COMP: OpenMP threads are not allowed to "exit" and the asserts in multiScaleLoG are a form of exiting the program

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4648 9053f808-4e3f-0410-9672-ef3bfcbbeb84
BUG: Put maxnumlevels before the openmp statement, 

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4649 9053f808-4e3f-0410-9672-ef3bfcbbeb84
BUG: Put maxnumlevels on proper ompversion test

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4650 9053f808-4e3f-0410-9672-ef3bfcbbeb84
BUG: Forgot an edge case where the dImg/100 (distance map image) is always less than sigma and the resultant LoG image then should be the minimum scale

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4651 9053f808-4e3f-0410-9672-ef3bfcbbeb84
BUG: IFix uninitialized useDistMap variable

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4652 9053f808-4e3f-0410-9672-ef3bfcbbeb84
BUG: Improve robustness of the the reading of the soma centroid file

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4653 9053f808-4e3f-0410-9672-ef3bfcbbeb84
BUG: Do not call SetSomaImage with NULL for the optional soma image

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4654 9053f808-4e3f-0410-9672-ef3bfcbbeb84
BUG: Minor bugfixes to make MicrogliaRegionTracer actually run.

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4655 9053f808-4e3f-0410-9672-ef3bfcbbeb84
BUG: Remove artificial limitation of brightness and opacity thresholds of 250 and limit to 255

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4656 9053f808-4e3f-0410-9672-ef3bfcbbeb84
Features are computed twice when loading time series.

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4657 9053f808-4e3f-0410-9672-ef3bfcbbeb84
textures features commented out


git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4658 9053f808-4e3f-0410-9672-ef3bfcbbeb84
ENH: Load Rotated Table with each row representing a feature and each column a sample

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4659 9053f808-4e3f-0410-9672-ef3bfcbbeb84
ENH: Load Rotated Table, each row representing a feature, each column representing a sample 

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4660 9053f808-4e3f-0410-9672-ef3bfcbbeb84
ENH: tree built from final k-NNG and new layout scheme; compatible for rotated table 

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4661 9053f808-4e3f-0410-9672-ef3bfcbbeb84
ENH: GraphWindow: possible layout algorithm for graphs (by converting graph to tree); ScatterPlot: Add window function to count cells in the averaged bin.

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4662 9053f808-4e3f-0410-9672-ef3bfcbbeb84
BUG: SetAspectRatio before LoadSeedPoints

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4663 9053f808-4e3f-0410-9672-ef3bfcbbeb84
ADD: eccentricity
ENH: reorder segment table, return convex hull headers
RM: SuperEllipsoid (empty file)

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4664 9053f808-4e3f-0410-9672-ef3bfcbbeb84
ENH: image_size_fast is no smaller than 3000 to fix mosaic failure due to large shift of the tiles; Allow to write out the intermediate 2d projection images for debug by setting -debug. 

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4665 9053f808-4e3f-0410-9672-ef3bfcbbeb84
ENH: Load Soma in TracingSystem; BUG: Read Seedpoints and Soma Rendering crashes.

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4666 9053f808-4e3f-0410-9672-ef3bfcbbeb84
BUG: fix >> to > > compiling error in Linux 

git-svn-id: https://farsight-svn.ee.uh.edu/repos/farsight/trunk@4667 9053f808-4e3f-0410-9672-ef3bfcbbeb84