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A 30-kilometre-wide arm of the sea separates Pond Inlet from Bylot Island, a large uninhabited island of . The waterways between Bylot Island and Baffin Island are Navy Board Inlet , which opens into Lancaster Sound and Eclipse Sound, which opens to Baffin Bay. Navy Board Inlet is the entrance to the Northwest Passage. Eclipse Sound separates Pond Inlet from Bylot Island and has a series of deeply cut inlets west of Pond Inlet, including Milne Inlet, a small inlet, flows south from Navy Board Inlet at the confluence of Eclipse Sound. The Pond Inlet region, including Bylot Island, is covered by the Arctic Cordillera, a terrestrial ecozone in Canada, characterized by a vast, deeply dissected chain of mountain ranges. There are mountains visible from all sides of Pond Inlet. From the summit of Mount Herodier at , which is east of the hamlet, the entire area is visible. Inuit from Pond Inlet travel to the Island regularly and its mountains form a backdrop to the hamlet's landscape.