k3ylabs/cosoco-image-dataset huggingface dataset:
Package: fastlink (4.1P-fix100+dfsg-4)
Section: universe/science
Homepage: https://www.ncbi.nlm.nih.gov/CBBResearch/Schaffer/fastlink.html
Depends: libc6 (>= 2.33)
Description:  faster version of pedigree programs of Linkage Genetic linkage analysis is a statistical technique used to map genes and find the approximate location of disease genes. There was a standard software package for genetic linkage called LINKAGE. FASTLINK is a significantly modified and improved version of the main programs of LINKAGE that runs much faster sequentially, can run in parallel, allows the user to recover gracefully from a computer crash, and provides abundant new documentation. FASTLINK has been used in over 1000 published genetic linkage studies. . This package contains the following programs:  ilink:    GEMINI optimization procedure to find a locally            optimal value of the theta vector of recombination            fractions  linkmap:  calculates location scores of one locus against a            fixed map of other loci  lodscore: compares likelihoods at locally optimal theta  mlink:    calculates lod scores and risk with two of more loci  unknown:  identify possible genotypes for unknowns
Package: fastml (3.11-3)
Section: universe/science
Homepage: http://fastml.tau.ac.il/
Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2)
Description:  maximum likelihood ancestral amino-acid sequence reconstruction FastML is a bioinformatics tool for the reconstruction of ancestral sequences based on the phylogenetic relations between homologous sequences. FastML runs several algorithms that reconstruct the ancestral sequences with emphasis on an accurate reconstruction of both indels and characters. For character reconstruction the previously described FastML algorithms are used to efficiently infer the most likely ancestral sequences for each internal node of the tree. Both joint and the marginal reconstructions are provided. For indels reconstruction the sequences are first coded according to the indel events detected within the multiple sequence alignment (MSA) and then a state-of-the-art likelihood model is used to reconstruct ancestral indels states. The results are the most probable sequences, together with posterior probabilities for each character and indel at each sequence position for each internal node of the tree. FastML is generic and is applicable for any type of molecular sequences (nucleotide, protein, or codon sequences).
Package: fastp (0.20.1+dfsg-1)
Section: universe/science
Homepage: https://github.com/OpenGene/fastp
Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 9), zlib1g (>= 1:1.2.6)
Description:  Ultra-fast all-in-one FASTQ preprocessor All-in-one FASTQ preprocessor, fastp provides functions including quality profiling, adapter trimming, read filtering and base correction. It supports both single-end and paired-end short read data and also provides basic support for long-read data.
Package: fastq-pair (1.0-2)
Section: universe/science
Homepage: https://github.com/linsalrob/fastq-pair
Depends: libc6 (>= 2.14)
Description:  Rewrites paired end fastq so all reads have a mate to separate out singletons This package rewrites the fastq files with the sequences in order, with matching files for the two files provided on the command line, and then any single reads that are not matched are place in two separate files, one for each original file. . This code is designed to be fast and memory efficient, and works with large fastq files. It does not store the whole file in memory, but rather just stores the locations of each of the indices in the first file provided in memory.
Package: fastqc (0.11.9+dfsg-5)
Section: universe/science
Homepage: https://www.bioinformatics.babraham.ac.uk/projects/fastqc/
Depends: libcommons-math3-java, libjbzip2-java, libhtsjdk-java, libfindbin-libs-perl, libsis-jhdf5-java, default-jre
Description:  quality control for high throughput sequence data FastQC aims to provide a simple way to do some quality control checks on raw sequence data coming from high throughput sequencing pipelines. It provides a modular set of analyses which you can use to give a quick impression of whether your data has any problems of which you should be aware before doing any further analysis. . The main functions of FastQC are  * Import of data from BAM, SAM or FastQ files (any variant)  * Providing a quick overview to tell you in which areas there may    be problems  * Summary graphs and tables to quickly assess your data  * Export of results to an HTML based permanent report  * Offline operation to allow automated generation of reports without    running the interactive application
Package: fastqtl-doc (2.184+dfsg-8build1)
Section: universe/doc
Homepage: http://fastqtl.sourceforge.net/
Description:  QTL mapper in cis for molecular phenotypes - documentation The goal of FastQTL is to identify single-nucleotide polymorphisms (SNPs) which are significantly associated with various molecular phenotypes (i.e. expression of known genes, cytosine methylation levels, etc). It performs scans for all possible phenotype-variant pairs in cis (i.e. variants located within a specific window around a phenotype). FastQTL implements a new permutation scheme (Beta approximation) to accurately and rapidly correct for multiple-testing at both the genotype and phenotype levels. . This package provides documentation and example data to work with FastQTL.
Package: fastqtl (2.184+dfsg-8build1)
Section: universe/science
Homepage: http://fastqtl.sourceforge.net/
Depends: libblas3 | libblas.so.3, libboost-iostreams1.74.0 (>= 1.74.0), libboost-program-options1.74.0 (>= 1.74.0), libc6 (>= 2.34), libgcc-s1 (>= 3.3.1), libgsl27 (>= 2.7.1), libhts3 (>= 1.10), libstdc++6 (>= 11), r-mathlib
Description:  Quantitative Trait Loci (QTL) mapper in cis for molecular phenotypes The goal of FastQTL is to identify single-nucleotide polymorphisms (SNPs) which are significantly associated with various molecular phenotypes (i.e. expression of known genes, cytosine methylation levels, etc). It performs scans for all possible phenotype-variant pairs in cis (i.e. variants located within a specific window around a phenotype). FastQTL implements a new permutation scheme (Beta approximation) to accurately and rapidly correct for multiple-testing at both the genotype and phenotype levels.
Package: fasttext (0.9.2-3build3)
Section: universe/science
Homepage: https://github.com/facebookresearch/fastText
Depends: libc6 (>= 2.34), libfasttext0 (>= 0.9.2), libgcc-s1 (>= 3.3.1), libstdc++6 (>= 11)
Description:  Efficient learning of word representations and sentence classification library fastText is a library for efficient learning of word representations and sentence classification, which refers subword information to enrich word vectors.
Package: fasttrack-archive-keyring (2020.12.19)
Section: universe/misc
Homepage: https://fasttrack.debian.net/
Description:  GnuPG archive key for Debian FastTrack Repository The Debian Fast Track repository digitally signs its Release files. This package contains the current archive public key used for that. . You can read more information about the repository from the homepage.
Package: fasttracker2 (1.50+ds-1)
Section: multiverse/sound
Homepage: https://16-bits.org/ft2.php
Depends: ft2-clone
Description:  transitional dummy package This is a transitional dummy package for migration from fasttracker2 to ft2-clone. . This package can be safely removed.
Package: fasttree (2.1.11-2)
Section: universe/science
Homepage: http://www.microbesonline.org/fasttree/
Depends: libc6 (>= 2.29), libgomp1 (>= 6)
Description:  phylogenetic trees from alignments of nucleotide or protein sequences FastTree infers approximately-maximum-likelihood phylogenetic trees from alignments of nucleotide or protein sequences. It handles alignments with up to a million of sequences in a reasonable amount of time and memory. For large alignments, FastTree is 100-1,000 times faster than PhyML 3.0 or RAxML 7. . FastTree is more accurate than PhyML 3 with default settings, and much more accurate than the distance-matrix methods that are traditionally used for large alignments. FastTree uses the Jukes-Cantor or generalized time-reversible (GTR) models of nucleotide evolution and the JTT (Jones-Taylor-Thornton 1992) model of amino acid evolution. To account for the varying rates of evolution across sites, FastTree uses a single rate for each site (the "CAT" approximation). To quickly estimate the reliability of each split in the tree, FastTree computes local support values with the Shimodaira-Hasegawa test (these are the same as PhyML 3's "SH-like local supports"). . This package contains a single threaded version (fasttree) and a parallel version which uses OpenMP (fasttreMP).
Package: fatattr (1.0.1-15)
Section: universe/utils
Depends: libc6 (>= 2.34)
Description:  Utility to control attributes on a FAT filesystem FAT filesystems contain several attributes which do not map cleanly onto Unix attributes; this utility allow these to be controlled directly by unprivileged users on any mounted FAT partition.
Package: fatcat (1.1.1-2)
Section: universe/utils
Homepage: https://github.com/Gregwar/fatcat
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.3.1), libstdc++6 (>= 11)
Description:  FAT filesystem explore, extract, repair, and forensic tool fatcat is a tool to explore, extract, repair and forensic FAT filesystem. Its features:     - Get information about FAT filesystem;     - Explore FAT file system;     - Read file or extract directories;     - Retrieve file & directories that are deleted;     - Backup & restore the FAT tables;     - Hack the FAT table by writing on it;     - Hack the entries by changing clusters and file sizes;     - Perform a search for orphaned files & directories;     - Compare and merge the FAT tables;     - Repair unallocated directories &  files;     - Supports FAT12, FAT16 and FAT32.
Package: fathom (1.0+git.20190811.97fb5c-1)
Section: universe/games
Homepage: https://github.com/jdart1/Fathom
Depends: libc6 (>= 2.14), libfathom1 (>= 1.0)
Description:  Command-line for probing Syzygy tablebases Fathom is a stand-alone Syzygy tablebase probing tool. . The aims of Fathom are:  - To make it easy to integrate the Syzygy tablebases into existing chess engines.  - To make it easy to create stand-alone applications that use the Syzygy tablebases. . This package contains the command-line tool.
Package: fatrace (0.16.3-1)
Section: universe/utils
Homepage: https://github.com/martinpitt/fatrace
Depends: libc6 (>= 2.34)
Description:  report system wide file access events fatrace reports file access events from all running processes. Its  main  purpose  is to find processes which keep waking up the disk unnecessarily and thus prevent some power saving. . This package also contains a "power-usage-report" tool, which uses fatrace and powertop to build a textual report from one minute of measuring power usage and file accesses. This does not take any arguments or requires any interactivity, so is very simple to use and serves as a starting point for bug reports or optimizing a particular installation.
Package: fatresize (1.1.0-1)
Section: universe/otherosfs
Homepage: https://github.com/ya-mouse/fatresize
Depends: libc6 (>= 2.4), libparted-fs-resize0 (>= 3.1), libparted2 (>= 3.1)
Description:  FAT16/FAT32 filesystem resizer Fatresize is a command line tool for non-destructive resizing of FAT16/FAT32 partitions. . It is based on the GNU Parted library. The main target of the project is to be used with the EVMS FAT plugin.
Package: fatsort (1.6.3.622-0.1)
Section: universe/utils
Homepage: http://fatsort.sourceforge.net
Depends: libc6 (>= 2.14)
Description:  utility for sorting FAT directory structures FATSort is a utility that sorts FAT16 and FAT32 partitions. It even can handle long file name entries. It reads the boot sector and sorts the directory structure recursively. This is for example useful for sorting the files on your MP3 player when it doesn't implement a sorting function itself.
Package: faucc (20180503-1.1)
Section: universe/devel
Homepage: http://faumachine.potyra.de/
Depends: libc6 (>= 2.33), gcc
Description:  C compiler generating Intel code for 16bit/32bit CPUs FAUcc is a optimizing C compiler, that can generate Intel code for 16bit/32bit CPUS. It is useful, if you are in need to compile real mode code, like a BIOS. . FAUcc uses the GNU binutils for assembling/linking.
Package: fauhdlc (20180504-3.1build1)
Section: universe/devel
Homepage: http://faumachine.potyra.de/
Depends: libc6 (>= 2.29), libgc1 (>= 1:8.0), libgcc-s1 (>= 3.0), libstdc++6 (>= 9)
Description:  experimental VHDL compiler and interpreter Compiles a subset of VHDL 2000 to an intermediate language. The result can be simulated with an interpreter. . FAUhdlc is still in a very early experimental state, where many VHDL constructs are not yet properly supported.
Package: faultstat (0.01.07-1)
Section: universe/admin
Homepage: https://github.com/ColinIanKing/faultstat
Depends: libc6 (>= 2.34), libncursesw6 (>= 6), libtinfo6 (>= 6)
Description:  page fault monitoring tool Faultstat reports the page fault activity of processes running on a system. The tool supports a 'top' like mode to dynamically display the top page faulting processes.
Package: faust-common (2.37.3~ds0-1)
Section: universe/sound
Homepage: https://faust.grame.fr/
Description:  functional programming language for realtime audio applications - common files Faust is a functional programming language specifically designed for realtime audio applications and plugins. The syntax of the language is block diagram oriented. The faust compiler translate signal processing specifications into optimized C++ code for signal processing applications. . The generated code can be wrapped into an 'architecture file' in order to create for example a standalone jack/gtk application. Several architecture file are provided and additional ones are fairly easy to add. . This package contains the architecture independent files for faust.
Package: faust (2.37.3~ds0-1)
Section: universe/sound
Homepage: https://faust.grame.fr/
Depends: faust-common (<< 2.37.3~ds0+1~), faust-common (>= 2.37.3~ds0-1), libfaust2 (= 2.37.3~ds0-1), libc6 (>= 2.34), libgcc-s1 (>= 3.3.1), libllvm13, libsndfile1 (>= 1.0.20), libstdc++6 (>= 11)
Description:  functional programming language for realtime audio applications Faust is a functional programming language specifically designed for realtime audio applications and plugins. The syntax of the language is block diagram oriented. The faust compiler translate signal processing specifications into optimized C++ code for signal processing applications. . The generated code can be wrapped into an 'architecture file' in order to create for example a standalone jack/gtk application. Several architecture file are provided and additional ones are fairly easy to add.
Package: faustworks (0.5~repack0-6build1)
Section: universe/sound
Homepage: https://faust.grame.fr/
Depends: faust, libc6 (>= 2.29), libgcc-s1 (>= 3.0), libqt5core5a (>= 5.12.2), libqt5gui5 (>= 5.2.0) | libqt5gui5-gles (>= 5.2.0), libqt5svg5 (>= 5.6.0~beta), libqt5widgets5 (>= 5.2.0), libqt5xml5 (>= 5.0.2), libstdc++6 (>= 5)
Description:  IDE for Faust dsp programming language FaustWorks is an IDE (Integrated Development Environment) for the Faust dsp programming language. It relies on scripts to generate binaries for various audio targets. These scripts are located in /usr/share/FaustWorks/scripts.lin/
Package: fb-music-high (0.1.2+nmu1)
Section: universe/games
Homepage: http://www.frozen-bubble.org/
Description:  High quality, large music files for Frozen-Bubble Frozen-Bubble is a clone of the popular "Puzzle Bobble" game, featuring 100 single-player levels and a two-player mode. . This package contains high quality music for Frozen-Bubble. The 16-bit samples used sound better than the 8-bit ones in fb-music-low, but are about twice as large.
Package: fbautostart (2.718281828-1build2)
Section: universe/misc
Homepage: https://launchpad.net/fbautostart
Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2)
Description:  XDG compliant autostarting app for Fluxbox The fbautostart app was designed to have little to no overhead, while still maintaining the needed functionality of launching applications according to the XDG spec. . This package contains support for GNOME and KDE.
Package: fbb (7.010-3)
Section: universe/hamradio
Homepage: https://sourceforge.net/projects/linfbb/
Depends: libax25 (>= 0.0.12-rc5), libc6 (>= 2.34), libncurses6 (>= 6), libtinfo6 (>= 6)
Description:  Packet radio mailbox and utilities The fbb package contains software written by f6fbb for setting up a packet radio mailbox. It is intended for amateur radio operators. A short overview of some of the binaries: .  * fbb: Script to start the daemon.  * xfbbd: The daemon which listens for incoming connects.  * epurmess: Delete messages based on age.  * epurwp: White Pages maintenance.  * reqdir: FBB server which requests directory listings.  * xfbbC: B/W Ncurses console for xfbbd.
Package: fbcat (0.5.1-1)
Section: universe/graphics
Homepage: https://jwilk.net/software/fbcat
Depends: libc6 (>= 2.4)
Description:  framebuffer grabber fbcat grabs a screenshot of a framebuffer and stores in a PPM file. . This package also provides a compatibility wrapper around fbcat to ease migration from fbgrab.
Package: fbi (2.10-4ubuntu1)
Section: universe/graphics
Homepage: https://www.kraxel.org/blog/linux/fbida/
Depends: libc6 (>= 2.14), libexif12 (>= 0.6.21-1~), libfontconfig1 (>= 2.12.6), libfreetype6 (>= 2.2.1), libgif7 (>= 5.1), libjpeg8 (>= 8c), libpng16-16 (>= 1.6.2-1), libtiff5 (>= 4.0.3)
Description:  Linux frame buffer image viewer This is an image viewer for Linux frame buffer devices.  It has built-in support for a number of common image file formats.  For unknown files, it tries to use convert from the ImageMagick package as an external converter. It also includes fbgs, a Postscript and PDF viewer.
Package: fbless (0.2.3-5)
Section: universe/text
Depends: python3-xdg, hyphen-de (>= 1:7.1.0~rc3), hyphen-en-us (>= 2.8.8), hyphen-es (>= 1:7.1.0~rc3), hyphen-fr (>= 1:7.1.0~rc3), hyphen-it (>= 1:7.1.0~rc3), hyphen-ru (>= 20030310), hyphen-uk (>= 1:7.1.0~rc3), python3:any
Description:  terminal fiction book reader Fbreader is ncurses fiction book (.fb2) reader with following features: .  * customizable color themes  * last viewed point saving  * autoscroll mode  * support for archived books  * basic links support
Package: fbpager (0.1.5~git20090221.1.8e0927e6-3)
Section: universe/x11
Homepage: https://github.com/fluxbox/fbpager
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.3.1), libstdc++6 (>= 5.2), libx11-6, libxrender1
Description:  pager application for the Fluxbox window manager fbpager is a pager for Fluxbox with support of the following features: .   - mouse gestures with button binding   - great number of configuration items   - alpha channel transparency   - ability to reside in the slit
Package: fbpanel (7.0-4.2build1)
Section: universe/x11
Homepage: https://github.com/aanatoly/fbpanel
Depends: libc6 (>= 2.33), libgdk-pixbuf-2.0-0 (>= 2.22.0), libglib2.0-0 (>= 2.24.0), libgtk2.0-0 (>= 2.24.0), libx11-6, librsvg2-common
Description:  lightweight X11 desktop panel FBPanel is a spinoff of the fspanel (f***ing small panel) with more eye candy. It provides a taskbar (list of all opened windows), desktop switcher, launchbar, clock, is EWMH/NETWM compliant, and has modest resource usage.
Package: fbreader (0.12.10dfsg2-6)
Section: universe/text
Homepage: http://www.fbreader.org/
Depends: libc6 (>= 2.34), libsqlite3-0 (>= 3.5.9), libstdc++6 (>= 11), libzlcore0.13, libzltext0.13, libzlui-gtk (>= 0.12.10dfsg2-6)
Description:  e-book reader FBReader is an e-book reader. . Main features:  * supports several open e-book formats: fb2, html, chm, plucker,    palmdoc, ztxt, tcr (psion text), rtf, oeb, openreader, non-DRM'ed    mobipocket, plain text, epub, eReader  * reads directly from tar, zip, gzip, bzip2 archives (you can have    several books in one archive)  * supports a structured view of your e-book collection  * automatically determines encodings  * automatically generates a table of contents  * keeps the last open book and the last read positions for all open books    between runs  * automatic hyphenation (patterns for several languages are included)  * searching and downloading books from www.feedbooks.com and www.litres.ru  * partial CSS support for epub files
Package: fbset (2.1-32build3)
Section: admin
Homepage: http://users.telenet.be/geertu/Linux/fbdev/
Depends: libc6 (>= 2.34), udev | makedev (>= 2.3.1-24)
Description:  framebuffer device maintenance program Program to modify settings for the framebuffer devices (/dev/fb[0-9]* or /dev/fb/[0-9]*) on Linux, like depth, virtual resolution, timing parameters etc.
Package: fbterm-ucimf (0.2.9-5build1)
Section: universe/utils
Homepage: https://github.com/matlinuxer2/ucimf
Depends: fbterm, ucimf, libc6 (>= 2.14), libucimf0
Description:  ucimf input method interface for fbterm This package contains an input method interface for fbterm using ucimf, the Linux Unicode framebuffer console input method framework.
Package: fbterm (1.7-5)
Section: universe/utils
Homepage: https://code.google.com/archive/p/fbterm/
Depends: libc6 (>= 2.15), libfontconfig1 (>= 2.12.6), libfreetype6 (>= 2.2.1), libstdc++6 (>= 5), libx86-1 (>= 1.1+ds1)
Description:  fast framebuffer based terminal emulator for Linux FbTerm is a fast terminal emulator for Linux with frame buffer device. . Features include:  * mostly as fast as terminal of Linux kernel while accelerated scrolling is    enabled on framebuffer device  * select font with fontconfig and draw text with freetype2, same as Qt/Gtk+    based GUI apps  * dynamicly create/destroy up to 10 windows initially running default shell  * record scrollback history for every window  * auto-detect current locale and convert text encoding, support double width    scripts like Chinese, Japanese etc  * switch between configurable additional text encoding with hot keys    on the fly  * copy/past selected text between windows with mouse when gpm server is    running
Package: fbtv (3.107-1.1)
Section: universe/graphics
Homepage: https://www.linuxtv.org/wiki/index.php/Xawtv
Depends: v4l-conf, xawtv-plugins (= 3.107-1.1), libasound2 (>= 1.0.16), libc6 (>= 2.34), libjpeg8 (>= 8c), liblirc-client0, libncursesw6 (>= 6), libtinfo6 (>= 6)
Description:  television viewer - Linux framebuffer application XawTV is a set of software for watching and recording television channels and webcams. . FbTV is a Linux framebuffer application which displays television channels. It supports video4linux devices and requires a framebuffer device (vesafb, matroxfb, atyfb, etc.).
Package: fbx-all (2build1)
Section: universe/metapackages
Homepage: https://freedombox.org
Depends: fbx-tasks (= 2build1), freedombox
Description:  FreedomBox package This metapackage will install the FreedomBox service and web interface which can be used to install and manage all other FreedomBox apps.
Package: fbx-tasks (2build1)
Section: universe/misc
Homepage: https://freedombox.org
Depends: tasksel
Description:  FreedomBox tasks for tasksel FreedomBox is designed to be your own inexpensive server at home. It runs free software and offers an increasing number of services ranging from a calendar or jabber server to a wiki or VPN. A web interface allows you to easily install and configure your apps. . This package provides FreedomBox tasks in tasksel.
Package: fbxkb (0.6-3)
Section: universe/x11
Homepage: http://fbxkb.sourceforge.net
Depends: libc6 (>= 2.7), libgdk-pixbuf-2.0-0 (>= 2.22.0), libglib2.0-0 (>= 2.16.0), libgtk2.0-0 (>= 2.24.0), libx11-6
Description:  X11 keyboard indicator and switcher It shows a flag of current keyboard in a systray area and allows you to switch to another one. It's written in C and uses the GTK+2.4 library only (no GNOME is needed).