Implemented crude authentication mechanism for R API, since the 'add' API of Molgenis now requires authentication. Strangly, downloading of data ('find' API) seems to be always allowed. Updated and enhanced xQTL R API.

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9324 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
* Implemented and added heatmap plotting via R, including clustering options
* Changed printing of RScriptException to just the error and not the whole script (better for GUI display)
* Enhanced printing of R object to be able to replace NA with 0
* Removed/disabled old heatmap plugin from xQTL gui
* Added 'matrix example' when creating new Data object
* Aligned matrix column header left for better usability

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9329 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
* Implemented and added heatmap plotting via R, including clustering options
* Changed printing of RScriptException to just the error and not the whole script (better for GUI display)
* Enhanced printing of R object to be able to replace NA with 0
* Removed/disabled old heatmap plugin from xQTL gui
* Added 'matrix example' when creating new Data object
* Aligned matrix column header left for better usability

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9329 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
Bugfix: constants for xrefLabelNames are now also created for mref's.

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9333 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
Bugfix: constants for xrefLabelNames are now also created for mref's.

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9333 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
Implemented a number of csv-matrix-data preprocessing tools that should help avoid painstaking reformatting work.

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9337 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
Implemented a number of csv-matrix-data preprocessing tools that should help avoid painstaking reformatting work.

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9337 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
Small fix for Database creation for Controller.

super.getDatabase() 
doesn't work in anonymous classes

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9342 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
Small fix for Database creation for Controller.

super.getDatabase() 
doesn't work in anonymous classes

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9342 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
Added a helper method to rapidly get first parent form matching a particular Entity type using syntax: FormModel<MyEntity> f = getParentForm(MyEntity.class) 

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9352 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
Added a helper method to rapidly get first parent form matching a particular Entity type using syntax: FormModel<MyEntity> f = getParentForm(MyEntity.class) 

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9352 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
small simplification in getInfo

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9357 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
small simplification in getInfo

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9357 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
extra check for <include model tag to check if file exists.

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9358 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
extra check for <include model tag to check if file exists.

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9358 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
fixed casing in getFields to match fieldnames used otherwise in Database

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9359 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
fixed casing in getFields to match fieldnames used otherwise in Database

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9359 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
fix nullpointer exception for Mrefs without default value.

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9360 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
fix nullpointer exception for Mrefs without default value.

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9360 42de9c89-b41c-0410-9fa9-f33e7b6bda7a
render ActionInput without label in FlowLayout

git-svn-id: http://www.molgenis.org/svn/molgenis/trunk@9361 42de9c89-b41c-0410-9fa9-f33e7b6bda7a