labofsahil/github-event-dataset-2012 huggingface dataset:
PICARD_HOME was not set in parameters file and not called in several protocols. I fixed this.
Replaced sequenceVariant with Variant and adjusted vcf to pheno

Replaced sequenceVariant with Variant and adjusted vcf to pheno
Small fixes to simple-setup.py

I fixed a few argument handling issues int simple-setup.py.
Fix different links in templates (due to sub-groups)

Subgroups weren't heavily tested in templates. I found different bad links, and fixed them so I don't get much 404 when doing a wget --mirror from a munin directory.

The ones I still get are from a bottom-navigation links in comparaison pages, when peers doesn't have any comparaison available.
Gentoo fixes

A few more of them.
commit: sample11

cron test3 @redmine.
Heroku deployment instructions

Instructions on how to deploy to Heroku.

Robbie
qp log fixes

Some minor fixes to the `qp` script.

- Usage hint was logged twice when parameter was wrong and no queue path was given.
- ``print(msg, sys.stderr)`` produces ugly output in Python 2.x.
Adding Drush plugin

Hi!  Thanks for the awesome project.  I've been using it since last winter and was shocked yesterday to find out that there's apparently no Drush plugin - a command line tool for Drupal.

This is my first pull request, so forgive me if I'm doing this wrong and feel free to let me know...
Adding new theme, which is an adaptation of the 'simple' theme. Less fancy and more simplistic.

Hello, 

When I started using oh-my-zsh I was looking for the best theme available. Unfortunately I could not find the perfect one from me, but I found the *simple* theme and it was more close to what I wanted so I patched it and created mine, called *simplest*.

I've taken a screenshot of the theme:

![Simplest theme for oh-my-zsh](http://dl.dropbox.com/u/7743293/simplest-theme.png "Simplest theme for oh-my-zsh")

Please add my theme if you think it deserves to get added to the repo.

Thank you for this project.
Region Selection
Further changes over SIO-1093
updating deps.lock to reflect the recent changes in some deps

As the UserBundle and the MediaBundle were changed not so long ago, I thought it would be good to updated the sha1 commits in the deps.lock file for those two, on the 2.0 branch.

I'll try to make a new PR for the master branch, as these hash should be different.
Some improvements to handlebar

The main features added are:
* Fixed a bug when handlebar tried to receive a request ending with "/"
* Added an argument to pass the *templates dir* and make *mocks dir*default to the same dir of templates.
* Added MIME type config by file.
* Support for friendly error pages (like 404.html and 500.html).
Update PSStackedView.podspec

Removes Clean paths, adds ARC requirement, and License

This spec passes lint and has been pushed to the Specs Repo
Fix bug in rake task file exclusion

The "exclude_js_files" option would only work if "js_files" was also
set, which does not seem to be the desired behavior. For instance, this
patch allows specifying a pattern to match and then using
"exclude_js_files" to exclude specific files matched by the pattern.
Facility to easily configure URL custom buttons in config.yml

I have committed code to enhance https://github.com/stfalcon/TinymceBundle/issues/39

From now, it is possible to take custom button icon from the site by specifying the URL in this form:
"asset[path_to_icon_]"

It is like the twig function asset()
Brazilian date format

Is commom here use 20/01/2011 I was missing it in my projects =)
Fix crash in ninja generator

Hello,

toolChain() seems to (legitimately) return NULL before QtCreator is properly configured. This happened to me and I tracked down the bug in your branch. This should fix that.
Added Sogou as a core member of Tengine.

Tengine is now developed by Taobao and Sogou.
Delay the runPhantomjs resolve until the process outputs something

Hey, awesome stuff here.

Had some problems running this though, got the "No slaves captured, session not created." error almost every time.
runPhantomjs seemed to be resolving before it had captured the buster server.

So I changed it to wait for some output from the process and then resolve. Doesn't feel like the best approach though.. feels overly slow too.

Are you running this part without problems?

Adding this as a pull request for discussion.

Cheers
Infamous "postWorst not found!!" problem in case of bad GPS signal fixed

Verified with pausing a Condor for some time and then resuming the simulation. Also checked that passing 00:00 UTC does not produce any OLC specific errors in RUNTIMIE.LOG.
Fail silently if Growl was stopped after Slic3r was started
补充提交新增文件
tiny optimization

Tiny optimization for better performance. See http://jsperf.com/01-vs-100
youtube-dl 2012.02.27

Bump youtube-dl to version 2012.02.27
Edited to allow for searching strings of segments rather than just indiv...

...idual segments. Strings should be separated in input by commas. (Default setup for TD Deletion). Edited code segments are commented at their start. For strings of >1 segment, Word Context is taken into account, but Search Pre and Post and Stop Pre and Post Context are necessarily disregarded because if DON'T is found as D OW1 N, the context pre-context would cause it to be ignored.
Game.IsMouseVisible implementation for Windows
gearman-php fix for non-/usr/local Homebrew installs

Fixes the configure error when trying to install gearman-php (by specifying the --with-gearman option).
Updated foundation's app.js file to the latest version

Updated Foundation's app.js to the latest version allowing to close alert boxes and adding dropdown menu functionality.
More Cleanup

No breaking changes.

* Removed left-over Command-T stuff.
* Documentation for setting up dependencies.
* Documentation for fixing ctags issues.
* Ignore changes within submodules when running `git status`.
add 'escodegen' to bin 

add new command and fix help message in `escodegen`
escodegen: Don't crash when we have an empty array of leadingComments

See patch. Right now doing something like:

    var node = { type: ...,
                 leadingComments: [] };
    escodegen.generate(node, { comments: true });

will fail.
Refactor

Rubygems needed to be included when loading the gem into irb. Removed the include AwesomeUsps as it probably should be added to the global namespace.
As discussed in title options topic

Need to re-create language .pot file please.
Adding in my project info
Mod Arc phase 2

Initial implementation of code support for mods is done, so may be a good point to merge back into develop.
Nowe filtry

Dodałem sepie, solaryzacje, korekcje gamma, rozjaśnienie obrazu, przyciemnienie obrazu
sorry, I fixed spelling and grammar after  a nap, and it's much better, I won't fix anymore though I promise
Fix for failure Rack::MiniProfiler (rake spec)

Fix for 'Rack::MiniProfiler with a valid request has a functioning share link', when running 'rake spec'.

  1) Rack::MiniProfiler with a valid request has a functioning share link
     Failure/Error: get "/mini-profiler-resources/results?id=#{id}"
     ArgumentError:
       wrong number of arguments (1 for 0)
     # ./lib/mini_profiler/profiler.rb:130:in `round'
     # ./lib/mini_profiler/profiler.rb:130:in `serve_results'
     # ./lib/mini_profiler/profiler.rb:139:in `serve_html'
     # ./lib/mini_profiler/profiler.rb:195:in `call'
     # ./spec/integration/mini_profiler_spec.rb:75

Running on:
    interpreter:  "ruby"
    version:      "1.8.7"
    date:         "2011-12-28"
    platform:     "i686-darwin11.2.0"
    patchlevel:   "2011-12-28 patchlevel 357"
    full_version: "ruby 1.8.7 (2011-12-28 patchlevel 357) [i686-darwin11.2.0]"
make lightweight version of 'with'

The `with` binding currently uses the native template template engine, which adds a lot of overhead. The main purpose of the `with` binding is to push a new binding context to the stack for child elements (doesn't affect any other bindings on the same element as `with`).

`with` also does an `if` with the target of `with`, which often isn't necessary. Removing the templating code under `with` would also remove the `if` functionality.

The new `with` should still work in container-less bindings.

See https://github.com/mbest/knockout/issues/9 for more discussion on this.
Correcting vigilance, taunt cd refreshing part. Corfen

closes issue #410
build: Fix configure output

Fixes issue #1.
It's except, not exclude

It's except, not exclude according to https://github.com/apotonick/representable/blob/master/lib/representable.rb#L72
Fixed warnings about unused functions and variables

Certain messages could cause variables or function clauses to be unused.
If 'warnings_as_errors' was passed in as a compile flag, this would cause
compilation to fail.  Messages are checked, and unused functions/variables
are removed/escaped.
added blur option to settings, and show your tour with blur
Script to collect Bio2RDF dataset statistics
minitest-rails not working when no ActiveRecord::Base defined

Fixed it in the last commit
Development

Pushing my dev to your dev for now.
Refactor of grid code.
set default check type to http

Fixed in the code, checked that it works.
[Di] Update the config to the latest API

see https://github.com/symfony/symfony/commit/8775f2c17ce8da1ae89269ddf2692a0c79ec7f3e
Added a simple composer.json for Symfony 2.1 support

hey there,

I wrote a simple composer.json, nothing special. But you may want to use it as well :)
isSameMonthAsDate fix

Hello,

I fixed the issue with comparing two dates based on month and date only (isSameMonthAsDate). There was [CURRENT_CALENDAR components:NSYearCalendarUnit... but it should be [CURRENT_CALENDAR components:NSYearCalendarUnit|NSMonthCalendarUnit.

Please accept the pull request and add the patch to your master.


Thanks, 
Michal
use underscore and classify instead of downcase/capitalize when referrin...

...g to class names
totally new

int
Lps 29264

LPS-29264 - Documents and Media portlet allows publishing of file upload without actually uploading file
fix: throw a notification to upload file
LPS-30541

remove unnecessary paginate function for categories (detail: see LPS-30541)
LPS-29989 Clicking <<Back on Blogs Entry does not redirect User to origi...

as for bug fix detail please see LPS-29989
Fix documentation links for readme.

As per title.
removed RouterFactory, created Router class instead

Není tam ta factory zbytečně?
new switch -g --shebang to prepend shebang to compiled Javascript

fix for [issue 2215](https://github.com/jashkenas/coffee-script/issues/2215)

Fixes the following fail:

    $ cat hello.coffee
    #!/usr/bin/env coffee
    console.log("hey")

    $ ./hello.coffee
    hey

    $ coffee -c hello.coffee

    $ ./hello.js
    ./hello.js: line 1: syntax error near unexpected token `('
    ./hello.js: line 1: `(function() {'
Removing extra line in the end

I changed the behaviour of the plugin so it doesn't add the extra line in the end of the textarea. I my case I needed to save some space.
Default config templates and RubyCAS

This wasn't working out of the box with RubyCAS. I rewrote bits of the default config templates and now it does.

I also included a basic test user - for ease of testing a basic setup:
uid: test
userPassword: pass

Also, thank you for writing the majority of this. I'm glad I didn't have to write this module from scratch.
Use os.execvp() rather than os.system()

This change causes goldenarch to use the `execvp` syscall to start gunicorn rather than `os.system()`. At the moment, even if you can successfully kill the main goldenarch process, gunicorn (and it's worker threads) often keep running, requiring a `pkill python` or similar. This resolves this issue by replacing the main process with the gunicorn process, delegating all signal handling to gunicorn.
Small fixes

Small fixes - removing remaining rounded corners and `<hr>` gradient from the `docs.css` and from the `bootstrap.css`.
V2 pre rel acceptance tests

Conference management updates for latests UI changes
Bitbucket multiple email bug.

Found a bug where if a bitbucket user has multiple email addresses associated with their bitbucket account, it would currently take the top one which was not necessarily their active primary address.

Now takes their active primary email address and if one can't be found (I assume this is impossible but thought I would put it in just in case) will retrieve the first returned active email address.
Use a default string if not included "to"
ngx_pagespeed.cc: use an anonymous namespace

use an anonymous namespace instead of the static keyword to restrict visibility to this file
[1.3] Removed SqoopUtils.asBoolean()

Replaced SqoopUtils.asBoolean() with VariableSpace.getBooleanValueOfVariable() to reduce code duplication.
fix #1412
Fix changes in openshift environment variables 

Some variables such as OPENSHIFT_APP_DIR no longer exists. This fix also stick django version to 1.3 to avoid issue with some deprecated features in 1.4.
Allow you to copy to.../move to… into all packages/bundles. Fixes #1068

With the new `indirectTypes` options, I'd originally made it so you could only copy to folders
lolfix

- deserializeBson() now correctyl handles null pointers, aka Type.Null bson objects
export only selected contacts from addressbook

extend the addressbook export function to pass the contact id(s) of selected contact(s) to be passed to the export script so only those contact(s) are exported.
Improve Gtk3 and GtkSourceview3
User registration

[28498439] User registration complete

To test it is necesary to go to /#!/user/registration?email=juanpgaviria@gmail.com&code=123erwer3243 submit the form and test the username in the topbar in the right side with username(email).
Merci de prendre en compte mes modifications.
Update lib/tropo-webapi.js

Added voice param to record
Reorg and JSMVC jQuery UI theme

I moved some of the old files that were in the root folder and looked as if they belong to the grid (I think they need to be updated anyway). I also added a more JSMVC looking jQuery UI theme, currently looking which widgets could support that.
Create oracle branch.

Hi Dear!

A new branch called 'oracle' has been created. 

All oracle projects' development will use this branch.

/renga
Allow short commands like vim
bukkit repo url update
Fixed  a Y problem, while falling under bedrock

Fix of some produced exceptions, while falling down to like -700, where the server tried to create this chunk.
Module Arkeogis lang files

modified:   lang/de_DE.js
	modified:   lang/fr_FR.js
Add multi-axis support for more than two axes.

I have implemented multi-axis support which allows any number of independent axes to be defined. Only one axis can be shown at a time though, so it is by default coloured to that of the associated data series.

When the "showAxis" option is used, specifying a data series, separate independent axes are generated for each. This allows separate value ranges to be set for each data series as well as allowing some axes to be be defined with an integer y axis.

Please see tests/multi-y-axis.html for examples of it's use.

- Add "showAxis" option to display an independant Y axis.
- Add "colourShownAxis" option to colour a shownAxis the same as it's data series.
- add "integerYAxis" to only display integer y-axis labels.
Workaround for invalid timezone offsets

Another attempt to address #697828 - this one is much more consistent with the cgit implementation and includes a test.
Add more unit tests for Post#prev, Post#next

Just to be sure...
A number of fixes to support ongoing changes to okfn/annotator-store

I'd appreciate any and all comments. See http://lists.okfn.org/pipermail/annotator-dev/2012-January/000188.html for the context of these changes.
Depending on rake for development

  - Since the Gemfile exists for bundler setup, so does rake become needed in the gemspec.
Grain that reports saltversion
Only load nginx on machines that have nginx installed

Based on changes to the apache module (#496) I've also made sure the nginx module only loads on machines that have nginx installed.
Cleanup to logging code in saltkey

Renamed functions to be more discriptive. Cleaned up code to use hasattr instead of checking to see if level is None, this seems better to me since now the logging level provided does not exist it will just be ignored and the message will still be printed to the console.
Typos

Just a small typo.
NXCM-3900: nexus-maven-plugin depends on artifacts not in Central

Hence, it's unusable unless you access RSO too to grab those ("patched" mainly) artifacts.

Most notably, Apache HttpClient 3.1 is patched and is used "almost everywhere", even if that patch is actually needed in Nexus CommonsHttpClient RRS implementation only.

Commons Beanutils Core (and -bean-collection) was also "patched" ones, due to [BEANUTILS-379](https://issues.apache.org/jira/browse/BEANUTILS-379) but in this pull it is reverted to "vanilla" ones (available on Central) and tuned Tattletale configuration instead.

This should make nexus-maven-plugin (and actually any Nexus Restlight Client user) able to resolve dependencies from Central.
[NEXUS-4851] Upgrade to Jetty 8
Redesigned marketing site. @gsong, please review.
Moved saml.properties to connect core lib only.

Deleted all saml.properties, keystore.properties, and truststore.properties in gateways.  Added them to CONNECTCoreLib resources.
Rene dev

- Added build number to DTVersion
- Version number in DTVersion is parsed using a regex instead of the NSScanner
- Added Cleanup to DTDownload
Prevent MSIE8 from choking on "Operation Aborted" errors.

Trying to append to document.body during load time will halt the rendering process and leave an unfinished document.

closes #11
Make tokenizer filter to recognize double quoted values so it will not b...

...reak on whitespace in a quoted value string

With this I can use tokenizer filter for our Astaro firewall logs with success:

2012: 10:18-16:20:47 ulogd[6288]: id="2002" severity="info" sys="SecureNet" sub="packetfilter" name="Packet accepted" action="accept" fwrule="7" initf="eth0" outitf="eth2" srcmac="xx:xx:xx:xx:xx:xx" dstmac="xx:xx:xx:xx:xx:xx" srcip="172.16.3.145" dstip="10.1.1.5" proto="17" length="74" tos="0x00" prec="0x00" ttl="126" srcport="55200" dstport="53"
Branch data

Yay, we have repos/branches for all roles
add ocaml-uint-1.0.2
Tool to summarize survey results #1357

This may be obsolete when we store an "exploded" version in the db - but for now it's useful, so I'm checking it in in case anyone else wants to use it.
Use /etc/profile to initialise DISPLAY and update ld cache.

Skip steps included in the README that the user has to run on each load of the chroot
Adds inverted 4x1 and 4x2 widgets to apollo

Heck we all know everyone loves black backgrounds with white text and since themes can't change the widget. An option is a nice touch.
A few updates to the norwegian translation

and added myself to the readme file :)
github username has changed

Discovered a small typo in the docu while installing your bundle via deps file
Add window resize handling to keep drop down properly positioned

Hi, I was trying to use this plugin but noticed that when the window was resized with the dropdown open, the dropdown doesn't move itself to be properly positioned.  This adds that functionality with two quick statements (I think a more elegant way to handle this would be to make the CSS automatically keep it in the right place, but this is a good quick fix that looks fine).
updated Chipmunk test to latest API
Presentation

small fixes for the presentation
When we run the policy we do not want the view for site to be set automatically.

When the webmaster selected a different view, and runs his policy again, his frontpage is changed, we dont like that.
comments in index.html

there are questions for you in index.html and app.py
Allow to use a string as iterator of _.sortBy()

If the iterator is a string instead of a function, sorts by the property named by the iterator on each of the values, as _.groupBy() does.

e.g.)
_.sortBy(["one", "two", "three", "four", "five"], 'length');
=> ["one", "two", "four", "five", "three"]
New nrpe_command type
Use new Route53 API, implement http retries, improved logging, security ...

...and much more.

Full Changelog:
+ Update to newer Route53 API: switch from "2010-10-01" to "2012-02-29"
+ Implement HTTP retries (applies to webserver probe as well as API communication)
+ Switch from wget & lynx to curl, which is more robust and less error-prone.
+ Improve logging on multi-line output (requires GNU awk)
+ Validate AWS credentials once per hour. This ensures our credentials are always working, even if we rarely send an update to Route53.
+ Security: Enforce strict file permission to avoid leaking AWS credentials (detect if script is chmod'ed to 700)
+ Security: Switch from SHA1 to SHA256 when submitting updates to AWS
+ Improve detection of DNS resolution problems
+ Improve AWS signature generation on non-Linux platforms (use 'printf' instead of 'echo', which was causing problems on OSX)
+ "base64" is no longer required (switched to "openssl enc -base64")
+ Improve detection of status changes and avoid sending API updates when not needed (also added a "--force" argument to force an update at any time).
+ Lots of logging improvements: show current production hosts when updating Route53, show how many hosts are up/down/disabled when no update is needed, show http code returned by the API, and more.
+ Initial work on email notifications (see documentation on the "mailNotification" function)
+ Initial work on multi-site probing (see "proberesult" file)
AUI-766 - IE7: pop-up overlay mask doesn't show

http://issues.liferay.com/browse/AUI-766
prevent caching the decoded response across test requests
Module Updates

Updated versions of the Pages and TagsMap modules.
[RJA-822] Incorrect duration for running workflows is displayed
[RJA-1106][fix]: Return null in case of missing property of $env is referenced in DSL
!

Ei oo nyt mitään kysyttävää. Tuun paikan päälle ilmiantamaan itseni varmaan huomenna.
fixed tests and config.json.example, plus added createTask API call
Fix/clarify some points in doc/Deployment.rdoc.
Enable creating user glossary
Add optional/configurable backtrace to Advanced Format and Graylog2 loggers.

Backtraces are already included in Mage::logException calls, this adds them for Mage::log calls as well (which includes PHP notices/warnings).

Max Backtrace Lines configuration controls how many lines to include in the backtrace. Defaults to 0. Method arguments are shortened to 30 characters. File paths are abbreviated.

Any chance I can get direct push access so I don't have to use pull requests each time?

Thanks,
Colin
History map

Marijn wil jij plox mijn push accepteren? Ik heb een history folder aangemaakt met een leeg bestandje er in (placeholder), en daarmee een aantal errors gefixed! (Omdat jij dat zei).
javadoc-test-mark

Just a test pull request
Added an option to only allow panning the UINavigationBar of the root view controller

If you push a view controller (or several) you can still pan the navbar to show the menu.  I saw this as a bug initially, thinking that you should only be able to pan the root view controller, and subsequent VCs should just have the regular "back" button but no panning.

In the end, I made it an option.
Add array/toLookup

I added the utility method `array/toLookup` to index the items in an array for fast lookup from an object. I'm not sure about the name, so if you have a better idea for the name I can change it. I added some passing tests for it also.
Fix for TestProfile.test_browserid_link_present

Updated browserId link
Add "cache_options" key, which is forwarded to MemCached.  Used for "expires_in: 3.days" functionality

I often have data that goes stale, even if the cache-key is the same.  For example, I'll render "3 days ago", which needs to expire after a day.  Or, I'll pull in the build-status into our dev bar from CircleCI.  No cache-key, but I only want to poll every 5 minutes.

This pull request adds support for the key "cache_options" in the render call.  Any options passed in are forwarded to the Rails.cache.write call, which will take care of forwarding on to MemCached.  More options are described in the [Rails Caching guide](http://guides.rubyonrails.org/caching_with_rails.html#activesupport-cache-store).
fix typo of table-name in last migration

just cloned the repo and tried to set it up locally, but the last migration failed ;-)
was just a singular/plural typo. 

migration: 20120819104219_drop_countries_transcription_information_table.rb

-    drop_table :countries_transcription_information
+    drop_table "countries_transcription_informations"
Merge in disabled themes for audio player and realPlayer based on dc.source.uri

Some old branches in the code referred to an audio player within the snazy theme, and a realplayer theme. These aren't used or referred to anywhere, so merging them in will not break anything. Since they appear to work based on various content in a dc.source.uri, they could be useful if enabled selectively.
Small update to models.py

Updates models.py with correct absolute urls, abstracts scrollers into its own template
Integration of last tags towards 1.1.0

This is a dummy pull request, as I'll manage the request acceptation on the other end.
Reduce query number
Fixed #230

Instead of relying on Github Token which is not supported anymore, use the basic auth and create the repo using github_api .

Alos , removed tests related to Token
Jira issue: WP-260

First version of Android geolocation binding.
Add shard info (q,n) to db_info

BugzID:11171
bumped crunch dependency in scrunch/build.sbt to 0.2.0 to match scrunch/pom.xml
[Bug 728710] Localize Highcharts short-months

r?
[bug 728388] Make Firefox 11 the default.

One last small one before jumping into the /questions changes :-).
[DoctrineBridge] Iterator->current() is not the same as current(Iterator)

More lively discussion from: doctrine/DoctrineMongoDBBundle#84.
Removed NAVBAR dict from settings (not sure how this hung around)

This should have been removed when the new navbar implementation was done. Not sure how it hung around.
rakelib/builder.rake: Build framework/Info.plist on `rake`.

rakelib/builder.rake: Build framework/Info.plist on `rake`. Fixes https://www.macruby.org/trac/ticket/1440
Add user to tenant

added function to add user to a tenant
Fixed addmultisigaddress if looking up public keys from locked wallets.

Use GetPubKey() instead of GetKey() when looking up public keys by in-the-wallet-bitcoin-address, so addmultisigaddress works correctly with encrypted, locked wallets.
Java2html plugin

I added the Java2HTML Gradle plugin to the Griffon build. The index page still looks very spartan but I'd be happy to improve the CSS layout. It would be great if you could give me some feedback about how you'd envision it. Also please let me know if you run into any kind of issues.
remove calls to meaningless ZMQStream.on_err

The event meant to trigger this callback can never occur, and the method will be deprecated and eventually removed from PyZMQ.

Also removes commented-out original implementation of Kernel.start.
Wx gui example: fixes the broken example for `%gui wx`.

Applied the fix contributed by @piotradam in #645 and tested that things now work correctly.  It seems our Wx code was OK, it was just a problem with the example.

Many thanks to @piotradam for the key fix!

Closes #645.
Add texture-combining of an RGB(A) and a Luminance/RGB(A) texture

Add texture-combining of an RGB(A) and a Luminance/RGB(A) texture to MeshBasicMaterial.
    
Introduced new field "mapAlpha" that specifies a texture to use as the alpha channel.
Extended loadTexture() for custom texture formats, e.g. THREE.Luminance.

Usually, the alpha channel is embedded in the graphics used as texture. This patch allows setting a second texture "mapAlpha", and the basic shader has been extended to use the first channel from this texture as the alpha channel. As I use grayscale PNG images as mask, I extended the load image function to accept a format parameter.

Example:

```
zmesh = new THREE.Mesh( geom, new THREE.MeshBasicMaterial({
	map: THREE.ImageUtils.loadTexture( "image.jpg" ),
	mapAlpha: THREE.ImageUtils.loadTexture( "mask.png", {}, function(){}, THREE.LuminanceFormat ),
}));
```
Resizing Speed Dials + eye candy

This adds ability to define the size of Speed Dial thumbs, so users can have more of them fit to one page (on low res screens). Also this commit adds some eye-candy to the Speed Dial settings box.

Preview: http://img26.imageshack.us/img26/5453/qupzilla4.jpg
Added $prepend parameter to \Mockery_Loader::register() to be able to register the autoloader as first even after other autoloaders have been registered

We really need this because the default autoloader handles all files and the Mockery autoloader cannot be registered before it (in the code) in a clean way.

It's only a small addition with a default value to preserve the current behaviour so please add it.
Quick game and other API updates
Allow replies to be excluded
Readme

Updated the instructions to reflect the serby's new GitHub username.
[ClassLoader] Added a class map file generator utility

Bug fix: no
Feature addition: yes
Backwards compatibility break: no
Symfony2 tests pass: yes
Fixes the following tickets: #2407
resque job definitions
Made set_param's argument `--value' optional (refs #824)

Also:
- Changed `wsh.php' to allow --arg="" (empty value)
Support Background Image

背景画像の取得部分に問題があったのでパッチを当ててみました。

コンテキストメニューに追加する部分はこんな感じかなぁって程度です。

Chromeのコンテキストメニューって使いづらいですね。
captioned images fix
Started channel changer

started channel changer

Also changed rake start so that it will start with defaults and it takes a NICK env var
Go on

I have just updated the version number
Mfiddle2
This modification changes the link title to "this great link"
Text

HerpDerp
AMQP-226 Fix Exponential Back Off

Previously, for stateful environments,the
multiplier had no effect and the backoff
policy always slept for the initial interval.
Jm create application

This finishes off the functionality for task 39 (Create list my applications view + template + url conf + tests)
Fixed coding standard violations

Hi Vinai,

just run the code against the Magento 2 coding standard and fixed the violations:

* Replaced tabs with spaces
* Removed inline control structures
* Changed opening braces for if/else/etc. structures
* Changed indentation of lines
* ..
Add GdsApi::Rummager

This is basically Whitehall::SearchClient moved and renamed. I changed the test format a bit but not what they're testing. The idea here is that this code could be used in some forthcoming mainstream work, but also that this sort of code would be good to bring into a shared place.

There is more work to do to bring this more in line with the way the other API Adapters work but I wanted to share it early.
2.10 Build

This enables a 2.10 build and fixes the non-wagon connectors.
Adding SaaS-Class to list

This will fix issue 12.
Additional test step definitions

I've implemented a small fix and some additional test step definitions that you may want to merge back into calabash-android:

1. Small correction to build.xml to get Calabash building (missing $)

2. Wait for and assert that a particular UI screen appears:

    Then /^I wait for the "([^\"]*)" screen to appear$/ 
Waits for a particular screen (Android Activity) to appear.

    Then /^I wait upto (\d+) seconds for the "([^\"]*)" screen to appear$/ 
Waits for a particular screen (Android Activity) to appear with a timeout.

3. Some support for documenting manual test steps within automated test steps:

    Then /^I compare the current screen with the reference image "([^\"]*) manually"$/
Embeds reference image in Cucumber formatters that support image embedding.

    Then /^I manually (.*)$/ 
Document that manual tester should perform a specific step. Does nothing during an automated test run.
Shell

Version 1.3
Nowe angielskie przysłowie
Linien lokal vorzeichnen

Diese Änderungen sorgen dafür, dass die Line lokal transparent vorgezeichnet wird. Sobald der Server die Anweisungen verteilt hat, wird die Line in voller Farbe nachgezogen. Dies ermöglicht einerseits eine direkte Rückmeldung an den Nutzer das etwas passiert, andererseits sieht man trotzdem das noch gearbeitet wird.
Use regexp to find multi-params

I think it's nicer and cleaner way to do this.
Jp65

Fixed RiverWalk app with Mikes help, and optimized GeneralPictures app.  Closes issue #65.
Parser for Apple's LLVM Clang front end compiler
Creeping ads

Merge creeping-ads into master
getblocktemplate

Needed for continued P2Pool support
mdadm: version bumped to 3.2.6.
LPS-27530

LPS-27530
GridIO append mode

I've added append mode to GridIO: useful if you want to sequentially update a file (ie. mp3 streaming).
modified name of README file in gemspec, could also just rename README.markdown

renamed README to README.markdown to stop getting a Gem::InvalidSpecificationException during rake
use a basic but real properties parser instead of parse_ini_file()

This is a basic parser for properties file that allow having strings with or withour quotes (unlike parse_ini_file() that requires quotes). If there are quotes, they are just ignored.

Possible syntaxes:
title = Hola
title=Hola
title = "Hola"

The only thing missing is multiline support with \ but parse_ini_file() doesn't support it either.

This way, when you put the files in Transifex, people don't have surrounding quotes in their translations.

Feel free to test locally and merge if you like it.
Update

Textures and sided inventory access now based on side/orientation lookup table.

SMP tested with RedPower, all orientations seem bug-free.
Android/Analytics: Update for 1.6.0
update Analytics plugin for Android to work with phonegap cordova 2.0

moved current plugin version to sub-folder 1.6/ for older versions of phonegap
added new sub-folder 2.0/ for phonegap 2.0
Csrf

Added functionality for cross site request forgery.
Imread URLs

This PR allows imread to open images from URLs. I'm not sure if it's common enough to be useful, but it might be useful.

I'm not sure about adding a test. It might be weird to require an internet connection to run tests.
Add functions to join and relabel segmentations

Hey guys! Hope things are going well since SciPy.

Recently I've needed a function that would take the "intersection" of two segmentations, which I've seen referred to as the "join" (see for example Marina Meila, "Comparing clusterings -- an information based distance", Journal of Multivariate Analysis, 98, pp 873-895, 2007.). Given two segmentations S1 and S2, the join J is the segmentation in which two voxels are in the same segment if and only if they are in the same segment in *both* S1 and S2.

(I could rename this "intersect" if you prefer, but I haven't seen that name used before.)

A helpful function for this is one that relabels a segmentation with arbitrary (integer) labels to 1...num_labels, so I added that.
MRG some cleanup in grid_search.

Closes #777.
Don't use colors in output when output is not an interactive shell 

When piping phpunit output to less or some other program, the ANSI codes for colors show up as literals instead of changing the colors out the output.

Ignore the --colors option when the stdout is not a tty.

If it cannot be determined if stdout is a tty (e.g. the POSIX extension is not installed), then the --colors option will be honored.
Allow custom fields by extending the FormBuilder

I have a project with a custom field like so:

```ruby
class MyCustomFormBuilder < ActionView::Helpers::FormBuilder
  def custom_field
  end
end
```

When I added `bootstrap_forms` to the project, I could not use the same functionality. This commit mimics the way ActionView did it (mostly).

So now I can say 

```ruby
class MyCustomFormBuilder < BootstrapForms::FormBuilder
  def custom_field
  end
end
```

and pop it into the bootstrap_form_for :builder option or put this in an initializer

```ruby
BootstrapForms::FormBuilder.default_form_builder = MyCustomFormBuilder
```
Update package.json

Fixed the ability to install via npm due to bed7f7170123389a2a33910a3b66d574b57d203c
Modify Cashtag regex

Modify Cashtag regex a bit to make it compatible with the twitter-text-js change in https://github.com/twitter/twitter-text-js/pull/64
Textures Update!
Add figure scripts test & fix file creation bug #9014
Add nvm completion

Add [nvm](https://github.com/creationix/nvm) completion
You may find this presumptuous

... but the way you are using quicklisp as an ad-hoc system loader shows quite a bit of gumption, but it's a perfect example of how 'python-ing your way through' in lisp, produces the wrong result. I've used quickproject to create a project skeleton for pappy, and I moved the rudimentary code you had in pappy.lisp into that skeleton. The result is a system that is itself quickloadable. if you check out this repo into your local projects directory or into a directory on your asdf:*central-registry*, then you will be able to (quickload :pappy).
Provide the installed size (for Debian packages)

The Ubuntu Software Center complains that there's no Installed-Size field in the control file, that the package is insecure, blah blah.

So, provide the installed size.
Add user file

Im not sure how it will handle the special character ```í```

(thanks for this useful tool!)
Fix prepare-commit-msg to work on non-GNU platforms (e.g. OS X)

Non-GNU versions of sed don't necessarily understand "\n" as a newline, and, at least in the case of OS X, don't like -i without a value.
Added support for XML as response type

Check switch for content types for the new codelines....
General cleanup, fixed javadocs, some typos, made trees better!

All in the title ^.^

Signed-off-by: ZNickq <teapa011@gmail.com>
Better images

Pink -> Girls
Blue -> Boys
minor change

PHP errored in markdown function trying to treat the $args default value (null) as an array.
This change defaults $args to an empty array() rather than null.
Update assetfile and remove relative requires
[JBWS-3413] java.xml.ws.spi.Provider resolution is JVM implementation specific

Do not export META-INF/services declarations from org.apache.cxf module; those are to be overridden by jbossws-cxf modules, however IBM JDK messes up with resources ordering, causing wrong javax.xml.ws.spi.Provider resolution. Hence we need to avoid duplicated META-INF/services being exported.
forgot to include the defines method for upstream merge

This should fix https://github.com/jordansissel/fpm/commit/6c76ecb1ea6e63b9745eb425a824252dd9e9dd83#commitcomment-926306
Update ui/jquery.ui.sortable.js

This adjustment is a proposed fix for bug #4759 (http://bugs.jqueryui.com/ticket/4759). Basically the connectWith option shouldn't have any effect (doesn't need to) on initialization, but should come into play on each drag.

This change just records a variable "ready" which is set after initialization. An if statement within _refreshItems() isn't executed until this variable is set to true.
some supervised learning team fixes

added input_space and Model inheritance to classifier.py (logistic regression)
ひらがなの「く」

……を、書き直しました。
bumped min version of rspec

just bumping the min dev requirement of rspec to 2.8 (specs pass)
Issue 8098 - Inner class method can modify outer's members regardless of constancy

http://d.puremagic.com/issues/show_bug.cgi?id=8098
Issue 8221 - typeof(null) rejected as return type for covariant overrides

http://d.puremagic.com/issues/show_bug.cgi?id=8221
7790 CTFE wrong code for AA foreach ref

1. IndexExp: Stop copying the AA whenever it is indexed (This was horrific for
performance, as well as being wrong).
2. aaApply: If the value is 'ref', create a reference to the value (using an IndexExp).
Another fix for Issue 3144 - Invalid break accepted

http://d.puremagic.com/issues/show_bug.cgi?id=3144

This is another pull request for issue 3114, which against #660
setting the TUIO port now works

Signed-off-by: Benoit Jadinon <raz-l@raz-l.com>
Display more config information

Most of the other constants are echo'd to the user I would find
adding this to the output helpful.
Add isSorted method

Returns true if the given key is the sorted column

This makes it easy in a view to ask the pagination if the given column is currently sorted.

E.g.

```jinja
<th{% if pagination.isSorted('u.email') %} class="sorted"{% endif %}>{{ pagination.sortable('Email', 'u.email')|raw }}</th>
```
Bug 3913

Bug fixed with some minors one discovered when testing the classification of publications.
Added shell-version 3.6.
New Windows Store updates and JavaScript versions of the remaining updates.

At this point, only the dotnet versions are OK to publish. We are hoping to get PM review by Wed on the new JavaScript tutorials.
stepWorld function

Just another small train journeys worth ... but should be useful infra for adding physics
Switched from jquery to cheerio

Have only tested with a simple requirejs configuration, but didnt experience any issues at all. Only tested on windows.
Occurrence Traverser

This allows to traverse for occurrences by giving it a start date e.g. http://plone/event/2012-04-12.

I've reused the event view for the occurrence. The icalendar view doesn't work (yet). I think I'll need to concentrate on the events portlet.
Issue 110 (1.0-beta.31.1.5) #for:do: should accept list

implementation complete ... tests and integrate with master branch for Issue #125
See the shiny!

Dude, you should check out the color scheme I added! It's pretty. Right now you just comment out whichever section you don't want to use.

By the way, I made an ant buildfile (it's the one called build.xml). If you're doing stuff from the command line (like if you decide to work on Ubuntu), it will serve basically the same function as an IDE run button.

First, make sure you have ant installed (Linux/Mac/Winders). Then, all you have to do is go into ParticleHero where the build.xml file is and type 'ant run'. It'll compile and run the program for you!

There are some extra goodies too (you can make ant do a lot of things), but that's all that's important for now!
Refectored search carsousel

This PR rewrites large parts of the carousel, the basic areas are:

* Refactoring of the layout style in relation to the design decisions made in the Ding2tal design group.
* Updating the rs_carousel script and the side effects of this update (https://github.com/richardscarrott/jquery-ui-carousel).
* Updated default styling to be based on SASS.
* Refactoring of the modules cache logic (previously interrupted cron runs).
* Optimizing usage of the data well and moreinfo cover service.

A lighthouse ticket can be found [here](https://libraryding.lighthouseapp.com/projects/81497-ding2/tickets/12-refaktorering-af-ting_search_carousel)
* Minimization of the number of request AJAX callbacks.
Added current location full screen map (on iOS)
Support combinations of include_database and exclude_database when include_database uses mysqlhotcopy table regex.

...clude_database parameter into database name and optional table regex parts.

- This means keys for %dbs are always database names and fixes an issue where a combination of exclude_database and include_database lines would backup the same database twice, i.e.:
    exclude_database someotherdatabase_causing_all_discoverable_databases_to_be_included
    include_database specific_database./~table_regex/

    With the config above, "specific_database" would have been copied entirely, and with again with restricted tables.
  - %dbs hash values are undef when dump_type is "mysqldump", or when there is no table regex. Otherwise, they are the regex part of the mysqlhotcopy database parameter.
  - Updated documentation and examples.
Removed duplicate ")" suffix. Added calculation for prefix and suffix to actual max length.

Hi,

Not sure if you already have these changes in a branch, but I fixed these couple of issues on master.

Thanks for your plug-in!
Fix gh-2503 Truncated Archive when download

When a large workunit archive is downloaded through
WsWorkunits, it is truncated to 640k. This fix removes
the 640k limit for the file download.

Signed-off-by: Kevin Wang <kevin.wang@lexisnexis.com>
HPCC-8124 Check for failed malloc

Specifying a large value for DATA[n], STRING[x], etc  such as DATA10000000000 causes ECLCC
to core. This fixes that problem by checking for a failed malloc and
throwing if it happens

Signed-off-by: William Whitehead <william.whitehead@lexisnexis.com>
HPCC-3314 Configmgr - Need finer granularity when copying Hardware

- Add 'Copy Hardware Item(s) To ->' context menu for Hardware Copy
- Allow multi-select for Hardware Items for copy

Signed-off-by: Gleb Aronsky <gleb.aronsky@lexisnexis.com>
Update src/play/cucumber/CucumberService.java

This patch is proposed as a workaround for the following problem :
 - in a default Cucumber RuntimeOptions, a ProgressFormatter is instanciated using the standard output (System.out)
 - when the test is ended, the progress formatter closes the stream

This causes all later traces to be lost (as the stream is closed)

The proposed workaround consists in removing the ProgressFormatter from the default formatters list.
bgcolor

DO IT NOW bitch <3
fix czech translation

change </b> where it should be <b>

see:
https://bugzilla.redhat.com/show_bug.cgi?id=886034
imenu support
Rework build scripts

Updated the build environment to use Premake 4 for portability. As a bonus, I also finished implementing the linked list. That is the only data-structure provided for now but more are on the way.
Fixture data sampling
progress on tidying up hardcoded urls

r?

daily.html and builds.html still need a lot more work to "templatify".
[NH-3238] Add Sql2008ClientDriver support in DatabaseSetup for testing

Add "NHibernate.Driver.Sql2008ClientDriver" support in "NHibernate.TestDatabaseSetup.DatabaseSetup" for testing against SQL Server 2008 or later.
Styled bid meeting, added gauge, added faces
Few tweaks to the english.

Fixed a few sentences that were not making sense a few other small mistakes.
31511223 plate information layers disapear
Fixed a typo in README

Fixed a typo in README, "network" was spelled "netowrk".
Mobile version should not load qrc url for 404 error

We no longer have support for loading qrc urls on WK2, so instead,
we dump the html into a constant and use QQuickWebView's loadHtml.

Reviewed-by: NOBODY
Switched to EF 4.3 

4.3 introduces migrations, which should be a nicer way of adding values than trying to drop all the time.
hi i want to commit my code

please pass
Added support for https and other tiny things...

Hi Olivier,


just added some tiny things to your recaptcha library.
- Support for https recaptcha
- Support for eclipsify command
- Updated documentation
- Added two tiny testcases to demo (one for https / one for https)

I also increased version number to 1.3.

Let me know if the stuff is okay, or if I should change anything - always good to learn new things :)

Would be great if you could release this version of recaptcha to the central playframework module repository when you've got some free time :)

We are looking forward using recaptcha over https :)


Thanks for the great module :)

Best,


Raphael
Xml parser

Made some modifications to `wax_xml.m`.  One is to handle properly CDATA tags, and the other for `wax.xml.parse()` to accept an optional error handler function as its last argument.  I explain more in the last two commits of this pull request, which are the ones I'd like you to actually merge in your master branch — if it's ok with you.