- fixes XSLT crash if more than one title defined for the experiment

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@19888 2913f559-6b04-0410-9a09-c530ee9f5186
added top species and top arrays to the popups, calculated dynamically (>= 250 experiments for the species, >=150 experiments for the arrays)

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@19901 2913f559-6b04-0410-9a09-c530ee9f5186
removed non html conformant attributes

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@19902 2913f559-6b04-0410-9a09-c530ee9f5186
oops, removed sorting that was commented out for debugging

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@19903 2913f559-6b04-0410-9a09-c530ee9f5186
- fixes small problem in ae reload schedule

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@19917 2913f559-6b04-0410-9a09-c530ee9f5186
fixes "assay by molecule" and "assay by instrument" options - they are dynamically loaded from EFO now

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@19936 2913f559-6b04-0410-9a09-c530ee9f5186
oops, forgot to double-quote options

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@19937 2913f559-6b04-0410-9a09-c530ee9f5186
- fixes a crash when sorting by experiment title

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@19948 2913f559-6b04-0410-9a09-c530ee9f5186
Atlas data will be updated on start and at 1am daily with retry every hour if failed

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@20015 2913f559-6b04-0410-9a09-c530ee9f5186
added a control for that

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@20016 2913f559-6b04-0410-9a09-c530ee9f5186
- slight refactoring of job controller

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@20020 2913f559-6b04-0410-9a09-c530ee9f5186
slight fix for files scanner (so it works if files have spaces in their name)

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@20040 2913f559-6b04-0410-9a09-c530ee9f5186
slight fix for files scanner (so it works if files have spaces in their name) - part2

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@20046 2913f559-6b04-0410-9a09-c530ee9f5186
fix for the EBI footer iframe which got cut-off from the right hand side after "cookies" section has been added

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@20048 2913f559-6b04-0410-9a09-c530ee9f5186
- fix that sets ArrayExpress_label priority when defining EFO class term value

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@20083 2913f559-6b04-0410-9a09-c530ee9f5186
- fix that fixes ArrayExpress_label priority when defining EFO class term value

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@20084 2913f559-6b04-0410-9a09-c530ee9f5186
- added a debug mode
- fixed miscalculated colspan in header for factor values

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@20086 2913f559-6b04-0410-9a09-c530ee9f5186
- changed version of saxon so it works with oxygen 13.2

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@20087 2913f559-6b04-0410-9a09-c530ee9f5186
- changed sample sdrf xml (taken from Illumina Body Map sample)

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@20088 2913f559-6b04-0410-9a09-c530ee9f5186
- added links to ENA and Ensembl for sequencing data

git-svn-id: svn://bar.ebi.ac.uk/trunk/arrayexpress-interface@20093 2913f559-6b04-0410-9a09-c530ee9f5186