptions logged
Merge branch 'next' into tabbed_options
Merge pull request #2 from mllm/to_postgresql

Passage à Postgresql et correction des références entre les modèles
fix ripemd160 to use hash_init family and add documentation

this patch removes the exports for ripemd160 from the previous patches
and incorporates those functions into the hash_init family. documentation
is also added.
one more try with submodules
review README

Change-Id: I37041a4cf737fb766ac3fcbb9ad9b2c408f6ff73
No longer need a patched, XeTeX specific ICU
Add a --syslibs option to build with system libs

Dynamically links to system installed libraries instead of statically
linking to ones from build tree. I don’t want to kkep building libraries
every time I do clean build.
add a sandwich request
update future-friendly.css
Started bug fixing the rrtransform and necessary transform class. More is needed.
Update README.md

Format correction
Array#join to accept only strings as sep
remove Syntax OK if syntax isn't ok; close #368
Merge branch 'master' of github.com:mruby/mruby
Fix spelling
Merge pull request #3 from tjsingleton/patch-1

Fix spelling
remove flags from irep
Add MYUtilities podspec
marking messages for translation
bug fix in message send to CBA to thank them for their work

Only count patient traces in reporting month
Merge branch 'zambia/release' into develop
Merge branch 'develop' of https://github.com/mwana/mwana into develop
add required registration for most keywords. update tests.

- also a change to the referral response message
use the referrer's facility in the response. update tests
Adding scheduled task to inform inactive (by activity, not choice) users that they are inactive
Add .hasOwnProperty() check.
remove vendored backbone
add backbone tests via submodule
fix creating nodes with attribute hash
support filtering of orphans
test namespace support
support finding by id outside of dom
swap emptyArr for an array
ensure callbacks fire out of dom

One note is that events will not bubble when not attached to the DOM.
jQuery has its own implementation for ensuring bubbling.
clean up copies of libs
Merge pull request #40 from mythz/backbone

Backbone Compatibility
add maali.leh
rename fish-shell to fish
Upgraded database
changed css to use less
added subscribe to private table connection queue
how to get the valid segments from the cmd-line
슬라이드 구현중
탭3번 백버튼 추가
modified ajax
Merge branch 'master' of github.com:nedfex/Test
Added smarty templates
Added user add controllers etc.
Added user add controllers etc.
tests: fixed for PHP 5.3.17
Throw IllegalStateException if DynamicChannelBuffer exceed the maximum
ChannelBuffer size of 2gb. See #258
added croni skeleton to python tools
add logoSaberr.png
Adding more complex equation parsing for time test, and ability to run groups of tests from the command line
some optimisations
Being consistent in Event.
Code Cleanup
Prepared domain classes for  new update method.
complete Test
oh hello			AHHHHH
Don't care about squiggly-suffixed changes to NOO anymore, you guys.
handle mp3 with bad header frames
Initial work for transitions between states. Adds the ScreenTexture object, which creates a frame buffer and binds rendering operations to it so that drawing can be captured in a texture.

The first experimental transition is a simple fade to black. This isn't too different visually than what we already have, except that the previous version was just blitting over whatever was on the screen enough times to make the whole thing black. This version doesn't block the UI thread during the fade, and it's more precise.

There is still some work to be done around making the Execution Stack handle transitions more cleanly, because currently it doesn't support a game state pushing a state and then finishing in the same frame (causes the newly pushed state to get deleted instead of the transition state). As well, there is a really weird bit in the FadeState.cpp draw method that pinches in the screen capture by 0.5f on each edge. For some reason, the render looks weird without this, but I would like to find out why this is happening before merging this into the main dev branch.
[transitions] Fixes and additions

1. Moved ScreenTexture FBO creation to constructor to match destructor
2. Fixed FadeState UV mapping (0.0->1.0)
3. Added SpinState transition
4. Added RandomTransition
5. Remapped SDLK_TAB to RandomTransition::create
[transitions] whitespace/comments cleanup
Merge pull request #20 from secretrobotron/transitions

Pulling in fixes for transitions, as well as a new SpinState transition and a RandomTransition factory.
Some documentation touch-ups, plus proper attribution for the new states.
Improvements to transition framework

Making ExecutionStack aware of transition states so that it can clean
up a transition state before the next state is activated. Prior to this
change, transition states had to remain on the stack and execute a
completion frame when the state above it in the stack was completed.

Aside from this, some small cleanup, and removal of newState parameter
in SpinState and FadeState, since these two states only act on the old
state.
Adding Blend transition

Added a transition that blends from one transition to another without
an intermediate fade-to-black.
Renaming RandomTransition to RandomTransitionGenerator

A very small clarifying change since I'll be adding a "Transition" type
shortly and RandomTransition is actually a Transition factory.
Pulling common transition code up to TransitionState superclass

Created a TransitionState class that will calculate progress through a
transition and defer drawing to subclass transitions. This superclass
will also be responsible for initializing the ScreenTextures needed by
each transition.

Made BlendState, SpinState and FadeState into subclasses of
TransitionState. None of them have a step function anymore, and their
constructors are empty, because all that functionality was the same
across the three of them and thus was pulled up to TransitionState
instead.
Fix translation dumper
we has only just begun
added 5s
Finish lifting the requirement to have an actual python function with a code object
Rename math package to math_tests
Email Inbox function added in the msg controller.Also added in the menu.
Population Report & prepop
Merge branch 'master' of git://github.com/ashwyn/eden
Merge branch 'master' of git://github.com/flavour/eden
fix bugs in ADAT - map & chart relating to grid child questions
fix bugs & enhancement to Inventory - send, add supply org to search and report
remove colour from spreadsheet as the default
improve pdf rHeaders
Expand on test functions dataTables and autocomplete
Merge branch 'master' of git://github.com/flavour/eden
Bugfix Population Report
Merge branch 'master' of git://github.com/flavour/eden
Merge branch 'master' of git://github.com/flavour/ifrc
NXBT-436 upgrade NDT to 1.11.4
Misc bugs.
Fixes bug where stream and engineer used wrong id.

  These two views were using the wrong id when constructing ticket URLs.
fixes for issues of app no longer having address()
Added version of LRT /w FC with branching factor 4

Updated the benchmark.py file too so that we can test casading4.
Merge branch 'kdtree' of github.com:omoll/redis into kdtree

Conflicts:
	src/t_sortedarray.c
Forgot to add new file
Rating system paragraph is added
- fix support for offset in read (HW04)
- fix read operation (HW06)
Fix connection/set-namespace (called for side effects, but without an atom the namespace was being forgotten and namespace could not be changed)
send back well formed events to slime
Server & DB config
Convert all filenames to lowercase
Use ENV for DB; fix character ci bug
cost_min
fix test title
fix test title
add test name in comment
Improvements to unchecked warnings.

Closes SI-6275, SI-5762.

The comment says is better than I can.

/** On pattern matcher checkability:
 *
 *  Consider a pattern match of this form: (x: X) match { case _: P => }
 *
 *  There are four possibilities to consider:
 *     [P1] X will always conform to P
 *     [P2] x will never conform to P
 *     [P3] X <: P if some runtime test is true
 *     [P4] X cannot be checked against P
 *
 *  The first two cases correspond to those when there is enough static
 *  information to say X <: P or that !(X <: P) for all X and P.
 *  The fourth case includes unknown abstract types or structural
 *  refinements appearing within a pattern.
 *
 *  The third case is the interesting one.  We designate another type, XR,
 *  which is essentially the intersection of X and |P|, where |P| is
 *  the erasure of P.  If XR <: P, then no warning is emitted.
 *
 *  Examples of how this info is put to use:
 *  sealed trait A[T] ; class B[T] extends A[T]
 *    def f(x: B[Int]) = x match { case _: A[Int] if true => }
 *    def g(x: A[Int]) = x match { case _: B[Int] => }
 *
 *  `f` requires no warning because X=B[Int], P=A[Int], and B[Int] <:< A[Int].
 *  `g` requires no warning because X=A[Int], P=B[Int], XR=B[Int], and B[Int] <:< B[Int].
 *      XR=B[Int] because a value of type A[Int] which is tested to be a B can
 *      only be a B[Int], due to the definition of B (B[T] extends A[T].)
 *
 *  This is something like asSeenFrom, only rather than asking what a type looks
 *  like from the point of view of one of its base classes, we ask what it looks
 *  like from the point of view of one of its subclasses.
 */
Merge pull request #1456 from paulp/has-symbol-field

Renamed hasSymbol to hasSymbolField.
Fix for rangepos crasher.

wrapClassTagUnapply was generating an unpositioned tree
which would crash under -Yrangepos.  See SI-6338.
Eliminated pattern matcher warning.

Implicit extractor must be available to pattern match on
abstract type.  Requires prior commit not to crash under
-Yrangepos.
Fix for spurious warning.

Eliminates spurious "catch block may intercept non-local return"
seen in recent builds of master.  Unified some catch logic
in TreeInfo, and removed some which never worked.
update directory structure

Per Greg and Constance recommendation we rearrange the directory
structure into a search engine directory organization
Remove santon file
added ability to provide custom name to the pd-gui instance (for combining all windows under the same icon on recent WMs (like Ubuntu's Unity), made all toplevel windows inside pd.tk inherit the class name of the root window, added new ways to select and edit text inside an object (ctrl+left and ctrl+right take you to the next argument, ctrl+shift+left/right select the same space, shift+left/right alter selection, home/end or down/up take you to the end/beginning of the text entry).
Style tweaks for CAPTION 2010
fixing JobStatus target problem
niecza fudging
add basic method delegation tests
unfudge a splice test for rakudo
enh: better naming
bug: record error problem, removed
changes for test run
bug: trying to fix zero prob error in lognormal model, still broke
bug: graphing, not fixed
bug: graphing fixed
latex code compiles
enh: latex compiles in python
pv ready to run
pv test suite expanded
Fix position for nodes without adjacencies:
New nodes positions after graph.refresh() called all nodes with no adjacencies was placed outside the visible area or on the corner and it was difficult to work with this items.
This change makes visible area smaller and all the nodes becomes visible.
Also yuicompressor version updated to 2.4.7 from 2.4.2 and make.py cleaned for pep8.
Fix issue from previous step.
Small performance improvement.
Merge pull request #109 from GrAndSE/master

Force directed graph nodes without adjacencies
Fixed Bug #62202 (ReflectionParameter::getDefaultValue() memory leaks with constant)
fixed #62433 test for win
Merge branch 'PHP-5.4'

* PHP-5.4:
  fixed #62433 test for win
Add test for #62907
Merge branch 'PHP-5.4'
Fix for bug#61411

Bug #61411 PDO Segfaults with PERSISTENT == TRUE && EMULATE_PREPARES == FALSE
Wrong allocation, that doesn't follow the scheme of using stmt->persistent
was the root cause of the problem and the crash at free.
fix to infinite loop
scan1
dodanie drugiego testu
Fix upgrade, while here completly forbid downgrade when installing/upgrading
Add missing locale keys for category and series grids
Sort copyright holder and put them in chronological order

As suggested by Christoph
Handling save button state.
adjusted typography.
consistifying the file browsing UI.
Merge branch 'gh-pages' of https://github.com/poole/poole into gh-pages
Adding HTML5 autofocus to search bar, CSS improvement

Adding HTML5 autofocus to search bar + tiny CSS improvement
Fix jekyll compilation, broken in bb3d12a84989e4cc55b72c91db1338267ffb8fc7
Merge pull request #243 from cucumber/fix-jekyll-compilation

Fix jekyll compilation
better branching for faster returning from function, unsure formatting tho
[FIX CI]removed double click
[FIX CI] this is already covered by the three following tests
Merge branch 'Rails3.1' of github.com:psy-q/leihs into Rails3.1
[Wip] Inventory List
Added multiple phone types and a sentence class.
修改代码文件结构
added locateAndSetView method
ObjectFetcher.filter(): parameters ending in __isnot were always treated as an OR condition.

* Closes #15
pynag execute with hostgroup defined services

* Quotes now optional when there is a space in service_description
* pynag execute now works for services that define hostgroup_name instead of host_name
* Model.Host.get_effective_service() seemed to be missing the services required for this
* Closes #17
añadida la estructura

header, content y footer
update layout and views
update ignores
fic billou du soir
Remove extra line in Gemfile under turbolinks.
Merge pull request #8006 from GRoguelon/master

Remove extra line in Gemfile generated
catch nil.to_sym errors in partial_renderer, and raise ArgumentError instead
converting some tests to assert_raises, and DRY'ing retrieve_variable changes

Conflicts:

	actionpack/test/template/render_test.rb
Merge pull request #5866 from tiegz/minor_fixes_3-2-stable

Catch nil.to_sym errors in partial_renderer, and raise ArgumentError instead
Use 1.8 hash style :bomb:
Add docs to CollectionAssociation#replace
update AS docs
fix CollectionAssociation#replace docs
Add oscardelben to authors
[engines] initializer method call needs an argument for initializer name
add docs to CollectionAssociation#many?
add CollectionAssociation hierarchy
add more explanation to CollectionAssociation docs
add example to CollectionAssociation#destroy_all
fix CollectionAssociation docs
add examples to CollectionAssociation#concat
add docs to CollectionAssociation#any?
add docs to CollectionAssociation#empty?
remove incorrect example of CollectionAssociation#empty?
The middleware stack is compliant with Enumarable and bits of Array

Try to clarify the docs so that it's more clear how the stack behaves.
Fix typo.
Revert "Add oscardelben to authors"

This reverts commit 33284014c65f7cb0c342caeeda32baf10db71cfc.

Reason: this change doesn't belong to DocRails.
add explanation of raising errors when a limit scope is supplied in Relation#delete_all
move docs from CollectionAssociation to CollectionProxy
Added wrapper tag documentation to the simple_format method
guides location has changed [ci skip]
add an RDKit implementation of the Plane of Best Fit algorithm

git-svn-id: svn://svn.code.sf.net/p/rdkit/code/trunk@2266 a5045d30-4826-4484-9c7f-6e55a06ddc77
fix and test issue 264

git-svn-id: svn://svn.code.sf.net/p/rdkit/code/trunk@2267 a5045d30-4826-4484-9c7f-6e55a06ddc77
fix and test issue 266

git-svn-id: svn://svn.code.sf.net/p/rdkit/code/trunk@2268 a5045d30-4826-4484-9c7f-6e55a06ddc77
update tests to match expectations for v1.0 of the avalon tools

git-svn-id: svn://svn.code.sf.net/p/rdkit/code/trunk@2269 a5045d30-4826-4484-9c7f-6e55a06ddc77
update tests to match expectations for v1.0 of the avalon tools

git-svn-id: svn://svn.code.sf.net/p/rdkit/code/trunk@2270 a5045d30-4826-4484-9c7f-6e55a06ddc77
move the svg drawing code into GraphMol too

git-svn-id: svn://svn.code.sf.net/p/rdkit/code/trunk@2301 a5045d30-4826-4484-9c7f-6e55a06ddc77
layout: prevent recreation of multipath slaves.

They are partitioned by the multipathing code.
try to exit the DS files
try to delete DS store
pas de pagination pour new_user et new_member
ajout des envois OSC a la sélection layer
do not cache sent data, no resend
Length check does not rely on secondKey being present
Do not rewrite real filenames or directories, even if they look like they could be short URLs.
Lighten text on disabled input elements
Implement client-side encryption of URLs via JS on the front page, fall back to server-side processing if JS is not available
Refactor callbacks to use raw POST body
hacking of PIL
rafactor preready: need some redirects and yandex support
Events migration, fix User#admin? method, fix some Events-related CanCan auth issues.
Make event creation a little easier, do some more CanCan auth checking.
http://drupal.org/node/174617#comment-910713
Beginnings of models, game logic, and repl UI
БО: меняем юзера после создания объявки
Removes getting message definitions from server.

Removing getMessageTypes and getServiceType as required function calls not only
simplifies usage, but also allows for the clean up of the ros.js implementation.
Replaces handlers object with event emitters.

By using an event emitter library for this, more fine grained control of
callbacks is supported. For example, only firing a callback once.
Adds a How To guide to the README.
Adds comments/documentation to the ros.js file.
Simplifies and adds documentation to the example.
Merge pull request #8 from baalexander/removing_message_types

Simplifying API and adding lots of documentation
Optimized code and removed unused lines.
transition to real model view programming
mejoras 13-08 5pm
Merge pull request #26 from JuanMiguel/master

Mejoras al 13-08 5pm
Added license file. Fixed reference from New BSD to Simplified BSD.
Added travis file. Updated README.md with travis image.
Merge branch 'master' of github.com:rsdoiel/opt into web
Made some more UserService tests.
Comment testing for VenueResourceIT. Writing tests is fun
updated the changelog [ci skip]
preparing v1.1.1
fix desk
Added a little bit more documentation for the Scene load()- and unload()-method since it wasn't clearly declared when those methods are called.
Added Zd08, Zd09, Zd10 tasks; zd08 solution
Disambiguate benchmark names.


git-svn-id: https://svn.salilab.org/imp/trunk@15211 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
Don't truncate time resolution to seconds.


git-svn-id: https://svn.salilab.org/imp/trunk@15212 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
Disambiguate benchmark names.


git-svn-id: https://svn.salilab.org/imp/trunk@15213 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
Match boost version with configure check.


git-svn-id: https://svn.salilab.org/imp/trunk@15214 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
add some comments

git-svn-id: https://svn.salilab.org/imp/trunk@15215 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
expose methods to get indexes from particles

git-svn-id: https://svn.salilab.org/imp/trunk@15217 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
Update benchmark to use indexes for evaluation.

git-svn-id: https://svn.salilab.org/imp/trunk@15218 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
restore squashed commit to add IMP_ALWAYS_CHECK

git-svn-id: https://svn.salilab.org/imp/trunk@15219 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
suppress unknown pragma warnings

git-svn-id: https://svn.salilab.org/imp/trunk@15220 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
suppress unknown pragmas for clang also

git-svn-id: https://svn.salilab.org/imp/trunk@15221 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
make the score state test more interesting and actually test that the score states are updated

git-svn-id: https://svn.salilab.org/imp/trunk@15222 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
use the saved last score rather than require restraint statistics be gathered

git-svn-id: https://svn.salilab.org/imp/trunk@15223 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
update the statistics optimizer state to use the periodic optimizer state base

git-svn-id: https://svn.salilab.org/imp/trunk@15224 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
use get_indexes function in ligand scoring

git-svn-id: https://svn.salilab.org/imp/trunk@15225 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
make sure to check for benchmark module externally

git-svn-id: https://svn.salilab.org/imp/trunk@15227 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
handle lack of libs

git-svn-id: https://svn.salilab.org/imp/trunk@15228 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
don't check for IMP.benchmark if there are no benchmarks, this avoids having it be disabled before it has been sourced

git-svn-id: https://svn.salilab.org/imp/trunk@15231 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
Add base::Object::reset_caches()

The method provides a single place to unify the various things that need to clean up caches on Objects. The IMO_LIST() macros use it and various classes have een shifted over to use it instead of their custom reset function. However, I'm sure some are still missed.

git-svn-id: https://svn.salilab.org/imp/trunk@15232 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
suppress unused warnings

git-svn-id: https://svn.salilab.org/imp/trunk@15233 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
disable stuff if python=no is passed

git-svn-id: https://svn.salilab.org/imp/trunk@15234 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
add more tests

git-svn-id: https://svn.salilab.org/imp/trunk@15522 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
Clarify documenation of ReferenceFrame3D + minor update to VectorD::get_unit_vector()

git-svn-id: https://svn.salilab.org/imp/trunk@15524 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
Fix spelling, again.


git-svn-id: https://svn.salilab.org/imp/trunk@15525 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
Since trying to cover globally does not scale, group together only modules that
test each other.


git-svn-id: https://svn.salilab.org/imp/trunk@15526 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
Add a brief description of code coverage.


git-svn-id: https://svn.salilab.org/imp/trunk@15527 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
Don't give lcov empty .info files.


git-svn-id: https://svn.salilab.org/imp/trunk@15529 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
add a program to compute chi score between two profiles

git-svn-id: https://svn.salilab.org/imp/trunk@15531 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
fixes to random number generator in VectorD::get_unit_vector() for the case of tiny vectors

git-svn-id: https://svn.salilab.org/imp/trunk@15532 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
nightly update
nightly branch update
Fix issue in 'opam remove'
Subcommands are now optional ...

When they are not provided, use a sensible default (e.g. 'list').
Horrible hack to have 'opam config -env' working again.
Fix backward compatibility with rsync pinned packages
Add the global variables to 'opam config list'
Merge branch 'cmdliner' of github.com:OCamlPro/opam into cmdliner
Fix typo in 'opam config var' help
Display the implicit variables with 'opam config list'
Add the ability to filter the list of variables.

$ opam list conf-ocaml lwt

('conf-ocaml' or 'globals' for global variables)
Fix jenkinks script
Init java part
answer for problem 23 in perl
Fix 4812

Remove default arguments from parameter ValDefs in UnCurry.
Merge pull request #581 from lrytz/t4812-unc

Fix SI-4812: handle trait method with Symbol as default for argument
Disabling failing tests.

I turn them over to the responsible parties.  Iulian knows about
the deadlock test; for philipp I presume,

07:10:29    [partest] concurrent-future.scala:97: error: not found: type FutureTimeoutException
07:10:29    [partest]       throw new FutureTimeoutException(null)
07:10:29    [partest]                 ^
07:10:29    [partest] one error found
optimized View.js and Matrix.js a little
cleaning up submodules
Remove bufpol package.
Remove event.scm. Residual bufpol clean up.
Remove nt2.c.
Remove ndbm.scm.
Remove proc2.c
Remove config droppings in c/.
Remove constance.
Remove fdports c files.
Remove process_args.c
Remove libscsh.
Remove configure.scm.in
ramanujam:
Add jsperf test for parsing dependencies
Kernel#capture replaced by version which can catch output from subprocesses
Store FlashHashes in the session as plain hashes rather than custom objects with unstable class names and instance variables.

Refactor FlashHash to take values for its ivars in the constructor, to pretty up FlashHash.from_session_value.

Remove stale comment on FlashHash: it is no longer Marshaled in the session so we can change its implementation.

Remove blank lines I introduced in controller/test_case.rb.

Unit tests for FlashHash#to_session_value.

Put in a compatibility layer to accept FlashHash serializations from Rails 3.0+.

Test that Rails 3.2 session flashes are correctly converted to the new format.

Remove code path for processing Rails 3.0 FlashHashes since they can no longer deserialize.
Set hash value instead of using merge!
Raise ArgumentError when no attribute is given to AMo::EachValidator

ArgumentError is better suited than RuntimeError for this.
Fix typo in test name
test case to lock down the behavior of #7842
routing prefix slash replacement is no longer necessary
:counter_cache option for  to support custom named counter caches. Closes #7993
Refactor Inflector#ordinal to avoid converting the number twice
Remove some line breaks between array items that make the assert file tests harder to read
Add ensure block to make sure the state is properly restored
Use flat_map when building AR order
Restore index link states to the way they are in current guide

Current stable guides show the "Guides Index" links without underline,
just showing it when it's hovered. This restores the same functionality
for edge guides.

Also remove annoying pointer cursor while accessing guides index,
restoring previously functionality: now the pointer cursor only appears
when hovering a link.

Closes #8107 [ci skip]
Minor css style improvements

Fix some indenting for some properties and closing }, remove tabs, and
merge two pre/code definitions.

[ci skip]
Remove AS::Concern extension from Testing::TaggedLogging
use Array() instead flatten

* move ActiveModel::Errors tests to errors_test.rb
* add spec coverage for add_on_empty and add_on_blank
Merge pull request #8118 from nashby/activemodel-errors

use Array() instead of flatten
Make the tests pass with minitest 4.2
mocha_standalone is now deprecated. Switch to mocha/api.
Update mocha github repo to new one
making slideshow
Simplify the example even more
use tiqav gem v0.0.5
Update src/java/org/apache/nutch/fetcher/Fetcher.java

reduce thread count
Rename vim-tips.rst to vim.rst
PDF (from TeX) don't depend on {top,bottom}.rst

Also, fix wrong variable name in comment.
Add support to PIC figures be converted to PNG

PIC files (the language to draw diagrams:
http://en.wikipedia.org/wiki/Pic_language) is now supported.
web.site.mk uses pic2plot program to convert pic files to png files.

Also, add download and build of pic2plot in utils/bootstrap.sh.
Add kdeplasma-addons-applets-pingz-git
Support negative uids in bills
got the ajax deletion of images working not thoroughly tested as of yet tho
trying to speed this dynamic page up by taking the dropdowns and downloads out of the view and in includes so they are only included if they need to be rather to stop the templater from processing them if it does not need to
i went back on putting the dropdowns and downloads in includes as it didnt pick up the tags as its not asynchronous the templater
fixed the deletion upon first uploading the image just need to fix it where it still thinks there is an image in there
looks like i fixed the issue with deleting it once saved had to do something within the upload file too but it looks to work now
deletion complete
to speed up the dynamic page i have broken the views down into three and just used a conditional statement to load the relevent view rather than having stupid foreach tags within one view
created an overall listing page which holds a list of all editable pages that link off to their individual sections
set the router to defsault to home controller if empty
started to work on integrating swf upload into the fall back uploader only the start of it at the moment
the widgets are now showing as checked if they are saved although i still have to save the widgets too on the dynamic pages
added if your on a browser that does not support the uploader revert back to uploadify just need to mimick the way it saves to that of the uploader
Merge branch 'master' of github.com:banksy89/CMS
uploader now falls back to uploadify in othe browsers
sorted the delete image, also uploader working and tested in IE8
incorperated Marks cropping script just need to do the server side to save the cropped image
added a crop link to the upload
threw in a back button and also the cropper controller is now up
Merge branch 'master' of https://github.com/banksy89/CMS into dev
(tiny) bit of server side validation
higher moment statistics functions; refactoring of the math fitness search abstractions; search the in-sample target values for long & short levels
Change: Added more descriptive comments.
Merge pull request #86 from span/hotfixes

Change: Added more descriptive comments.
template rendering and publication
Refactor out methods to product class that control if a product is on sale or on display.

Fixes #2167
Refactor variant_images to return a scope, not an Array

Conflicts:

	core/app/models/spree/product.rb
Alias images to variant_images

Calling images on a product will now return all the images for that product. If you only want the master's images, please call product.master.images.

Fixes #1360
Adds a `serializable_hash` method to the result of `Product#variant_images`.

Fixes #1570
Updated plow python __init__.py to import additional ttypes into plow namespace.
Added second argument to killRunningTask.
Updated server to latest thrift specification.
Make sure connector process is called after changing endpoint state
Enhance the example tests
Refactor listeners and connectors
Update for prototype changes
Updated names
Update examples
skip package-info.java when processing
Don't allow inviting people to chat channels if they are banned from that channel.

Also fix response codes CHAT_PLAYER_NOT_BANNED_NOTICE + CHAT_PLAYER_INVITE_BANNED_NOTICE for SMSG_CHANNEL_NOTIFY.

Signed-off-by: stfx <stfx@hotmail.de>
giving some love to the home page
Merge branch 'master' of github.com:stml/offbot
Improved parameter handler
Whitespace cleanup; no functional changes.
Save sort type and sort order for search views (e.g. Unified Inbox)
Use account sort settings when filtering messages of only one account

This will use the account settings when viewing e.g. only the unread
messages in a folder.
Added the global sort settings to the import/export table
Merge onToggleSortAscending() with changeSort() to avoid code duplication
Don't use reflection to load the API-specific Contacts implementation
Always use the application context when instantiating singletons
Added missing account setting "alwaysBcc" to import/export table
Updated Chinese translation (provided by sunnavy)
Updated tests to reflect changes in HtmlConverter.htmlifyMessageHeader()
Fixed issue with TimeZone.setDefault()
Merge branch 'master' of git://github.com/k9mail/k-9
19장 풀이 완료
Change line ending
Uninstall not use package
Update browse page
Add config
Remove not using file
Adds config files from Janus and old vimrc, plus colors
Breaks out Plugin config files and makes some
additions to the old config files
Removes Arpeggio and Command-T plugins due to command line incompatibility
Changed trailing dot character
Moves gvimrc to home directory
Adds FuzzyFinder plugin and mapping
Adds multiple versions of Twilight theme and settles on one
Adds Ctrl-J escape sequence
Adds leader zz to save and quit
-a

Breaks out config into multiple files, removes arpeggio
and command-t .get and .vim files
Actually removes arpeggio and command-t .get and .vim files and oldvimrc
Removing old FuzzyFinder config file
Adds CTRL-P plugin and config file
Changes trailing whitespace character to underscore
Adds Jinja and HTMLJinja syntax and filetypes
Changes colorscheme, syntax setting and color depth
Adds colorschemes
Fixes CleanHexes CSS function
Removes clipboard setting in favor of using * register
Moves bundle-specific configs to after/ directory
reuse stop command for kill; don't make another one
Version 19.1.0 (2012-12-12)
move drawing routines to world objects
Add hero handle, move only when dragging the handle.
Separate new game starting from world creation
restrict within boundaries
sort chromosomes in output
typo fix
initial
Merge branch 'master' of github.com:tarnoga/1cp
Fix
Sutra first
sCache provides site-unique keys invisibly
Update top DocBlock with version change and year
Copied .htaccess from myapp to p2.techneblog.com

Fixes controller redirect
little improvements to code aesthetics
Updated buggy demo
Merge branch 'master' of github.com:technik/rev
Merge branch 'develop' of github.com:saltstack/salt into develop
Add the `module.state.template_str()` failing test.
Added state and test for stopping services #2026
Clean up master config template a little

I got rid of the cluster stuff, since it does not work and needs
to be pulled out of the core anyway
Point links to Github blobs to 'develop' instead of releases
Missed the hidden 'v' in last commit
add smf module to support virtual service module on solaris 10+
Merge pull request #2083 from romeotheriault/add-solaris-service-smf-module

add smf module to support virtual service module on solaris 10+
extention modules is internal, my bad
corrected error in error message for json renderers (jinja and wempy only)
Some minor changes to the minion conf template
Merge pull request #2084 from gcw/develop

corrected error in error message for json renderers (jinja and wempy onl...
Address `pip.installed` regarding weird packages setup. Fixes #2028.

Some packages, carbon and graphite-web for example, install their packages to a specific root, using a `virtualenv` or not. `pip freeze` won't show those packages as installed.
Events documentation fix - iter_event*s*

It's 'iter_events', not 'iter_event'
Fixing operand mismatch between dict and string in file.recurse for return comment when a File is cleaned from a directory on recurse
Merge pull request #2085 from s0undt3ch/issues/2028

Address `pip.installed` regarding weird packages setup. Fixes #2028.
Merge pull request #2086 from cul/develop

Events documentation fix - iter_event*s*
Merge pull request #2088 from DarkSinclair/develop

Fixing operand mismatch between dict and string in file.recurse ...
update salt-key man page
Merge branch 'develop' of github.com:saltstack/salt into develop
TEIID-2217 adding an infinispan datasource example
read and write support for fxvectors and flvectors
Experimental HashMap fun

Makes parsing about 5% faster

--HG--
branch : hashmap
Merge from default

--HG--
branch : hashmap
Added a benchmarking README

--HG--
branch : hashmap
Merge from the normal Data.Map branch

--HG--
branch : hashmap
Add Missing Value for non-present values.

If a Maybe a value should only be optionally included in an Object (as
opposed to being set as "null"), then use .=? to construct its Pair.
This sets the Value to Missing, which causes it to be subsequently
excluded from the Object.
Add ./ operator for traversing Object heirarchies.

./ allows an Object heirarchy to be traversed without parsing anything.
If any of the path components is missing or the wrong type, it returns
Missing.
Tweak documentation.
Add IsString instance for Value to allow direct use of string literals.
Use toAscList for Sets to guarantee stable ordering

Plain Data.Set.toList doesn't seem to guarantee a order, and it would be
unfortunate to get different serializations of a Set depending on how
it was constructed.
Merge remote-tracking branch 'upstream/master'
In Data.Aeson.Parser, export jstring
Fix generic case for maps.
Small cleanups to the generic code
Add support for HashMap from the unordered-containers package.
Merge
Speed up the encoding of numbers.
Support ByteString-keyed Maps.
Merge
Simplify and extend map support.
Improve generic support for maps.
Fix for API requests for Model Template Details
Invalid message for missing require metadata on Model Add API request
Should not be using validate_args on a Hash
Removed help override for newer slice style. Wasn't used anyways
Brand new Active Model Slice

Will make managing Active Model much easier.

Logview summary now is it's own command

Active Model Slice:
Used to view active models, active model logs, and remove active models.
Policy commands:
	razor active_model                                     View all active models
	razor active_model (active model uuid) [options...]    View specific active model
	razor active_model logview                             Prints an aggregate active model log view
	razor active_model remove (active model uuid)|all      Remove an existing active model(s)
	razor policy help                                      Display this screen
Removed active model

Fixed missing base help

Misc bugs with add & update help
Wrong word in help text
Added code to detect if the persistence database is not accessible using the existing configuration (during startup) and output an error message to the console before exiting
Merge pull request #98 from lynxbat/master

Misc updates
Merge pull request #102 from tjmcs/tb/razor_daemon_fixes

Fixes #94
Merge branch 'master' of github.com:puppetlabs/Razor
javascript for searching
search complete
adding FCGI-0.73
adding Module-Versions-Report-1.06
adding tk-8.5.10
- Improved the Makefiles
- Started implementing the tty driver.
Release 1.2.4 isOopsmethod removed from object prototype Added getType() to oops toplevel. Tested by 300 test cases. ChainManger renamed to VTable. Fix for simple oops instantiation
commented push
update installed scripts with the configured perl

Also fixed deps to allow tests to run, and adjusted some
test scripts to skip if their deps aren't available.
Sync to commit f55783f: Cosmetics; Minor changes to help writing patches against OCCT.

New patches:
 patches/add-missing-include-stdio.h.patch
 patches/bugfix-check-handles.patch
 patches/bugfix-opengl-regression-fix.patch
 patches/bugfix-points-swapped-in-BRepExtrema_DistanceSS.patch
 patches/bugfix-unused-value.patch
 patches/bugfix-wrong-test-due-to-missing-parens.patch
 patches/cppcheck/fix-unused-local-var.patch
 patches/drop-getGL2PSFontName.patch
 patches/fix-build-failure-error-format.patch
 patches/ports/borland14.patch
 patches/ports/do-not-undef-GL_VERSION.patch
 patches/ports/fix-build-on-Alpha.patch
 patches/ports/rename-glext.h.patch
 patches/warning/add-delete-operator.patch
 patches/warning/fix-constant-logical-operand.patch
 patches/warning/fix-dangling-else.patch
 patches/warning/fix-defined-but-not-used.patch
 patches/warning/fix-dynamic-class-memaccess.patch
 patches/warning/fix-implicit-bool-conversion.patch
 patches/warning/fix-implicit-conversion-from-wider-type.patch
 patches/warning/fix-old-declarators.patch
 patches/warning/fix-parentheses-equality.patch
 patches/warning/fix-signed-unsigned-mismatch.patch
 patches/warning/fix-tautological-compare.patch
 patches/warning/fix-uninitialized-var.patch
 patches/warning/fix-unused-local-function.patch
 patches/warning/fix-unused-local-var.patch
 patches/warning/remove-duplicate-checks.patch

Dropped patch:
 patches/cppcheck/fix-uninitialized-var.patch

Refresh patches:
 patches/cmake/bump-version-number.patch
 patches/cmake/ctest/more-tests.patch
 patches/cmake/precompiled-headers/add-the-effective-precompiled-headers.patch
 patches/cmake/remove-pragmas.patch
 patches/cmake/unsorted.patch
 patches/config/add-OCE-prefix-to-macros.patch
 patches/fix-symbol-decorators-Draw.patch
 patches/ports/borland11.patch
 patches/ports/windows-non-MSVC.patch
 patches/review/add-todos.patch
 patches/series
 patches/warning/fix-Standard_IMPORT-usage.patch
 patches/warning/fix-comment-format.patch
 patches/warning/fix-comparison-between-different-enums.patch
 patches/warning/fix-unreachable-code.patch
 patches/warning/modify-MSVC-pragmas.patch
tests are now run with npm test
[deps] add colors for tests
add success message when all tests pass
perviy git on trudniy samiy
readme update
Merge branch 'master' of github.com:u1teq/test1
NEW: test refreshCachewithThread
* UI2: add LICENSES file (anyway there is no check on it)
* fixed texts for advanced hovernets and bloodspiders
* made the rounds for smoke and incendiary firedefs scriptable
added offload sendfile to OSX
version: 0.7.4.

11-11-12.
- Added GUIfor ProfileViewController.
- Added custom UI-cells for Settings table.
- Added NSTimer object for part class GDFBAppViewController for
managing FBRequest states. Using GDDATA_CONNECTION_TIMEOUT define for
time-out time.

09-11-12.
- Added designed discloser gift image.
- Added GDSwitch class and replaced standard switches with it.

08-11-12.
- Disabling application running in background.
Added IcoMoon
Added HTML5 Doctor
Editing posts enabled

Also reverted blackboard changes and
did some fixes to test-datasouce attachments handling
Disable throw on thread termination if held locks are detected. This is a workaround for a problem as outlined in the committed file.
Minor optimization: we do not need to reschedule the free() operation on a HPX thread if the shared_mutex is safe for non-HPX-threads.
Fixing AGAS performance counters
Performance Counter name consolidation (once again)
More work on Performance Counter docs. Not finished yet.
Fix compilation problem
CMake: Enable support for manually overriding GCC version test to support crosscompilation (#459).
Fixing startup/shutdown functions to be called only once
Enabling Performance Counters exposed by dataflow component, adding destructed counter
Performance Counter docs WIP
Examples (spell_check): Fix MSVC folder name.
Adding performance counter for length of outgoing parcel queue
CMake: Improve external CMake support
Merge branch 'master' of github.com:STEllAR-GROUP/hpx
Performance Counter docs
Performance Counter name unification, more docs
More performance counter docs
Finished documenting existing performance counters
Fixed #466: Compilation Error
Performance counter docs, minor tweak to query_counters API
rozsireni spravy titulu o pridavani autoru a klicovych slov
Update package version
0.3.6
Abstracted the JS a bit; changed SCSS and HTML accordingly.
Made the JS work on lis instead of figures. Changed the Stories navigation accordingly.
Changed the styling on the Photos pane.