Initial commit, trying to set up a basic structure for the code.


git-svn-id: svn://thep.housing.rug.nl/recover@1 73239943-0ca6-409b-8325-c85178a1d2c3
Dataframe now loads automatically at startup.

git-svn-id: svn://thep.housing.rug.nl/recover@2 73239943-0ca6-409b-8325-c85178a1d2c3
Added tool for producing deviations from an expected value and standard deviation.

git-svn-id: svn://thep.housing.rug.nl/recover@3 73239943-0ca6-409b-8325-c85178a1d2c3
Added ignoring of "output" directory.

git-svn-id: svn://thep.housing.rug.nl/recover@4 73239943-0ca6-409b-8325-c85178a1d2c3
Removed previously committed directory output.

git-svn-id: svn://thep.housing.rug.nl/recover@5 73239943-0ca6-409b-8325-c85178a1d2c3
Added ignoring of "output" directory.

git-svn-id: svn://thep.housing.rug.nl/recover@6 73239943-0ca6-409b-8325-c85178a1d2c3
Ratio plotting functions added, sourcing of those added. Profile updated.


git-svn-id: svn://thep.housing.rug.nl/recover@7 73239943-0ca6-409b-8325-c85178a1d2c3
Added documentation for gaussianChi and almanac data.

git-svn-id: svn://thep.housing.rug.nl/recover@8 73239943-0ca6-409b-8325-c85178a1d2c3
One more plot added, documentation updated


git-svn-id: svn://thep.housing.rug.nl/recover@9 73239943-0ca6-409b-8325-c85178a1d2c3
Added a r0 value inside the almanac. This is dodgy, and should be done with a big error margin at least, but it is the cleanest way around scoping problems for now.
Functions in principle do not use a physical point, except for fps_mps_vs_mps_mn2 (no r0 dependence). The r0 value used is printed in the function, and errors will be used when available.


git-svn-id: svn://thep.housing.rug.nl/recover@10 73239943-0ca6-409b-8325-c85178a1d2c3
Split the dataset labels into two separately meaningful quantities. Normalized Gaussian chi to be 1 at a deviation of 1 sigma (pretty arbitrary).

git-svn-id: svn://thep.housing.rug.nl/recover@11 73239943-0ca6-409b-8325-c85178a1d2c3
Updated plotting functions and manuals to also use the newly defined standard names.


git-svn-id: svn://thep.housing.rug.nl/recover@12 73239943-0ca6-409b-8325-c85178a1d2c3
Added some classes, looking to fix almanac


git-svn-id: svn://thep.housing.rug.nl/recover@13 73239943-0ca6-409b-8325-c85178a1d2c3
Updated the plots to now use the proper form of almanac, and fixed the scoping issue (data.frame needed for the physical point).


git-svn-id: svn://thep.housing.rug.nl/recover@14 73239943-0ca6-409b-8325-c85178a1d2c3
r0_a extrapolation and plotting function added, no results being output yet, pure plots. A simple manual is again included. Also added model directory for future use.


git-svn-id: svn://thep.housing.rug.nl/recover@15 73239943-0ca6-409b-8325-c85178a1d2c3
Added LEC's to almanac.

git-svn-id: svn://thep.housing.rug.nl/recover@16 73239943-0ca6-409b-8325-c85178a1d2c3
Meas defined more properly.

git-svn-id: svn://thep.housing.rug.nl/recover@17 73239943-0ca6-409b-8325-c85178a1d2c3
Prototyping pion fit with lattice spacing.

git-svn-id: svn://thep.housing.rug.nl/recover@18 73239943-0ca6-409b-8325-c85178a1d2c3
Bugfixing in pionfit_combined and adding a placeholder column for Zp to complete.dat


git-svn-id: svn://thep.housing.rug.nl/recover@19 73239943-0ca6-409b-8325-c85178a1d2c3
First version of pion CDH corrections included.

git-svn-id: svn://thep.housing.rug.nl/recover@20 73239943-0ca6-409b-8325-c85178a1d2c3