labofsahil/github-event-dataset-2012 huggingface dataset:
Do not write compressed SPDY frames out-of-band in another thread

The fix in #448 for issue #442 introduces another, even more sinister bug.

Since uncompressed frames and compressed frames from a single originating thread are eventually written from different threads, there is a race condition between sending eg. a SpdySynReplyFrame and SpdyDataFrame, meaning frames can get re-ordered and written to a stream before it is "open", violating the SPDY spec.

(this actually happens with my production code)
Attempt to provide a proxy for gzip file

My hard drive is full but some of our codes/interfaces uses matlab/spm.
So I coded an FileProxy extension to Node that uncompress the .nii.gzip files before running the interfaces, then compress the output nii files to nii.gz (though only if the output_name is specified).
It maybe not the best design, I have been thinking after that Node instances could be added a list of file preprocessor/postprocessors object to handle certain types of files.
I push it not to be included but to discuss about solution to handle spm .nii.gz files problem and maybe other interfaces I/O that I am not aware of.
What do you think?
Fix unicode repr object

If you try to print an array with unicode in it and an object dtype, it currently fails. This happens often for me working with pandas because it defaults to the object dtype for non-numerical arrays. This is because the fallback for the formatting is str. Is there any reason not to use the numpystr function here that can handle unicode?

Reproduce

```python
import numpy as np
a = np.array([u"\xe9"], dtype=object)
print a
```
Fix 'dataType' typo in thumbnail_figure. See #9986

This is in dev_4_4 as https://github.com/ome/scripts/pull/14, now for develop...
Cleaned up script documentation for qiime_test_data.
Add file path/name to compile error messages
added backlight widget
Fix skip_[after|before]_filter to not skip an around-filter, ever

@xaviershay

Previously, if something like the following was executed, the `foo` around-filter would not be skipped (it's not a before-filter).

```
around_filter :foo
skip_before_filter :foo, :only => :index
```

But if the following was executed, the `foo` around-filter *would* be skipped. This patch fixes that inconsistency.


```
around_filter :foo
skip_before_filter :foo
```
Fix truncated line in the i18n edge guide

Used the text and URL at http://guides.rubyonrails.org/i18n.html
don't eagerload paths that have been flagged as eager_load => false

Hey @spastorino,

This has created a regression in how paths are eager loaded:

https://github.com/rails/rails/commit/53778ec2d716f860646fd43957fd53c8db4da2fe

However, I don't think there's anything wrong with this commit.... I'll explain more:

Before the above commit:

 ?> pp Rails.configuration.paths.eager_load
["/home/jsharpe/project/app/assets",
 "/home/jsharpe/project/app/controllers",
 "/home/jsharpe/project/app/helpers",
 "/home/jsharpe/project/app/models",
 "/home/jsharpe/project/app/modules",
 "/home/jsharpe/project/app/structs",
 "/home/jsharpe/project/app/workers"]


After the commit:

?> pp Rails.configuration.paths.eager_load
 ["/home/jsharpe/project/app/controllers",
  "/home/jsharpe/project/app/helpers",
  "/home/jsharpe/project/app/models",
  "/home/jsharpe/project/app/modules",
  "/home/jsharpe/project/app/structs",
  "/home/jsharpe/project/app/workers",
  "/home/jsharpe/project/app"]
  

Note that /assets is now missing from #eager_load - which was the intent of the patch.  However, /app is now included when it wasn't before.

I'm pretty sure that it was a bug before the commit that /app was missing.  It is set to be eager_load => true here:

https://github.com/rails/rails/blob/3-2-rel/railties/lib/rails/engine/configuration.rb#L42

Now that /app is (correctly) part of eager_load, it now automatically loads anything inside of /app - including things that are specifically intended not be loaded.

For example, if I do this in config/ application.rb:

config.paths.add('app/manifests', :eager_load => false)

then files located in app/manifests are loaded - and that I believe is a regression.  The attached patch fixes that.

I'm trying to set up the rails test suite up and running, but I wanted to at least start this conversation.

Thanks!
Change 'Hash' to 'hash'.

test_rollback_when_saving_a_frozen_record in transactions_test.rb failed.
The runtime error's message returned 'hash' instead of 'Hash.' This commit 
changes the test to reflect the message, which makes the test pass.
Added comment on how to enable gzip compression

Disabled by default but should be handy for people running rails without using any frontend proxy e.g Cedar stack on Heroku. Added in production environment on advice from @sikachu, as that's the place it going to be needed.
"Password digest can't be blank" message from has_secure_password

To avoid suicide when users see the message
"Password digest can't be blank" followed by message
"Password can't be blank"
Fix wrong doc and message about rails profiler.

According to edge rails, it seems that these doc and message are wrong.
Schema dump database url first

Fix `db:schema:load` + `:dump`: look first in DATABASE_URL, then database.yml.


Currently when I run `heroku run rake db:migrate` on Heroku with the official
Rails 3.2.6 I get:

    ...
    <migrations>
    ...
    database configuration does not specify adapter

... and then rake fails.

My findings:

This last line is printed by `db:schema:dump` called from within `db:migrate`.

`db:migrate` "itself" (`ActiveRecord::Migrator.migrate`) uses
`with_connection`, which succeeds, while `db:schema:dump` uses
`ActiveRecord::Base.establish_connect(Rails.env)` followed by
`ActiveRecord::Base.connection`, which fails.

The latter call unconditionally looks in config/database.yml for the database
settings, whereas the former uses whatever settings were initialized by Rails.

When Rails is initializing, `Railties::ActiveRecord` calls
ActiveRecord::Base.establish_connection without parameters.


Removing the `Rails.env` argument allows `establish_connect` to probe for the
correct settings itself, and then it picks `DATABASE_URL` first, regardless of
`RAILS_ENV` or `RACK_ENV`. This seems to me the more proper behaviour.


If I set `RAILS_ENV=production`, not only `RACK_ENV=production`, for some reason
that works. Possibly heroku's database.yml contains a `#{RAILS_ENV}:` line or
something along those lines, I haven't checked. Either way, it doesn't affect
the above reasoning for the proper behaviour of `db:schema:dump`.

This pull request also contains the equivalent fix for `db:schema:load`.
Update Active Record CHANGELOG for #7419
Had incorrect paths for node attributes
Add missing clean/2

Patch for https://github.com/rebar/rebar/issues/23
SI-5683 Fail gracefully when transposing a ragged type arg matrix.

The code used to do this, until `transpose` starting throwing IAE
rather than AIOOBE.

Symptomatic treatment only: The reported crasher now infers ill-kinded
type args and reports an error.

review by @adriaanm (who applied the band-aid that fell off 68aeeae)
Fix SI-5929 - Verify error with finally and pattern match

Don't enter all labels in a method when emitting a forward jump, since some
labels will be duplicated (if defined inside finally blocks). For each forward
jump, enter only the label that is needed for that jump.
deals with magic

review by @paulp @retronym
SI-6359 Deep prohibition of templates in value class

This seems to have been the intent of 95d532 / SI-5882.

The method local object/classes are also generated with `outer` pointers, so we should also prohibit them, at least for now.

Review by @paulp or @odersky
BUG: Fix API types for minpack.

Pull request for: http://projects.scipy.org/scipy/ticket/1700

Patch by Yaroslav Halchenko.

Fixed API type mismatches for minpack on s390.
MAINT: sparse: eye() instead of identity()

sparse.identity() and sparse.eye() are almost the same thing. Confusingly, you cannot call eye() with a single parameter to get a square matrix.

This PR makes eye() accept a single parameter, and implements identity() via it. Also, makes it return dia_matrix by default.

I'm not 100% sure about the depracation. I suppose `identity()` is used by absolutely everyone --- if this causes warnings to pop up, it'll be a nuisance.

http://projects.scipy.org/scipy/ticket/1767
product - variant image migration may throw erros and thus leave db in uncontrolled state

I luckily had my production data on the development machine when this happened. What a nightmare if it happens in production.

I don't know how or why, but there was a nil (image['viewable_id'] )  which occurred in the loop and the db threw and error and the migrations aborted.
As this is a most undesirable state of affairs I put a silent catch around the offender, so the loop continues.
Fix spelling in #calculator_available?

This fixes the spelling of calculator in #calculator_available in
Spree::ShippingMethod
More whitelisted attributes for mass-assignment

spree-1.0-stable:

Adds more attributes to mass-assignment whitelist for adjustments.

The current whitelisted attributes in adjustment.rb are not enough.
https://github.com/spree/spree/commit/b9669fa56bee15a253cbab56528112bad9505534#commitcomment-1560552

When creating adjustments with source and originator, the related attributes will be ignored.
This breaks many things like the calculation for taxes and shipments.

Also when adding a new TaxRate, a calculator must be chosen.
The calculator_type attribute is sent via the form and needs to be whitelisted.

Thanks
Changes to Spectrum object for x-ray spectrum

Added an example.py file which loads a text file with an example x-ray spectrum from RHESSI.
CSE vs Tuples

Hi all,

here's the pull request as discussed with @asmeurer.

Andreas
Fixed out of bounds in quicksort routine

Hi,

this patch fixes an out of bound exception in SortTools_QuickSort.gxx code.
I did also some cleanup of formatting and code style... I don't know if it's right or not

CIao

Max
don't alert user on worker restarts caused by hitting max requests

When worker restarts due to hitting request limit uWSGI generates warning that might be confusing to users since it looks like something bad has happened while everything is under control:

```
Nov  7 22:01:42 localhost app: ...The work of process 99 is done. Seeya!
Nov  7 22:01:43 localhost app: DAMN ! worker 1 (pid: 99) MISTERIOUSLY died :( trying respawn ...
Nov  7 22:01:43 localhost app: Respawned uWSGI worker 1 (new pid: 111)
```

With this patch uWSGI handles such condition and doesn't show any warning:

```
Nov  7 22:03:26 localhost app: ...The work of process 99 is done. Seeya!
Nov  7 22:03:27 localhost app: Respawned uWSGI worker 1 (new pid: 111)
```
Issue #1726

Issue #1726

Undefined variable: json

yii-1.1.12.b600af/framework/web/helpers/CJSON.php(332)

324     public static function decode($str, $useArray=true)
325     {
326         if(function_exists('json_decode'))
327             $json = json_decode($str,$useArray);
328 
329         // based on investigation, native fails sometimes returning null.
330         // see: http://gggeek.altervista.org/sw/article_20070425.html
331         // As of PHP 5.3.6 it still fails on some valid JSON strings
332         if(!is_null($json))
333             return $json;
Use multiple translators when generating translations

see https://github.com/yiisoft/yii/issues/1228
Using SynatMetadataTransformers; merging

Using SynatMetadataTransformers with Dublin Core support.
Merging and resolving conflicts.
A better readme file

This is the first good README file!
Revamp Build System for Boost

This change encodes the Boost library location into the active run-path of `libopmcore.so.0.0.0` such that Boost is automatically conveyed on to clients of the OPM-Core library.  This removes some of the inconvenience associated to using OPM-Core in other projects.

The change also splits the `libopmcore.la` link statement in such a way that all libraries are put at the end of the link line rather than the beginning.  While the outcome is typically unchanged in the case of GNU's linker, this is the more portable definition.
Update gemfile to use platform => jruby and run bundler

@obrie @betamatt @tannerburson
Posts tagsのアソシエーション設定
Remove useless table for annotation type [fix #26]

The table was not getting reassigned, this made annotation values
get confused.  One option was to properly use `exit()` on these tables,
but they weren't being used at all.  Therefore, remove them!
Compression for query plans
fix error when using mixed tokens.
Redmine Plugin

Adds redmine plugin and fixes repo ignore file.
Issue183

This avoids hanging the bnd runtest process.
Fixing pagination examples using 'dir' and not 'direction'

As seen in the whitelist, the key is "direction" and not "dir":
https://github.com/cakephp/cakephp/blob/master/lib/Cake/Controller/Component/PaginatorComponent.php#L86
Develop

CSRF protection
Removed jewler and guerrilla_patch dependencies

removed both these dependencies.

left out the version bump since that included a name change for the gem.
Function builder cleanup and refactoring
Spork: refacored to use the POConverter pattern and changed package structure

Ferry pull request FTW.
pluralize a little smarter
Make Em.RestAdapter begin a run loop before invoking callbacks after ajax
Buffered changes from old pull requests

- Adapted `make {start,debug}` to new workflow
- Better security options handling	 (from old pull request)
- Do not overwrite logs
- Sorted mime types alphabetically by category
- Corrected some mime types
- Added a few more mime types
Updating Roles

* IFRC Users have roles for All Entities
Inv Fixes & Integrated latest Vulnerability HTML/JS/CSS

* Fixing org_facility rheader
* Fixing bugs from separation of inv_warehouse
* Fixing bug on HRM create
* Project Beneficiary Report Fixed
* Fix link to Job Title Popup (from Warehouse)
* Disable inv/track_item/create
* Restore Req Skill controller
* Integrated latest Vulnerability HTML/JS/CSS
CONTRIBUTING: documentation on how to contribute

Signed-off-by: Anthony G. Basile <blueness@gentoo.org>
Development fixes for 1.14 (version is 1.13.3-SNAPSHOT)

Fixed #512 Update example data
Fixed nullpointers. Story #443 and story #515
Fixed #529 Cannot see the baseline in the BR-overview tab
Add modifications developed by David Chen to CMakeLists.txt and

buildForIntelCompiler to enable building for the Intel compiler under
the modules system.
Docstring fixes

Docstring-fixes redux, at the request of Raynes.

Regards,
Kevin
DO IT

Yep
Including <uv.h> shouldn't emit any warnings

I'm trying to add a plugin that use libuv to my library and I'm normally compiling my modules with:

 gcc -DHAVE_CONFIG_H -I. -I./src -pipe -I./include -DHAVE_VISIBILITY=1 -fvisibility=hidden -Wall -pedantic -Wundef -Wshadow -fdiagnostics-show-option -Wformat -fno-strict-aliasing -Wno-strict-aliasing -Wextra -Werror -fprofile-arcs -ftest-coverage -pipe -std=gnu99 -Wstrict-prototypes -Wmissing-prototypes -Wredundant-decls -Wmissing-declarations -Wcast-align 

The constructs:

#if variable

will emit a warning if it's not defined, causing my build to break. The attached patch change these to #ifdef (this means that defining them to "0" instead of undef'ing them no longer works.. The alternative would be to extend the code check if they're defined _AND_ set to something else than 0...
More colorized output options

It adds an option to the Logger for display more meaningful colorized output (warn and error message).
Currently it only adds warn color on unreacheable servers.
Hope it helps to get better error visualizations when managing tasks with a lot of servers.
FIX Float tables outside their container

Float tables in productivity_report are outside their container
Avoid connection refused errors from polluting the logs

Since it is quite likely that remote participants are not reachable via the network, we should account for this case in a less verbose fashion.
reformatting, and stuff. added jade to package.json
Schema option callback="(class::)method" added to xPDOObject::set()

Modified xPDOObject::set() to read map for generated="callback" and callback="(class::)method". And check if callable and sets for call to call_user_func_array

<object generated="callback" callback="MyClass::StaticMethod" />
and
<object generated="callback" callback="myFunc" /> Both work. 


Have not added tests to unit testing
here are small modifications

!i have not test it because I have no mac but it is mainly change constant to static readonly and throw argumentNullException when needed
ALLOWED_TAGS + figcaption
Fix deriving for single-variant enums

r? @pcwalton
Valgrind check disable, Trait "UniqueStr" rename, 

2aa1870 : This disables valgrind tests and argument I think
Ignore empty fields, replace forEach and breakLoop
Development updates for 1.0.5

- better CLI arguments
- help screen
- default path fix
[ticket/10184] Disable receiving pms for bots by default

http://tracker.phpbb.com/browse/PHPBB3-10184
[ticket/10650] Last post subject in forum list.

This patch displays the last post subject in the forum list with a link to the last post. A global toggle in the ACP is provided to toggle the feature on/off. It takes into consideration passworded forums and read permissions of user. Empty subject lines are not displayed.
WIP: [feature/userdelete] Allow users to delete their own accounts

Currently needs testing, but I think most of the logic and functionality is done.

http://tracker.phpbb.com/browse/PHPBB3-9621
[Ticket/10691] Fixed the speed of creating search index

$time is now initialized after each batch iteration.
Speed for each batch iteration of creating search index is fixed.

PHPBB3-10691
remove check path
Drive audit

Rebased
apple + alphabet order
Suggested fix for code that uses timer functions with varargs

Garry removed support for varargs in timer functions, suggesting this as a fix
[LINUX] Headers for ioctl

Linux headers in order to compile properly. Otherwise line 658 will raise 2 errors
[droid] touch input refactor

These commits refactor the whole touch input handling currently done in CAndroidTouch based on events from the NDK and the native activity.

The general idea is to have a generic (i.e. not Android/platform specific) touch input handler/manager (CTouchInput) which contains all the logic to handle touch events (touch down/up/move) for multiple simultaneous touches (currently a maximum of 2 touches are supported). Whenever there is a touch event it is passed to CTouchInput through its Handle() method which triggers the logic to handle the new touch and deduce some action from it. Depending on the current and previous touch events CTouchInput calls callback methods. These callback methods are sent to a platform specific implementation derived from ITouchHandler which has been previously registered with CTouchInput. In these callback methods the platform specific implementation (in case of android this is CAndroidTouch) can send actions to XBMC (or ignore the event).

There are "low level" and "high level" callbacks in ITouchHandler. Currently available high level callbacks are OnSingleTap, OnSingleLongPress, OnDoubleTap, OnDoubleLongPress and OnZoomPinch. Low level callbacks are basically single/multi touch down, up, hold, move and events for pan start, move and end (although the pan related callbacks could be considered "high level" as well).

The behaviour of touch input has not changed apart from some fixes I have added to improve multi touch and especially double tap recoginition. In addition to the existing behaviour there is now also touch hold detection (for both single and multi touch) using a (very simple) timer class. The timeout for hold detection is configurable and defaults to 1 second (Android's default). I used the single touch hold (OnSingleLongPress) to trigger the right-click action (to bring up the context menu) which is currently done using double tap. IMO that's much easier to use and much more intuitive because that's how most Android browsers and editors work.

Obviously there's only one implementation of ITouchHandler so far (because iOS has its own touch handling logic provided by the iOS SDK). CAndroidTouch is now very simple and clean and easy to extend/adjust without having to work through the whole touch detection logic.
Fixed broken links, cleaned up formatting.

Just did some cleanup work for the Mustache to Handlebars conversion.
fix two newsboxes unit tests, misc

fix unit tests, lint, style change
Merge dmitris pr #542

thank you @dmitris
add postgres-server-dev dependency which is needed by the pip install

 (psycopg2==2.4.1)
Delete INSTALL.md as it is redundant with README.md
[ADD] TestCase for seconds-from-duration function
Update master

Petite erreur de saisie
Added maven source and javadoc plugins.

This would be really great to have available as it allows some IDEs to download the sources/javadocs very easily.  It's probably useful in ways I'm not aware of as well.
some updates

- modified GOM_Ship::move() to use action flags for calling accelerate(), decelerate(), and rotate() functions
- implemented "keyReleaseEvent(QKeyEvent *event)" in gamewindow class for testing action flags (compile "/DC2012/src/player/testing/DC2012v1.2(ship movement demo).zip" to see demo)
minor changes..

- added size definitions for cannon ball
- modified GameObject constructor for PROJECTILE ObjectType
[DS-1130] Controlled vocabulary support for the XMLUI

A port of the controlled vocabulary functionality during submission from JSPUI to XMLUI.
Fix stream output operator for Vec<uchar,n>

This fixes output for 8U and 8S vector depths.
They were mistakenly printed as characters instead of numbers.
Search PATH for executable path when not on Windows

When running on OS other than Windows, `srlua` attempts to open `argv[0]` as the executable. When called from `PATH`, this file is not accessible and `srlua` fails to execute the file. This patch implements the `PATH` search to find the executable path on which `fopen` succeeds.
small changes for overall code works

including helper class, removing old classes, and fixing small inconsistencies
Favicons

#6872860 Fixes a 404 error due to non existent favicon.
#4ab0c15 Uses DateTime instead GregorianToJD to calculate with days.

This is also my first-ever pull request.
Tradotto dal Jap.
Tradotto perfettamente in italiano =)
Tradotte alcune parti
agg. trad. eng
OpenPGP support

Hello,
Here is my work to implement support for key generation, key & certificate import, email decrypting for OpenPGP card.

To check if it works, see example usage here: https://docs.google.com/a/mbm.vn/document/d/1qjiFJGCTWOhzYgMbJMZ79gDxiDXrY4xtNfRD1siXtcg/edit?pli=1
Faster BNode, Python 2.4 and Windows compatibility

Please accept a bunch of fixes for the following issues:
 - BNode serial number generator's performance on Windows Python 2.4 was unusable (test_issue209 alone took minutes to complete); code for Python 2.4 number generator reseeded random each time it was called and used seed(str) instead of str(int); removing a threading.Lock also helped with Python 2.5+
 - pure Python defaultdict implementation (copied from an ActiveState recipe) for Python 2.4
 - some code in date parser that didn't do anything and broke Windows tests was removed
 - some minor fixes to tests to make them Python 2.4-compatible
 - swap_n3 tests now work both on Windows and Linux

To summarize:
 - BNode serial generation is faster
 - tests now work on both Python 2.4 and Python 2.5+, Windows and Linux (well, 1 error in test_roundtrip is still there, but it's not an OS/Python version compatibility issue)
RAXAJSS-111 Create PatientListService for CRUD and Helper methods to PatientListDAO

-added in service layer for PatientList
-added @Authorized annotations for new privileges
-added unit tests for each service function
Faster monotonic check

For a simple `iris.load_raw()` which loads 840 fields at 411x412 resolution, the execution time drops from 8.5s to 3.4s. :balloon:
This fix a new test for a new feature.

If travis would have run the tests, it would have detected it, but it didn't ran...
ENG-2906 - Debian installers

New script performs installation and creates debian package.
Modify the README to include a way less fragile start command.
CMDB API resources

#### Adding a new resource:
* CILayers, CITypes

#### Adding ability to filter the resource CI

###### Availability methods:
* startswith:
    * fields: (name, barcode)
* exact:
    * fields:  (name, barcode, bussiness_owners, layers, pci_scope, type, technical_owners)

###### Example usage:
* startswith:
    * ` http://localhost:/api/v0.9/ci/?field_name__startswith=phrase&username=your_username&api_key=your_api_key&format=json `
* exact:
    * ` http://localhost:/api/v0.9/ci/?field_name=phrase&username=your_username&api_key=your_api_key&format=json `
Add lcov support

This contains few changes to testsuite (regarding how the redis is ended, because for coverage/profiling there's need to exit cleanly). LCOV report can be generated by simply "make lcov", source is then cleaned, builded with coverage support, test suite is run in single-client mode and lcov report is generated and saved to src/lcov-html directory.

This report is standalone set of static html files, it would be nice to have them as part of redis CI :-)
CHANGED: Added newlines, again

I missed some missing newlines. Now there shouldn't be any missing newlines in "arcemu-world/Master.cpp" and "arcemu-logonserver/Main.cpp" anymore.
Rev jobs

review about jobs page. @timwata
Add link walking and search tests

/cc @seancribbs would you mind?
Rename

Remy is already used and we're going to make this a knife plugin soon anyway.

I'm thinking the command should be:

knife deps fetch
or
knife deps resolve

I also considered:

knife dependencies fetch

but dependencies is a long word.

Thoughts?
Append CFLAGS/LDFLAGS to any flags already set, so custom builds with no...

...n-standard include paths can work.
Signed Contributor Agreement
This adds a command line option to make cfengine compatible with launchd...

Launchd on OSX requires that daemons do not fork, in order to work as a watchdog service. This small patch adds a command line option to run cf-execd in foreground mode for compatibility.

For reference, se "Behavior for Processes Managed by launchd" in https://developer.apple.com/library/mac/#documentation/MacOSX/Conceptual/BPSystemStartup/Chapters/CreatingLaunchdJobs.html#//apple_ref/doc/uid/10000172i-SW7-BCIEDDBJ
Server validation and log out functionallity
Porting to GTK+3

Hi,

I've been working to port DeVeDe to GTK+3, although the current state is still WIP I'd like to know what you think.

Thanks for considering.
fixed chopTree
Issue 1383 cmsmaintenance assets search and replace

the assets search and replace functionality is now included in the cms maintenance, under the tool tab.

Files updated

/src/com/dotmarketing/portlets/cmsmaintenance/ajax/AssetsSearchAndReplaceAjax.java
/dotCMS/html/portlet/ext/cmsmaintenance/view_cms_maintenance.jsp
/dotCMS/WEB-INF/messages/Language.properties
/src-conf/dotmaketing-config.properties
Issue 1518 edits template template
Moved Achecker classes from eng to dotcms pachage #13

I moved achecker package to src/com/dotcms subpackage and tested the result.

About documentation to add please be more clear.

This package is the porting of achecker software: http://achecker.ca/checker/index.php
This software has a database of checks (expression to be verified against nodes of a parsed DOM document) that is imported on startup from dotsecure/achecker/achecker.sql.
We simply ported in java the core engine of AChecker:
- from selected GUIDELINES select CHECKs to verify
- parse HTML document or fragment and produce DOM
- iteratively verify expression of check over the related DOM node.
- create a list of results (metadata of check not verified, row, column in document, severity of error)

We integrated this mechanism in TinyMCE by mean of DWR wrapper and tinymce plugin called "validation".
fixes #1510
Remove the last warning from gcc 4.6.1

With the patch, kmscon compile now without warnings.


Signed-off-by: Detlef Riekenberg <wine.dev@web.de>
Decouple NRML/XML export for hazard curves from calculation

Please see also: https://bugs.launchpad.net/openquake/+bug/1011561

Please note: this branch was already reviewed by Lars and merged to the master branch.
add extra argument to beforeencodelegend in PrintProvider (non-functiona...

...l change)
Fix rendering links in restructured text tables bug

Fix for restructured text links in tables bug #42
Alternative to #338
Fix data frame indexing in example 3.17.
Added roles to ubiquo_user form and fixed role form view
Adding additional Findbugs attributes

Adding: include, exclude, visitors, omitVisitors, effort, reportLevel
pritns removed
remove ps:dynos and ps:workers from help on the way to deprecation
Add detail on the pgbackups:capture expire option help

It destroys the oldest *manual* backup to make room
simplify before/after blocks

There were multiple `before`/`after` blocks and resulted in `~/.netrc` getting deleted. I consolidated the blocks into one `before` and one `after` block.
stringify all the config var values, handle booleans.

The Heroku API can return a boolean for a config var, like this:

{"COMMIT_HASH"=>true}

This will cause the client to blow up. This sets the value to true or
false depending on the boolean, so client doesn't blow up.

This will handle both the nil/boolean case as well as stringifying all the values.
Fuel mass

Correct acceleration calculation must be added to this branch too..
Fixed:Multiple booth daemons error

I fixed multiple booth of error message. 

Currently, the following error message is output when multiple booth started.

ERROR: failed to bind socket Address already in use
or
ERROR: bind error -1: Address already in use (98)

So  I check the lock of  pid file before socket is opened.
Fixes #12550
[1.9] Fix #12411 removeClass() doesn't remove as expected

An empty function call is not the same, as calling a function with an undefined variable.
If we check against !arguments.length instead of undefined, we can tell apart these situations.

OLD:
.removeClass()
removes all classes, as expected

.removeClass(undefined)
also removes all classes, which is wrong in my eyes

NEW:
.removeClass(undefined)
removes nothing, like null, false and "" do

Bugreport:
http://bugs.jquery.com/ticket/12411

EDIT:
jsFiddle: http://jsfiddle.net/jaggli/npkgS/

PS: I noticed this while calling element.removeClass(someObject.someVar); 
where the object was defined, but someVar was undefined, so this is a pretty common situation, I think.
Enforce expects in event.js (https://github.com/jquery/2012-dev-summit/issues/53)
fixes #11857, modularizes CSS

No source changes, just tests again.

```
grunt build:*:-css && grunt min && grunt compare_size
Running "build:dist/jquery.js:-css" (build) task
Excluding css: 'src/css.js'.
Excluding effects: 'src/effects.js'.
Excluding offset: 'src/offset.js'.
Excluding dimensions: 'src/dimensions.js'.
File 'dist/jquery.js' created.

Done, without errors.
Running "min:dist/jquery.min.js" (min) task
File "dist/jquery.min.js" created.
Uncompressed size: 210615 bytes.
Compressed size: 27570 bytes gzipped (76698 bytes minified).

Done, without errors.
Running "compare_size:files" (compare_size) task
Sizes - compared to master
    210615    (-40761)  dist/jquery.js                                         
     76698    (-15325)  dist/jquery.min.js                                     
     27570     (-5602)  dist/jquery.min.js.gz      
```

Notes:
- built a dependency manager into `grunt build`, 
- removed css dependencies from tests that could easily use native `.style` instead of `jQuery.css`
Fix bug ZK-1480 and fine tune comment

http://tracker.zkoss.org/browse/ZK-1480
Comment feature

## Go with plan B

Built from scratch rather picking up a gem.

well I was actually planning to try some gems to implement the comment feature, such as [acts_as_commentable_with_threading](https://github.com/elight/acts_as_commentable_with_threading) or [acts_as_commentable](https://rubygems.org/gems/acts_as_commentable), A whole list is [here](https://www.ruby-toolbox.com/search?utf8=%E2%9C%93&q=comment).

But after I tried `acts_as_commentable_with_threading` I really don't like it. There are too many trailing spaces in the source code,, and the generated model code is ..ahh, I'd rather make it from scrach.
Allow Lockerz to use /d/ style photos as well

Like http://lockerz.com/d/14865509
Fixes in probability module

**Contains the following changes:**

Wilcoxon-Signed-Rank test: Changes semantics for precision argument, Documentation update

Jira: MADLIB-405, MADLIB-534, MADLIB-553

Probability functions:
- Hollander/Wolfe ("Nonparametric statistical methods", 2nd ed., p. 38, 1999) confirm the formula that we have been using. The warning about conflicting source has been deleted. (MADLIB-405)
- No longer treat NULL as special value for precision argument (MADLIB-534)
- Negative precision will now result in using the default precision, non-finite precision will be rejected (MADLIB-553)

SQL2C++ converter:
- Support for unary expressions (needed for negative default arguments)


Probability functions (Extreme-value/Exponential): Fixed handling of non-finite parameters

Jira: MADLIB-555, MADLIB-556

These are boost "bugs". Implemented fixes for the cases where boost does not catch non-finite parameters.


Probability functions: Documentation update

Jira: MADLIB-546

Fixes:
- Noncentrality parameter for Chi-squared may also be 0



Kolmogorov-Smirnov test: Fixed wrong calculation of test statistic

Jira: MADLIB-554

Fixed the following issue:
Whenever, we saw a new row, we computed the distance of the empirical distribution functions at the current position as

    double diff = std::fabs(state.num(0) / state.expectedNum(0)
                    - state.num(1) / state.expectedNum(1));

This could give wrong results in case of ties. After all, we increased state.num(0) and state.num(1) one after the other, so diff could temporarily be larger than it would be at the end of a group of ties.



One-way ANOVA: return NULL for p-values if d.f. <= 0 instead of raising error

Jira: MADLIB-552
Naive Bayes: Rectify type cast errors


Jira: MADLIB-738
    
Commit d7cd128 introduced type casts errors triggering a failure in
install-checks. This fix takes care of the type cast error.
Also, GPDPB 4.0 does not support array_agg. Hence we use m4 macros to
detect the platform and use the array_agg defined in array_ops
if necessary.

Other changes:
    Removed trailing whitespace
don't remove phony targets

On Windows it reports an error.
Fix queries being sent to RECOVERING nodes within a replica set

This pull requests fixes the issue I described in my last comment at:

  https://github.com/mongoid/moped/issues/115

It marks the node as down if it's neither a primary or secondary node, a condition which occurs when a node within a replica set is in the RECOVERING state.

FWIW, I don't know if this is the best solution but it works for me.
Develop3d - Fix Android touch disabled when SupportedOrientations changed after game started

Main issue being fixed: https://github.com/mono/MonoGame/issues/685
Also some discussion was had about the issue in this related thread: http://monogame.codeplex.com/discussions/390731

As a side effect of this change, MonoGame is only internally calling ApplyChanges() once at startup (unless orientation is changed).

Note that there are still some screen scaling issues, particularly when not in fullscreen mode. Fixing this is much more involved so should be left as a different task.
bugfix for psssound

otherwise pssuite is crashing
Small Win8 Fixes

Just a few fixes to help SlyGamer and anyone else along.

More coming tomorrow!
Added basic HalfVector2.cs, fixed Android build errors.

* I have added very basic HalfVector2.cs implementation based on XNA implementation.
* Also added HalfVector2 support to GraphicsExtensions.cs:OpenGLVertexAttribPointerType().
* Fixed android project build errors.
Add folder structure to contrib MPQ download script

Small change to cause MPQ download script to create the base folder and place patches within.
Noobs like myself will hopefully avoid this error:

[Trace] [MPQPatchChain]: Applying file: CoreData.mpq.
[Trace] [MPQPatchChain]: All files successfully applied.
[Error] [MPQPatchChain]: Required patch-chain version 9359 is not satified (found version: 0).
mpd: Allow bad 'search' requests

This causes an unrelated test failure that I can't manage to figure out. I need an additional set of eye balls on this.
Fixing a few typos in examples/docs

That's all.
Added 2 new API calls - CMD_PAUSE and CMD_PLAY
isc-dhcp 4.2.3-P2

Upgrade isc-dhcp to version 4.2.3-P2.
Tested on Lion with clang and llvm from XCode-4.3.3.
Adding Virtual Origanisation Membership Service tools

The VOMS tools are used academic grid computing environments and are a part of the Grid logon sequence for users.
lua: Using our LDFLAGS

This is needed for Xcode-only installations, since the LDFLAGS matter.
New Formular: vifm-0.7.2

Vifm is a ncurses based file manager with vi like keybindings.
If you use vi, vifm gives you complete keyboard control over your files without having to learn a new set of commands.
glib: use the official patch for gsocket.c instead

- Remove the third patch added today. The bug report is resolved.
- Add the official fix for that bug in `gio/gsocket.c`.

The devs got back in contact and reported that they had reverted
the offending change to `gsocket.c` and gave us the right patch
to do that.  Noted in the comments to remove at the next version.
Updated Drush formula to version 5.1.
phoronix-test-suite 3.8.0

Upgrade phoronix-test-suite to version 3.8.0.
Change patch to support the changes within `install.sh`
* Put metafiles in prefix
* Add `.bash` to the bash-completion script name
* Change the XDG MIME Openbenchmarking conditional from `DESTDIR`
to `INSTALL_PREFIX` so that all the files it uses get copied into
the Cellar, because Macs don't run `xdg-utils`.  This makes that
conditional behave as if Phoronix is being installed into a chroot.
* Remove the `-e` from echo so that it doesn't get echoed.
Subversion: update to 1.7.5 and add patch for UTF-8-MAC problem.

Subversion update to 1.7.5.

Then I add patch for UTF-8-MAC problem.

see detail:
http://subversion.tigris.org/issues/show_bug.cgi?id=2464
curl: Metalink support via --with-libmetalink

curl: add libmetalink option to enable Metalink support via --with-libmetalink
Update Library/Homebrew/cmd/home.rb

This patch let `brew home` command to use the BROWSER variable defined in your shell, so we can use web browsers like lynx and w3m to browse the homepage of a formula in our terminal. If the BROWSER variable is not defined, the `brew home` will behave like before.
Added lbdb 0.38.1

I forked ldbd a while ago and modded (without much knowledge) the files
to get it to build on 10.7 with Xcode 4.  I tried to get the changes
incorporated into the upstream, but have never gotten a response.
cairo 1.12.2 & remove fails_with :llvm

Upgrade cairo to 1.12.2 using the `.xz` tarball.  It saves 20MB.
Add the build time dep on `xz`.
Remove the `fails_with :llvm` build 2336.
Modify the `--enable-xcb` command to fit the new configure args.

Saving 20 MiB of download is worth the new dep on xz.
Cario builds without error using clang, llvm, and gcc from both
XCode-4.3.2 and XCode-4.0.2.  This was tested by building pango
and running `brew test pango` that was designed to exercise cairo.
Also their configure command has the xcb flag set to auto.  So
this commit adjusts the args so that xcb is off for Leopard and
on for everyone else like the previous formula.
weechat 0.3.8

Upgrade weechat to version 0.3.8.
Remove the patch block because the patch is included.
Compiles with clang and llvm-gcc on Lion.
uudeview: Fixes compiler warnings when -wreturn-type is on e.g.

inews.c:195:4: error: non-void function 'append_signature' should return
a value [-Wreturn-type]

This prevented me install uudewview with clang.

pre-patch error files

brew install -v uudeview https://gist.github.com/2768813
brew --config https://gist.github.com/2768816
brew doctor https://gist.github.com/2768816

config.log https://gist.github.com/2768820
Quick initial fix

the elimination of redundant draws also maps exactly onto the gst branch.
fixed missing include in lpcplex.hxx

"#include "opengm/operations/maximizer.hxx" was missing in lpcplex.hxx leading to a compilation error:
error: 'Maximizer' is not a member of 'opengm'
** DO NOT MERGE ** Command refactor

* added new context argument which can gather context from a callback
* all new argument filling and validation algorithm which takes into account context args
* move argument filling out of command.rb and into commands/base.rb
* args are now processed after we instantiate the command, by the command itself
* added an old_namespace contextual argument to 'domain update' to demonstrate how to use contextual arguments
  * In a few lines of code change 'domain update' is now ready to handle multiple domains without breaking backwards compatibility with single domains (old_namespace argument is optional)
fixes #215, Update apps/files/templates/part.list.php 

Cut filenames after 100 chars and add "…" to indicate that the name was cut off.
Also add a title to the "nametext" span element, so you can see the full name on hover.
fixes #215
set focus on search input if a user presses ctrl/cmd + f

Set the focus on the search input (#searchbox) if a user presses ctrl / cmd + f

Please review
@DeepDiver1975 
@karlitschek
FIRST

Probando...
877488 - Removing publish schedules section
Update pandas/core/format.py

Fixes #2576.
BUG: fix unicode handling in plot label, close #2080
Forked rendition for getViewportScrollPosition

No Quirks mode allowed.
Documentation copy edit about .git-ftp-ignore

Since .gitignore uses globbing, I assumed .git-ftp-ignore would do the same, and lost a couple of hours trying to figure out why no files were being uploaded.

Cheers!
Claim #D72F47 please :)

Thanks for Syte!
Document actions.py
Add camera_info_manager_py unary stack.

This is a Python implementation, similar to the C++ camera_info_manager interface.
Refactored tests to use VCR
Don't require injectable supertypes in dagger-compiler
Drop restrictions on PropertyMap keys; move checks into format-specific implementations

Hi,

I have created a patch to delegate the validity check for tag keys from PropertyMap to the implementing format, which IMHO leads to a more concise API (only one source of errors, no more problems with PropertyMap::operator[] -- see commit message for some explanation).
Do you agree?

Michael
Finalize HTTP Proxy Integration

I've finalized the HTTP proxy integration I began in #9's embarrassing late night pull request. I've added two WEBrick proxy servers, one requiring authentication as well as a path to the example server for testing the proxy requests.
Added flash loader stub for F2/F4.
Sms handler for registration process.
Filtering messages from blocked contacts by client
Using system notifications volume instead of media volume

- Stop current notification sound before create a new one
- Removed unused status.py and warequeststatus.py
some bugfixes in omp rebase

Correcting some mistakes I made during the rebase. In addition, the bgl -> dbl typo in Hopping_Matrix.c
Issue #473 Implemented suggestions by kcooney

Issue #473 Implemented suggestions by kcooney and added consistent code
formatting.
Adding helpful link on firstapp page.

Adding a helpful link on the firstapp page so we can link directly to it from places like the getting started section of the pylonsproject pyramid documentation.
Never use eval() to parse data from the network, closes #30

the 'json' module is in python's standard library since 2.6 and using
eval() is a huge security risk.
Small fix to markdown in README

I just noticed that the syntax suffixes * and + were showing up as bullet points in the readme.
Added support of Solaris

Solaris系OSでビルドできるようにしました。(gcc/suncc)
OpenIndiana oi_151a、Solaris 11 Expressで動作確認しています。
Add some additional info about what pid had an expired lock
Remove lutil.extend

Pretty confident that this is gone and safe, just looking for a sanity check.
Implemented new Engine functions from API

Signed-off-by: Irmo van den Berge <bergerkiller@gmail.com>

Implementation of:
https://github.com/SpoutDev/SpoutAPI/pull/272
Fixed bug due to the forgot of 'throw' in getLocalMachineName
README file converted to markdown
Replace $.isArray with Array.isArray

Fix for #1096
add the url to github in the setup.py for pypi

Because it's frustrating to end up here http://pypi.python.org/pypi/ssh/1.7.14 and having not idea on where is the source nor the doc.

Have a nice day,
Updated to work with the current Master branch

Hi there. I've updated this to work with the current head of the Master Rust branch - all tests (including the commented-out ones) now pass, and I had the window open up with a Rust logo inside, so I'm pretty happy with it.
iv_notify.3: Escape the minus sign in "-1"

Groff treats "-" as a hyphen by default, not as a minus sign. Since it is used as a minus sign, it's best to escape it.

Noticed by lintian, while packaging ivykis for Debian. Very minor, and quite possibly irrelevant too, as I can't imagine a situation where -1 would need to be hyphenated. But escaping makes lintian happy without an override, and does no harm either.
BufferMaker new

upgrade to BM 0.8.0
Now handling database access errors in a MUCH better, NOT SILENT way.
Fix tick marks for large Y scale ranges

The tick placement logic used a double loop to look for appropriate tick spacing, assuming that a base unit around 10^50 would be sufficient to cover any Y range. Unfortunately this places 10^100 tick marks for Y values around 10^150, leading to excessive resource usage on typical client hardware.

This patch replaces the double loop with a single loop, finding the starting point by explicit calculation.

It also adds a regression test to catch the defective behavior.
A couple of minor documentation fixes

Hi -

I had an entire list of typos to fix in the documentation, but when I git cloned bottle I found that most of them had already been fixed.  So one small language fix in tutorial.rst and the Routing Order example in routing.rst was still using the legacy wildcard syntax; probably better to switch it to the new syntax?

Question: how could I have done this without forking the entire bottle tree on github?  That is, after cloning, editing, and committing I didn't know what to do with the patch file.  (Sorry if this is obvious, we use mercurial, so I'm not that familiar with git.)
Ok some big changes to Worker Monitoring Reports and reports couch views

- consolidation of xform-related reports views into one place (reports_forms couchapp)
- introducing ReportFilters (eventual replacement of ReportField...both of them can be used right now. more cleanup needs to happen here)
- new DrilldownReportFilter...using it in this case for a form drilldown filter that allows you to get to the form xmlns by choosing application -> module -> then the form. If deleted forms or applications are present, you get an option to choose from those as well. You can also choose an entire application or module within an application and bring up a list of the xmlns for those forms.
- Report descriptions infrastructure in place
- Daily form completions / submissions is now one report with a completion/submission time filter
- Submission Times renamed to Worker Activity Times
- Form Completion Trends renamed to Form Completion Time
- due to the renaming, I now added an option in report dispatcher to specify slug aliases, so old slugs properly redirect to their related new slugs. This is all set up for ProjectReportDispatcher.

This is part 2 of 2 or 3 DIV II reports 'Quick' wins changes. There are more changes on their way, but mostly small formatting / wording changes.

Note that this is _not_ being merged into master, but a separate qa branch that currently is a duplicate of master. This qa branch will go up onto our staging/test server for Amelia to QA on thursday.
stop unnecessary redirecting to the settings page
enable ddbasic and set it default