labofsahil/github-event-dataset-2012 huggingface dataset:
Modified setup.py and version.py to create PyPi package version 0.2.1
Modified so that model is written out to xml and processing.py can detect model type and therefore params
Modified process.py so works with non xml files in the directory
removed a few print statements from core code
Updating with the new test output files
Merge branch 'master' into py2.6
add test for boolean keys
reuturn remaining argv
requires path set
Updating for CSV import
User must be logged in to create or edit blackmail
Authentication now works (sign-in), but still need a sign_in method to call (possibly in users.helper.rb)
added image mime type restriction to the image upload section
Updated TDB examples.
changed imodelserializer signature to not use HttpRequestBase
implemented (sort of) recursive serialization for json
Refactored to use new methods exposed by ContentNegotiator
Fixed test for RVI now that the spec disallows refined contravariance inheritance
update for v5
Improved the glyph names.
rudimentary (untested) gravity
removed debug outputs
OMG BUBBLES FLOAT!!!
Fixed Bubble Drop
version 1.0.con

conservative attitude
use the simple_captcha gem for captcha valid
change to the newest simple-captcha gem
reface the model guide
perfect the units test
fgfgff
Add a StaticPages controller
Create static-pages test
Implement first lot of testing on static page content
Create tests for page titles
Finish static pages
Added QFDo.vim.
#128 checkpoint. very slow.
remove attr_writer
Cleaning out the cobwebs from the closet.
- Further refinements
google group changes
Update to use new jekyllbootstrap.

Signed-off-by: Gary Pamparà <gpampara@gmail.com>
Update site to once again include contribute page.

Signed-off-by: Gary Pamparà <gpampara@gmail.com>
Fully customized layout(Next step is designing sign up page)
error in merging filling-in-layout
IntelliJ support, added a hook to reset calendar metadata
Finished documentation added syntax highlighting for the example at the beginning
Update author list
Merge pull request #716 from jbertram/master

Update author list
Merge pull request #719 from clebertsuconic/master-fix

https://issues.jboss.org/browse/HORNETQ-1058 / https://issues.jboss.org/...
fix on failures on discovery recovery
ALMOST intelligent :D
Fixed few login bugs, added yii cache, sessions moved into DB
Added the cutoff feature for post late fee
Changed the report for maintenance memo and monthly billing
Improved utility billing
enable client log

upgrade cfoundry 0.3.36
enable client log

Change-Id: I271c93cb88127fa727d5bdce5bf137c430983223
Signed-off-by: Pin Xie <pxie@vmware.com>
Reviewed-on: http://reviews.cloudfoundry.org/9840
Tested-by: CI Master <cf-ci@rbcon.com>
Added support for domainmetadata table for configuration loading
Trying something...

Phil Hudson have an error with d-find-aux... what happens if I use a function created with "defun"?
Adding dates parameters for functions to retrieve streams.
Adding functions to retrieve older posts.
Adding functions to retrieve the next part of the stream.

Modifying functions to support this.
Correcting some errors.
Auto-increment package version.
Director: "end" works as expected on RetinaDisplay
JS: Renamed directory: javascript-spidermonkey -> js
changed ipad-hd to ipadhd
Merge pull request #186 from araker/ipadHD

changed ipad-hd to ipadhd
Corrections et optimisations
Merge branch 'master' of https://github.com/cocoto/Complexity-2012
small image upload tweaks
Remove github test
Important translations
readme こうかな？
Update to recorder
Update to recorder
KVM: ARM: Slight API documentation update

Use the term irq_id instead of irq_number to be consistent with ARM GIC
specifications document.

Signed-off-by: Christoffer Dall <c.dall@virtualopensystems.com>
Readme: GA/UTM

[#37816509], [#37816471]
play-only and heat/cool: Simple Atoms w/controls in Text
whitespace and unused style definition cleanup
WIP: document.domain = "concord.org" for embeddable

WIP because for now this is hard-coded.

There should be a pattern specifying config info which
is separate from the repo. In this case the value for
document.domain would come from config info.
changing some gemfile jazz
Point QAE Chrome extension to QAE website
Collapsible information, delete button + modal confirm, custom zoom buttons, better use of cookies, top level nav (hardcoded) with my stock lists.
implement stores and addresses with n:m relation
clean up in sage

Package-Manager: portage-2.2.0_alpha142
remove old sage-clib

Package-Manager: portage-2.2.0_alpha142
remove old sage-baselayout

Package-Manager: portage-2.2.0_alpha142
remove old: extcode

Package-Manager: portage-2.2.0_alpha142
remove old: doc

Package-Manager: portage-2.2.0_alpha142
remove old: notebook

Package-Manager: portage-2.2.0_alpha142
remove old sage-data-conway-polynomials

Package-Manager: portage-2.2.0_alpha142
remove old: data-elliptic-curves

Package-Manager: portage-2.2.0_alpha142
remove old: data-graphs

Package-Manager: portage-2.2.0_alpha142
remove old: data-polytope-db

Package-Manager: portage-2.2.0_alpha142
remove old: polybori

Package-Manager: portage-2.2.0_alpha142
remove unused givaro

Package-Manager: portage-2.2.0_alpha142
remove old libsingular

Package-Manager: portage-2.2.0_alpha142
remove old and unmaintained m4ri

Package-Manager: portage-2.2.0_alpha142
remove old m4rie

Package-Manager: portage-2.2.0_alpha142
remove old pynac

Package-Manager: portage-2.2.0_alpha142
remove old sage-latex

Package-Manager: portage-2.2.0_alpha142
remove old networkx

Package-Manager: portage-2.2.0_alpha142
finally getting rid of twisted-web2
remove old jmol-applet

Package-Manager: portage-2.2.0_alpha142
preserve old libs to avoid broken toolchain with portage 2.1 thx few for pointing it out.

(Portage version: 2.2.0_alpha121/git/Linux x86_64, unsigned Manifest commit)
Only update speed/time when yielding control
Added EQ
Bugfix for (and)
Add insertion sort for linked list processing
basic setup 

as described in http://cthiebaud.github.com/abendrot/index.html

Change-Id: I3ddbfef6c2d33e2eefe21d06349ae933aa6a8f14
Adding back missed namespace
hello v.1
Add scores only for updated bundles
Add asdoc information
calculate winners
New Arduino 1.0 compatible version.
435 passes for 1.0
Users can now join and leave games
Made user sidebar functional
Remove the TestAddress class in org.infinispan.statetransfer.
dchft fix
schft spread fix
tachf
schf test fix
Add title to web page
Bæta við skrám sem vantar
Bæta við skrám sem vantar
Jeremy fixes
Updated screen title.
adjust credits link [SHA: 21d53442e5b77a3f4a88935323e9bbee671219ae]
added missing time format
removing (:each) from before blocks inside specs
safe new partition diagnostic
implement zfs command
drop unused mdp code
start in on writing mbr ugh
properly extract ZFS labels. resolves bug 148
colorize output by type. kill footnote on dump_fs()
WorldGuard fix. Works now!
change profiling to benchmarking

BUG=

Review URL: https://chromiumcodereview.appspot.com//11262043
Add an OAuth2 landing page.
Merge pull request #62 from dart-lang/authorized

Add an OAuth2 landing page.
Initial Commit: OFRegex
Committing source code from Gray Hat Python website
Adding missing exception:
DBG_EXCEPTION_NOT_HANDLED = 0x80010001
more inheritance killing
Set color for JavaDoc attributes different from their values
Added title screen
Merge branch 'master' of https://github.com/davidbalbert/pumptrain
Make sure to unbind KeyDown after game starts
created $.fn.loadImages
	$.fn.loadImages = function(c, s, b, f) {
		var c = (typeof c == 'function' ? c : $.noop) || $.noop,	// complete callback
			s = (typeof s == 'function' ? s : $.noop) || $.noop,	// step callback
			b = (typeof b == 'function' ? b : $.noop) || $.noop,	// before callback
			f = (typeof f == 'string' ? f : '*') || '*',			// filter results
			loader = new Image(),
			loaded = [],
			loadImages = function(srcs) {
				var srcs = (typeof srcs == 'string' ? [srcs] : srcs) || [];

				if (!srcs.length) {
					c(srcs);
					return;
				}

				loader.onload = function() {
					loaded.push(srcs[loaded.length]);
					s(srcs[loaded.length - 1], loaded.length, srcs.length);
					if (loaded.length == srcs.length)
						c(loaded);
					else loader.src = srcs[loaded.length];
				}
				loader.src = srcs[loaded.length];
			};

		$(this).each(function(index, el) {
			this.element = $(el);
			var self = this,
				imgs = this.element.find('img[src], *[style~="url"]').filter(f),
				urls = $.makeArray($.unique(imgs).map(function() {
					return $(this).is('img')
						? $(this).attr('src')
						: $(this).css('background-image').replace(/((url\()+(\'|\")*)|((\'|\")*\)+\;*)/g, '');
				}));
			b(imgs, urls);
			loadImages(urls);
		});

		return this;
	}
Update listOfPokemon.txt
make test prepare db correctly and fix mistake in test
Added active scope to restaurant search.
NPM supports optionalDependenciesgit diff --cached!  move {msgpack, coffee-script, JSONSelect} to optional status.  fixes #12
add github push to the 'publish' flow
version bump "0.2.16"
Migrowanie bazy kanji do sqlite
Add more instructions on generating PDF in readme.md
Merge branch 'develop'
Improving PS1 documentation.
removing framework directory
Updates for comment classes
Reworked commenting and comment loading. Potentially fixes #182.
experimenteren
alert experiment
images! lots of images added...
file://localhost/mydata/
Updated gradlew to 1.2

added more entries to .gitignore for ignoring many of the common Java artifacts

Added a task for creating the initial project layout
apps.theme.common.django.html: Load generated models unless debug and EXTJS4_DEBUG is true.
apps.superadmin...devilry_extjs_jsmerge: Explicitly require RestProxy.

We need this hack to avoid syncRequire RestProxy in the new MVC-apps.
This only affects the old apps, so a small hack like this should not
be a problem. Fixes #321.
adding exceptions, closes #2; adding basic SELECT framework for music query, #1
Added SoundViewController
Update README.md

have moved readme to md file
adding squishee_cup
minor (incomplete) changes
Inserted skeleton for modifying DVs based on hidden power
added javascript

added code for star ratings

<div id="star"></div>

Signed-off-by: dholdaway <d.m.holdaway@googlemail.com>
Hize un cambio al index agregandole un 2
Passing error and file arguments when emmiting close event.
Signatures for MS Office and TAR files
Added French translation. Thanks djphil!
Added `MockUser` to enable testing of `unique` validator without database
Added test cases for `unique` and `confirm` custom validators
Removed a duplicate repo and removed vivo since it doesnt even boot with CN.
Agregados los casos de uso de la seleccion de figuras junto con sus
operaciones
adding decidability and reducibility
Added BOOT_WAIT to allow network to build.
added check_run.sh ; append livelog file (>>) instead of just opening (>) normally:
with this you can use the logrotate "copytruncate" method
Added token caching
play bell on steal
pagelogo changed
Added a function to test for the existence and executability of MySQL
Dojo@Itaperuna 23/03/2012
Dojo@Itaperuna 23/03/2012 - corrigindo readme
Dojo@Itaperuna 23/03/2012 - corrigindo readme
Merge pull request #2 from deyvin/master

Dojo@Itaperuna 23/03/2012
Added Database tables
added a bunch of userish stuff using mozilla persona and passport and passport-browserId express connect packages
Added coffee-script to required node packages
Try nohup.
Changed nuget information
For testing of crm_invoices
Catch DeleteRestrictionError
input/touchscreen: mms_ts reduce log spam from touching
initial commit
Listo para test final
Query usando contains no funciona
version entrega
Commit Inicial en Github
gemset etc working
x
Cleaned up the org config and changed from the old remember package to
the newer capture package.
fix puppet 2.6 incompatibility
fix issue 5 and 7. Can use tabs or spaces.
updating documentation with the tab characters
Merge remote-tracking branch 'mkrakowitzer/master'
Site updated at 2012-09-21 13:13:46 UTC
为DefaultGenericConverter的getProperty方法增加数组、List、Set、Map支持并添加相关单元测试用例
anorm
default values for sqlite memory database
Now automatically deleting non supported data store.
Delicate: fix sharing condition
Removed Bootstrap hooks from html and rewrote for Chrome style CSS.
more usability improvements for clickcounter example
Proveedores y roles ok
Voodoo sound: update to driver v5

- New speaker tuning mode for music using different
  hardware EQ settings than stock ones
- Microphone presets now supported on Nexus S.
- Microphone presets balanced and loud reworked
  with lower background noise and higher dynamic range
  for balanced: -2dB noise, +6dB dynamic range.
- New DAC direct option: reduces distortion and improves
  SNR by a small margin (bypass usless analog channel mixer)
- Anti-jitter mode on by default.
- Same exact source is now used on each device supported
  (still: only useful code is compiled in via ifdefs)
- ability to fully disable/re-enable the driver and
  its sysfs interface: 0 or 1 in
  /sys/class/misc/voodoo_sound_control/enable
- refactored source code
modificando views y models
.agregando el gitignore
Initial import.
accounts
passing all tests
scheduling and parsing data is operational
new version
config
gem
gem
gem
rvmrc
bundle
bundle
db
deploy
deploy
deploy
deploy
deploy
deploy
attempting to port simulators
Unit-test #2 of MiniParser
Made things bold.
fixed backup RAM file saving when using disc swap with Mode 1 cartridge
improve radio checkbox align
fixed config style and code style
Adding underscore.js dependency
Don't care about node.js 0.9.x yet
more WebServiceData implementation; broken
Added fail and success actions
Rename learning_platform to advanced_french
minor CHANGELOG formatting update
Remove duff NR post
Replies are now transmitted asynchronously, in order
Struct used to pack payload.
Complete basic move command.
-relative path to js and css files in view.json
-change config object
-cache as a configuration param
-mods can't be undefined
typo
ivy style
Scaladin Hello World quickstart blog post

* On top of that, sort out quickstart section with further information
about m2eclipse-scala compatbility.
* Add an FAQ section that can be referenced from documentation,
blog...etc.
apps.subjectadmin.tests.dashboard: Fixed tests
devilry_subjectadmin...controller.managestudents.Overview: Cleanup.
Updated: Argonought JavaScript Library
moving src to android
Fix lack of a required newline
Added create_docroot and change documentroot permissions with owner and groupowner.
real_docroot removed. Dont need it, because docroot cant be blank.
Merge pull request #1 from tiengo/master

Create documentroot function.
we don't need to specify the 'all' target explicitely
Tightened header, lined up title + nav
Unable to see resources if person not on friends list
Removed 'Delete' link from friend resources.
fix aufs3
added media queries
removed cv link
add new queue file
Initializing GraphTheory
Quarta Aula
updated logo font
Merge branch 'master' of github.com:fernetjs/tuiterFighter
updated logo size
big refactor
some fixes
Merge branch 'release/1.2.1-1' into develop
Don't test specific errors, it will fail for various reasons.
Release 1.2.1-2
Merge branch 'release/1.2.1-2'
Pass more metadata along for more descriptive prompts.
Merge remote-tracking branch 'upstream/develop' into feature/robyn
Update file renaming.
Moving to proper directory.
Unused params.
Removing route to repository.
working on #64
Script fixture
poprzednia wersja posiadala bledy w db i w nazwa importowanych pluginow. Wersja poprawiona
add a StaticPages controller
add tests for about, home, and help
finish static pages
Minor tweaks to 3-cafe assets.
OCCHIO!! Ho cambiato le cose che non mi piacevano, ragazzi mancano le
pagine di partners.
speedup in jpg handling
restored cr2 support
restored autorotation
Slimmed down the car_controller methods.. example : current_user.cars
Implemented final leg of pluggable templates, there were a few spots where things were still hardcoded or difficult to configure outside Sitebricks. Also rewrote the logic for TemplateLoader to be easier to follow, more intuitive, quicker to return when templates are explicitly set, and more deterministic (will no longer attempt to load the default template if Show is explicitly set and the expected template could not be found).
Merge pull request #29 from fuzzygroove/templates

Really Pluggable Templates
Support HTTP 'PATCH' method
Merge remote branch 'upstream/master' into patch
Pull the correct template renderer using the file extension. I plan on making this better by explicitly sending the matched extension instead of relying on filename.
merge with templates branch
Merge branch 'patch'
new class ofxTangiblePolyline
not possible to extend ofPolyline this way
moveListenersSpeed() added
let nginx return a 503 when in maintenance mode
Test standalone attachments api
Standalone attachments api for remote couchdb
store pouch attachments in seperate object store
fix url from jquery, uuid and pouch
password fix. Lift renders the snippet SHtml.password. Whatever you've in the .html it doesnt matters
test

Signed-off-by: Green <393335407@QQ.com>
first commit
adjusted speakers wall
added hover handler for palaisclick
Merge branch 'master' of https://github.com/gentics/jquery-eu-2013
debug mapbox.js load
sanitized OSX files
This works with id
	modified:   flaskr.db
	modified:   flaskr.py
	modified:   templates/show_entries.html
Complete the basic parser of packet config.
Uppercase "Yes" class caused both answers to be visible

all classes must be lowercase
added an admin boolean attribute
Merge branch 'updating-users'
adding an admin field
delete admin boolean
broken admin field
almost done
broken admin field
non-admin delete link
remove search when no results
Add SelectionRange documentation.
See #2531421 adding aria roles and keyboard navigation for arrow expand/collapse of trees
Torrent indexer as a command subclass
Remove the user option file.
Add user option file of VS into .gitignore.
added policy iteration
Only look at .js files
Merge pull request #3 from theefer/master

Only keep .js files
Added new route when payment received
Added header files to begin defining classes I'm going to use
xdm background
想了半天还是用disqus的评论
fixed js error; improved syntax error handling
added send mail action
fixed sender email address
ui enhancements
don't store pointers in list, store objects directly
highlights list desc order
show counts of highlights in Weibo status text
Fix Bug: highlights showing no ordering the same as saved, add 'ordering' by '-id' in Meta class
add Weibo access token expires_in validate
0.0.4 shallow record copy to work on Express 2
Applied Global code formatting. The code looks shiny now :)
Updated ignored files list.
Default controller clean-up


Change-Id: I3a30bded12d39f5fe81fa24625a676db8e9f3440
Add pay button and change add alert button
Merge branch 'master' of github.com:he9lin/KASS-iPhone-App

Conflicts:
	Demo/en.lproj/MainStoryboard.storyboard
delete image reference
Please enter the commit message for your changes. Lines starting
styling, home page layout, starting to work in datatables
Merge pull request #30 from henkmuller/master

module_ethernet_smi
Adding some details about our support for unusual frames
Merge branch 'master' of github.com:xcore/sc_ethernet
Add function version of the intialise router API
Add offsets for the ethernet PHY devices.  These may be tuned for the SMSC device
used on the XMOS reference designs.
Adding a random timing test to the ethernet buffering test
Test program for SMI
Exported smi_reg function for testing purposes
checking all networks in Nimbus clouds where no network specified
Update cron times.
adding sqlite to only dev
prova immag
Adding one commit with topic 3
Merge pull request #3 from hershmire/topic3

Adding one commit with topic 3
[algorithme] use \RETURN

Signed-off-by: Jan Keromnes <janx@linux.com>
Add XML test file

Signed-off-by: Quentin Calvez <quentin.calvez@quentez.com>
maj des makefiles AnalyseurMixte AnalyseurDTD AnalyseurXML
Merge branch 'master' of github.com:hexanome/ProcesseurXML
Site updated at 2012-11-06 12:38:52 UTC
changed file not found notification
fixed imports and other minor things
reverse-merged from commit 8ef90f3e25632bd77b4c1ccc1581b3e933e0fc9e
Refactored entire main function and retry method
History.md
Merge branch 'release/1.8.0' into develop
splines kinda working
testing programs
tweaks
point picking working
massive dump of stuff
moved screenshots towards the top of the page..
add partial _fields
稍微修改空格
add bootstrap for backend creation
Octopress init
Site updated at 2012-05-01 08:40:20 UTC
update logout

Signed-off-by: huythang38 <huythang38@gmail.com>
Fix plugin pathes for compatibility with 2.x
Fixing bugs

1. "Link to Parent Column" partially working. (very inconsistent)
It is working if we create new column/list but not working for existed
columns and that is also inconsistent. Some times disabled and some
times even though the check box is enabled it not showing relevant
column in parent column.

2. "Sort by View" option is not working for simple column. I am unable
to test parent child relation case because of issue 1.

3. "New Element" not auto populating the new entry to the drop down.

4. Page refresh for multiple value enabled lookup column.

5. Unable to create lookup column for the same list. (Example, I am in
Tasks list and I want to choose related task from already existed tasks)

6. Dull UI. With the current UI we can not use this in production.
event based alert implementation
完成十三题
Story! - Silly japan people
Try to make jake code pretty
最初のroot :action => 'list'を削除して、正しくpost出来るように修正
perbaikan transaksi penghimpunan dana kafala dan penambahan form presensi pengasuh beasiswa
random train data selector added
Update, as planned. Sun, 15 Apr 2012 22:45:01 +0400
Update, as planned. Mon, 14 May 2012 11:39:01 +0400
Update, as planned. Mon, 23 Apr 2012 21:49:02 +0400
fixed improper routes
adding dialog button
fixed a little size thing on the total
Removed content pasted in by mistake
bb-sendmail: ssl support, bb-queue:  new labels
Merge branch 'master' of github.com:ioggstream/babel-tools
sendmail: fix iteration bug; iostat: add units
Updated qunit, added new syntax for call overriden methods
Some changes but not working well
Fixing previous version
Fixing previous version - patch matching
Service initialization initial version
Fixing pingDB - not compleate\!
Working status entry
fichier oublies (upload fichier)
Octopress init
Site updated at 2012-10-25 06:07:38 UTC
photo links to flickr lightbox (opens new window/tab)
Don't handle roster stanzas with empty node
replace invalid characters with _ also in groups
Do not join rooms before we're connected to legacy network. Otherwise join requests are lost
Rewrite create_socket so it's portable
Do not call mallopt on BSd
Do not include malloc.h on BSD
include in.h in mongoose
Send ctcp action when /me is received from XMPP
Remove /me from incoming messages, add /me to outgoing messagse
update sample.cfg
Do not force sqlite3 storage backend
Docs update
Merge branch 'master' of github.com:hanzz/libtransport
add RoomList support to libtransport, so backends can send list of available rooms
Get room list on IRC and show rooms in service discovery
Forward message timestamps
Do not dumpReceived()
check if server started in spectrum2_manager
Fixed Twitter backend
Log mongoose error
Added divide by zero case to test
Fixed unittest test__aio.
Fixed checking of amount of data which was read.

1) IOError is not raised but passed to errback.
2) Read error doesn't clear entire event vector and don't drop data.
3) Fixed related unit test.
Fixed indentation in _aio.c.
Site updated at 2012-10-06 06:07:56 UTC
initial feature works
initial feature works
reports results and errors. more to come
updated readme
[mythtv-cmyth] MythProgramInfo UID: add 'recordid' to be unique

- Rename MythProgramInfo::strUID() to UID() and add RecordID in the program info key to be unique.
Changing search form
Added Images, accessoire lua files from Spriteloq
added 1st string to repo
Removing index page
DejaVideo 0.5 - Custom start time, volume controls, etc.
Changes back to original

Pages did not render properly.
Added comment on the function
Added multiple ajax request to deferred
SWITCHYARD-757 add Java to WSDL support in Eclipse tooling
Abandon project. Say farewell.
Initialize rails framework & put Gemfile together
* Incio del proyecto
Fixes whitespace problem in last commit.
sash can be configured in runtime

Signed-off-by: Jeeeyul <jeeeyul@gmail.com>


Signed-off-by: Jeeeyul <jeeeyul@gmail.com>


Signed-off-by: Jeeeyul <jeeeyul@gmail.com>


Signed-off-by: Jeeeyul <jeeeyul@gmail.com>
FIXME/reactivate test.ParseEdgeList for missing points

* Have (re)discovered that the parser routines are not robust for missing points
* This could occur when point numbering omits one or more points
  There is no reason this should happen with the present input system since
  point number is inferred from the skeletonize file as an integer sequence
* BUT what can happen is that a single isolated point will not have any
  neighbours in the neighbour list resulting in a missing point
Fix for ParseEdgeList for lists with missing points

* even if a point is completely missing the edgeless can now
  be properly parsed
stop on error in ParseAM3DToNeuron / ReadNeuronFromAM3D

* leave it up to the callee to decide what to do if there is a critical error
  (rather than returning NULL)
Add a test for a neuron with an isolated segment (which passes)
Deactivate test of reading neurons with isolated point(s) for the moment

* single isolated points still breaks things
Fix off by 1 error in RerootNeuron

* curiously this reverts most of an earlier commit f816e0c13a331d80fd00c4cbbe6b1ad6f91d6b4e
Extract a more generic function CoreNeuronFromPointAndEdgeData from ParseAM3DToNeuron

* Idea is that CoreNeuronFromPointAndEdgeData may get reused
* and/or replaced with something more robust
teach subset.dotprops to use its own variables in subset expression

e.g. subset(dp,alpha>0.5)
as.dotprops sets column names for points if missing

* easy mistake to make when constructing from scratch
fix error in transform.dotprops

* warn is not a function
Teach DotProperties and subset.dotprops about neuron Labels

* these usually contain a default (2) for most tracings 
* but we can now read materials from Amira skeletonize tracings
Add CalculateBackgroundParams and UpdateOrCalculateBackgroundParams

* copied more or less verbatim from FruMARCMCode repository
  as used in Cachero, Ostrovsky 2010
Docs
Teach UpdateOrCalculateBackgroundParams to take directory as input
Option to use signal maximum or histogram upper range as max in CalculateBackgroundParams
typo
fix warning in CalculateBackgroundParams
pass ... to CalculateBackgroundParams
Add options for output type (float), centering (node) and newmax
improve handling of non-float output types

* need to quantise at the end rather than before smooting
 (ie always use a float intermediate)
Ugly interim commit just to get some code transferred.
This does NOT work with the current core release.
Changes to the color filter to finish bringing them into the new output filter model.
Moving VixenApplication and DummyLighting in-line with the newest core changes.
Changes to DummyLighting to get it to abide by a new data policy implementation.
Modules are now compiling in Debug against the latest core.
Add NShape library in Common.
Add preliminary work for filter configuration form.

Basic and not particularly functional at the moment, but the idea is there
for using a simple NShape diagram and custom shapes to represent the filters,
channels, outputs, etc.
Add parameter to NShape DiagramDisplay to only have clicks affect top shape.
Add hack to NShape selection tool to only select the top-most shape in a stack.
Continued investigation work into the filter config form.

- expanding/collapsing of channels
- automatic layout
- start of security work
Refactored the custom filter shapes: shapes for channels, controllers, etc.
Added ability to remove filter shapes, and added shape cleanup when instantiating.
Revamped the filter config form a bit more: using DataFlow objects now, and added colors.
Add a custom connection tool to manage the NShape connections, specific to the filter setup form.
Add cursors for the ConnectionTool.
Fix issue with the drag-hovering not always selecting the appropriate shape on connecting.
Misc cleanup of filter setup form: removing debugging stuff, renaming variables, etc.
Misc changes to Filter Setup dialog suggested by resharper. Removed unused code.
Added filter shape stuff to filter config form. Also added generation of patches and filters
from existing system links. Also a bunch of small bugfixes for things in there.
Fixed issue where output filter shapes wouldn't be snapped to when patching/linking.
Fixed sizeof incomplete aggregates, allowed "typeof" keyword
Added bogus warning bug
unistd _exit
Fixed parsing of 0b[01]+ constants
const-fold fixes for asm output
extern symbols aren't checked for reads
Fixed compilation due to merge from asm_backend_recode
?: expression struct checks + segfault fix (e->lhs)
decl_new_type instead of type-specifics
Merge branch 'master' into oldfunc
Output is now in .csv
Genome topology is now based on inputfile
fix NoSuchElementException when no comments

Fixes the following error when looking on a new pull requests with
no comments yet:

Sep 9, 2012 2:27:10 PM hudson.triggers.Trigger checkTriggers
WARNING: org.jenkinsci.plugins.ghprb.GhprbTrigger.run() failed for xxx
java.util.NoSuchElementException
        at org.kohsuke.github.Requester$1.next(Requester.java:212)
        at org.kohsuke.github.PagedIterator.fetch(PagedIterator.java:42)
        at org.kohsuke.github.PagedIterator.nextPage(PagedIterator.java:57)
        at org.kohsuke.github.PagedIterable.asList(PagedIterable.java:20)
        at org.kohsuke.github.GHIssue.getComments(GHIssue.java:184)
        at org.jenkinsci.plugins.ghprb.GhprbPullRequest.check(GhprbPullRequest.java:46)
        at org.jenkinsci.plugins.ghprb.GhprbRepo.check(GhprbRepo.java:60)
        at org.jenkinsci.plugins.ghprb.GhprbTrigger.run(GhprbTrigger.java:92)
        at hudson.triggers.Trigger.checkTriggers(Trigger.java:259)
        at hudson.triggers.Trigger$Cron.doRun(Trigger.java:207)
        at hudson.triggers.SafeTimerTask.run(SafeTimerTask.java:54)
        at java.util.TimerThread.mainLoop(Timer.java:512)
        at java.util.TimerThread.run(Timer.java:462)
Merge pull request #1 from accek/master

fix NoSuchElementException when no comments
changed methods from overrides to take primitive types
replace ช่องว่างของชื่อ building site
Merge remote-tracking branch 'origin/master'
MMI-31: adding missing properties for person extension
NEW BRANCH: M56_MonkitorCore
All files commit - recursion over directories done.
Moved filesystem tools to a separated/reusable module called fstools for code clearing.
removed less js file.
gitignore modifs.
Git Ignore files.
Files cleaning.
Watching files from grunt task.
Adding function comments. Changed fn signature name
Moved test
Test for googlecode issue #18
local things works
add oracle-jdk-bin ebuild with automatic files fetching
fixed form_tag bug in views
Enable PKCS11 and build ssh-pkcs11-helper
Changed response checking so it guarantees data is downloaded by the time it's accessed.
Merge pull request #5 from jarseneault/master

Check for completion of data before returning response
[https://github.com/jmervine/newrelic_data/issues/3] adding time formatter
Cron scheduling for mailchimp task
set root route, and some styling love
DRY the master feed name and preserve locations so that feeds always point to same filename
Added user sing in and out functions
Updated track block to include signal state, the next and previous blocks and the grade.
very primitive 'link href' replacement
implement --link switch, to replace link href's
document --link switch
Fix Gitignore
Add CNAME for custom domain on GitHub
Add favicon
Add all the old posts =/

I hate my old writing. Need a draft flag.
Tidying some styles
Tidy homepage, head & add proper archive
New Arming flow for recording in place!
Merge pull request #996 from oc666/jhtmllist

Joomla CMS [#26564] JHTML List User an J1.6
New Git Perl Learning Project!
setting up the bandwidth monitor
Don't reset elements that are typically used for layout and semantic groups of content.
simplify TestDerive (it doesn't need function definitions, just values)
work on linear arithmetic
work on Summary...
kernel->flow, begin defining Flow concept
implemented actual header update on S3 objects
support for removing headers; support for all supported header types
Update index and browser.test.html files.
no need to use python3.
Add sample email we will be parsing.
Add basic functions of emailParser.
For now, just attempts to grab headers,
will leave emailLines with message body.
Partial automation.  Generate issues notes for a particular release
Ditjhaba & Yanhui: Added integration tests for the repository to use the Session Attendee attending and not attending buttons.
Amended install files
coding standard content router
Adding nrw.ak.jugend
fixed linking with llvm-gcc and refactored code.
Probleme mit dem Align
Added mysql python
Adding step definitions to facilitate merging of multiple consecutive "I (should|should not) see " clauses on single statement, adding one example as well
add mobile conversation
Fix issue #3473 Wrong profile icon size in tag stream
update gem typhoeus 0.4.2
Merge pull request #3495 from movilla/search_tag_images

Fix issue #3473 Wrong profile icon size in tag stream
Merge pull request #3493 from movilla/conversation_mobile

Add file mobile conversation
Merge pull request #3497 from movilla/update_gem_typhoeus

update gem typhoeus 0.4.2 [ci skip]
Merge pull request #3488 from devendram/cukes-refactoring

Adding step definitions to facilitate merging of multiple consecutive "I...
Add Community Pivotal Tracker infos
Merge remote branch 'upstream/master'
Merge branch 'master' into justinthomas.name
added mouse movement trimming
working on 1.8.7
captured Ctrl-S - now saves topic
Strategy ans Frontend gegeben um Rueckmeldung auf Eindeutige oder nicht eindeutige Loesbarkeit zu bekommen
Merge remote-tracking branch 'origin/master'
fixed QR code merchant URL
fixed QR code merchant URL
clarification in serialEvent() function --KW
Removed MainActivity and replaced with MessageListActivity and some UI change.
Update current codebase to utilize Barebones
Committing to move changes to unix env. and test
The prototype task list and updated engineproof presentation
save run for perfectoptionagent
remove prints from options2, agent.
Merge branch 'master' of https://github.com/kespindler/cs295-final
Removing unsafe declaration.
ignore linked folders/files
js: cassation filter actions
Octopress init
Site updated at 2012-09-15 16:26:35 UTC
optimise fade transition
More py way
july 5
Math Subfolder
Small logo image changes.
tversky, jaccard, mountford similarity indices
Merge branch 'master' of https://github.com/kollokviegenerator/mvp
base: genlock: Remove genlock_release_lock and associated ioctl

Allowing a lock to be asynchronously released while a handle
was still active turned out to be too dangerous to use in a
multi-threaded environment and it served no pratical
purpose anyway.  Handles now hold an attached lock until they
are destroyed.

CRs-fixed: 333141
Change-Id: Ic0dedbad8050ff01927ddb165c65a939bf297c10
Signed-off-by: Jordan Crouse <jcrouse@codeaurora.org>
cmd flag to compile template with AMD style
this parameter tests
Fix handling of this parameters in helpers

Fixes issue introduced in 727eb26cb6a9e89ab08596dedbabcec0becb4d75
Merge pull request #282 from kpdecker/this-param

This param
Recognize bar='baz' hash argument
Merge pull request #291 from leshill/quotes

Recognize bar='baz' hash argument
Merge pull request #276 from HoffmannP/master

AMD support (second proposal)
Merge with upstream/master
changed the file name of homework
original .gitignore file
Merge branch 'master' of ssh://git@github.com/krystalkid/selfscience.git
Backend: Improve metadata renderer
Disallow "select" field for metadata (for now)
hiddentext
github snapshot: 0104124514
move rbenv
adding perlbrew
Update listofpasswords.txt
Merge pull request #1 from Lovelotus1st/master

new pass
updated to newest ofxLibwebsockets ( will be moving to a submodules soon )
Ignoring video files in "videos" directory
TEST
Merge branch 'refs/heads/master' of
https://github.com/lalo73/TPFinal-Cliente.git
Agregadas pero no implementadas algunas interfaces. presunta interfaz
final de la clase Cliente
working accordions now
changed display dimensions
New config file for ckeditor
Custom fonts in ckeditor
Product videos
do not add to list on creation
abcmidi-2012-11-15
Implemented reset password functionality.
no flash, no player
twitter bootstrap
unnecessary images
broken page index in php include snippets
js cleanup
adapted javascript for bootstrap
starting to adjust the flow
header ok
initial footer
sidebars
afixing tabs on scroll
content done
resized camera icon
in place fixes
the last version of interact ..new branch will be created
still having issues with video widths
Refactored send code into a function.
Added weechat script
Got further in creating the layout for the view devices activity.
Low health warning

Added an audible warning when health is low.

Use the convar cg_lowHealthWarning to adjust the threshold at which it
starts. 0 means it's disabled.
LPS-30229 add manual checkin for open in ms office feature
LPS-30229 Forgot upgrade SQL
LPS-30229 Go to sql dir and run "ant test-sample-sql".  Since column has changed, this test is now broken without this fix.
LPS-30229 Source formatting
LPS-30229 rebuild services
LPS-27667 Wrong order
LPS-27667 Source formatting
LPS-27802
LPS-27802 Source formatting
LPS-27802 Source formatting
LPS-27849 Small files are now created.
LPS-27849 Source formatting
Test Fixes - properties/usersallownumeric/users
Added screen schot of final level
Explicitly require dm-sqlite-adapter in Gemfile

Signed-off-by: Tim Ekl <lithium3141@gmail.com>
Site updated at 2012-08-23 20:32:17 UTC
Disabled legend (only for the ijkdijk project)
added new forms to listing pages
added graphing
when no window or people sensor data return value will fail
fix it
Filled parent pom a lil'
sorting feature:   plugins/redtube.zip
	sorting feature:   redtube/plugin.json
	sorting feature:   redtube/redtube.js
removed tests and examples from distribution script
Pull out runtime stuff from Stylus module.
Docs for the Runtime module [ci skip]
wtf is going on with this old code
Adicionadas imagens da home e html

Signed-off-by: unknown <Luciano@Luciano-PC.(none)>
configurado...voltar a adicionar annotations
New vim setup
add license to recipe and convert to full compile phase exec
updated jquery gem, FactoryGirl syntax, unit test FactoryGirl syntax
solve the compatibility problem on Firefox
changes jc
pwork_space
Merge branch 'master' of https://github.com/maninsoft/smartworksV3.git
Change font size
Merge branch 'master' of https://github.com/manuw/manuw.github.com
changes for panel de control
Merge branch 'master' of https://github.com/marcobaboin/bazaya-wms.git
changes for panel de control
change on shipping label
formatted tab
Tracker updated until March 30th. The new module is working with some limitations. Needs more work on Fiducial rgistration.
reorganized mo controller, updated documentation
updated icon and deleted useless files
gui presentation
Backport .travis.yml
Merge branch 'development'

Conflicts:
	.travis.yml
Clone: fix indentation
Add git_indexer_stats field to git_remote

Also removing all the *stats parameters from external
APIs that don't need them anymore.
Add accessor for git_remote's stats field

Also converted the network example to use it.
Convert checkout_index to use progress callback
Convert checkout_* to use progress callback
Remove checkout_stats from git_clone
Remove dead code
Example: compile fixes (not yet working)
index: remove read_tree() progress indicator

git_index_read_tree() was exposing a parameter to provide the user with
a progress indicator. Unfortunately, due to the recursive nature of the
tree walk, the maximum number of items to process was unknown. Thus,
the indicator was only counting processed entries, without providing
any information how the number of remaining items.
Fetch/indexer: progress callbacks
Fix example compilation
Fix clone.c's indentation
Clone: in-line callbacks for progress

Also implemented in the git2 example.
Adjust for rebase
Correct progress reporting from checkout
Indexing progress now goes to 100%
Fix broken tests
gitno_buffer: callback on each packet

The fetch code takes advantage of this to implement a
progress callback every 100kb of transfer.
added bootstrap to waitpage
moved to another package
a new cookie is generated aop if it doesn't exist

userId can be returned as a String
UserRepository create returns User
httpRequest and httpResponse are added to Controller methods as
arguments
merged HistoryController
Print configuration
koumpi insert
koumpi insert
koumpi insert
koumpi insert
smaller add/delete buttons
Update README.md
Merge pull request #2 from matafa/patch-1

Update README.md
Update solarized settings.
include user agent string
Skinned settings for a little bit. Fixed toolbar on Canary.
find a random word of the current tracks lyric using musixmatch
connect to gracenote, search by lyric
add highlighting
Added media session friends wizard step (just for handsets)
Added time property to media session
Attempting to fix README.md code syntax
B-brzewo
the final version minsu_opencv package
Edited email text
Add template editing form
Add course sharing links. Closes #25
correct 'edit own issue notes' permission #966
Take the password salt into account when checking for admin account change
Use `:counter_cache` to optimize queries.
few fixes and focus on facebook
DateTime is local now.

New Visits should be working!!!
MBeans on requests

Requests can be tracked also via MBeans. For each MIME Type and for each
CQ5 template a dedicated MBean is now created which allows to keep track
of these statistics:

* Number of requests for such resources
* Accumulated duration of these requests

Additionally there is a servlet /bin/requestinfo.json, which exports
the data of MIME-type based MBeans via JSON.
refactoring

renamed OsgiCounter to OsgiEventCounter and adjusted MBean names as
well.
added error message in case of unbound repo
refactoring
cleanup IDE specific project files
MVN cleanup
MVN cleanup
MVN cleanup
cleanup
MVN cleanup
MVN cleanup
remove unnecessary logging statement
property not needed
Merge branch 'master' of https://github.com/joerghoh/cq5-healthcheck
cleanup
cleanup
retrieve email settings from DB, not configuration
updated README with proposed dev cycle
removed documentation - code should be its own documentaion
added lint task for coffeefiles to Cakefile
Properly detect JAVA_HOME
Numbers are also allowed for AWSAccessKeyId
added testing snippets for cashflow class

added testing snippets for cashflow class
Updated docs for nodes/get-many to be a bit more accurate.
Merge pull request #13 from zoldar/nodes-get-many-docs

Updated docs for nodes/get-many to be a bit more accurate.
Revert "Changes to voting API"

This reverts commit ccc8710e5e85d4ea89a647a232bc3580caadfae4.
Getting AST dump as you type (quite fast too).
added addoptionXXX to option command
Tidied code up and added nifty bit for checking the animation to do. Also added a basic demo
Updated min.js
Merge pull request #1 from jackfranklin/master

Bit of a Rewrite
Amazon S3, config vars to env
arrows for sorting and such
Merge branch 'master' into tryRequests
remove tabs
resolve conflicts
remove conflict markers
gitignore
fix typo in executable
dont track static
Added branch image
Added the table creation for the nubefy_tweet model.
Implemented 'enabled' and 'disabled' helpers.  Partial implementation of 'checked'
Initial barebones port of Ember.js Mixin and CoreObject classes
Merge branch 'master' of https://github.com/mjeffery/handlebind.js.git
Moved license information to the bottom of the readme and put the license name (MIT) in the header so that you don't have to actually read the license to figure out what license it is.
formattin modalz
Merge pull request #11 from mmichael0413/en-modal-forms

formattin modalz
Bug #3356. IE7 and IE8 doesn't implement correctly the javascript 'for in' instructions with arrays; it browses also the methods instead of only the fields (thus the array content!). So, fix this by a workaround that consists to replace the use of an array by a plain object (aka {})
Bug #3324. The preselected user groups are now get at web page loading like the preselected users. For doing, The UserGroupManagement object accepts to load a specific group identified by its unique identifier and the UserGroup object provides a new method, load, to get information about the represented user group from the server.
Bug #3324. The preselected user groups are now get at web page loading like the preselected users. For doing, The UserGroupManagement object accepts to load a specific group identified by its unique identifier and the UserGroup object provides a new method, load, to get information about the represented user group from the server.
Merge branch 'core-5.9.x' of github.com:Silverpeas/Silverpeas-Core into core-5.9.x
Merge branch 'bug-3356' of https://github.com/mmoqui/Silverpeas-Core into mmo-bug3356
fixing bug #3247
When getting members of a group, attributes of group were used instead of attributes of user
after fixing bug #3247, using Java6 code style
Merge branch 'core-5.9.x' of github.com:Silverpeas/Silverpeas-Core into bug-3323
Prueba desde la Mac
Added merge-strategy to cherry-picking to enable updating changeSets, currently there's a new commit for each new changeset
corrected theme inconsistencies
Первый публичный коммит
edited path conflicts
commented out last line in app.rb
add_photo and add_journal lined up now whether there is content for day or not
Added tests that verify the interval progression of numbers.
Added support for Int64 in RandomNumericSequenceGenerator class.
EOD - static files added
use new line for many paynments in dashboard
update minor gammer
Mouse Click, Press, Release implememnted
Adding compact reordering model
refactoring psd...
Fix warning: an array subscript is of type char (-Wchar-subscripts).

According to gcc documentation, this is a common cause of error.
See: http://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html
Merge branch 'master' of github.com:moses-smt/mosesdecoder into fix-wcharsubscripts
Merge pull request #15 from tetsuok/fix-wcharsubscripts

Fix wcharsubscripts. ok, i'll take your word for it. HH
vijay|#00|added toString to seed Version class
Vishal #0 Excluding decision-tree dependency
Merge branch '0.3' of https://github.com/motech/motech-delivery into 0.3
Fixing a few more pathing issues
Merge pull request #100 from rossbruniges/dev

Fixing a few more pathing issues
added binary plist support
Fix. :/
First Commit
Merge branch 'master' of https://github.com/msslaughter/netTopoSim
Spelling and grammar fixes
Merge pull request #4 from ojarva/master

Documentation updates
refactored renderUpdate to properly address the button's value
remove old notification system
Fix display of public new request form
Restructrued project and added more cmd line opts
Add keywords
Merge branch 'master' of github.com:naoty/naoty.github.com
if tests
into swap
tests
AUI-685 - Minor demo update
Added some functionality to the bs as map
Add VB.Net version of the tutorial.
Nyah.
another test commit. [refs #1]
Updated Gogaruco 2012 (markdown)
/ ‘High-Performance-Ruby.md’
/ ‘High-Performance-Ruby.md’
+ ‘Charles-Nutter.md’
+ ‘Carina-C.-Zona.md’
/ ‘Carina-C.-Zona.md’
+ ‘Schemas-for-the-Real-World.md’
/ ‘High-Performance-Ruby.md’
Created Rubymotion: rubyizing ios development (markdown)
+ ‘Cargo-Cult-Web-Performance-Optimization.md’
+ ‘Mega-Rails.md’
/ ‘Home.md’
Ter Mar 13 11:07:10 WET 2012 capa viajar
[NGRINDER-50]In user edetail page, if user don't enter password,the
previous password should not be changed. 
Merge branch 'master' of https://github.com/nhnopensource/ngrinder.git
[NGRINDER-83] Add the UI Element to beauty 
- fix for invalid total vuser count..
update the contacts page, make sure everything is in the build
add a robots.txt
fix a channel selection bug