k3ylabs/cosoco-image-dataset huggingface dataset:
Package: libfreecontact-dev (1.0.21-12)
Section: universe/libdevel
Homepage: https://rostlab.org/
Depends: libfreecontact0v5 (= 1.0.21-12)
Description:  fast protein contact predictor library - development files FreeContact is a protein residue contact predictor optimized for speed. Its input is a multiple sequence alignment. FreeContact can function as an accelerated drop-in for the published contact predictors EVfold-mfDCA of DS. Marks (2011) and PSICOV of D. Jones (2011). . FreeContact is accelerated by a combination of vector instructions, multiple threads, and faster implementation of key parts. Depending on the alignment, 8-fold or higher speedups are possible. . A sufficiently large alignment is required for meaningful results. As a minimum, an alignment with an effective (after-weighting) sequence count bigger than the length of the query sequence should be used. Alignments with tens of thousands of (effective) sequences are considered good input. . jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite can be used to generate the alignments, for example. . This package contains files necessary for developing applications with libfreecontact.
Package: libfreecontact-doc (1.0.21-12)
Section: universe/doc
Homepage: https://rostlab.org/
Depends: libjs-jquery
Description:  documentation for libfreecontact FreeContact is a protein residue contact predictor optimized for speed. Its input is a multiple sequence alignment. FreeContact can function as an accelerated drop-in for the published contact predictors EVfold-mfDCA of DS. Marks (2011) and PSICOV of D. Jones (2011). . FreeContact is accelerated by a combination of vector instructions, multiple threads, and faster implementation of key parts. Depending on the alignment, 8-fold or higher speedups are possible. . A sufficiently large alignment is required for meaningful results. As a minimum, an alignment with an effective (after-weighting) sequence count bigger than the length of the query sequence should be used. Alignments with tens of thousands of (effective) sequences are considered good input. . jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite can be used to generate the alignments, for example. . This package contains HTML documentation for libfreecontact.
Package: libfreecontact-perl (0.08-9build1)
Section: universe/perl
Homepage: https://rostlab.org/owiki/index.php/FreeContact
Depends: libc6 (>= 2.34), libfreecontact0v5 (>= 1.0.21), libgcc-s1 (>= 3.3.1), perl, perlapi-5.34.0
Description:  fast protein contact predictor - binding for Perl FreeContact is a protein residue contact predictor optimized for speed. Its input is a multiple sequence alignment. FreeContact can function as an accelerated drop-in for the published contact predictors EVfold-mfDCA of DS. Marks (2011) and PSICOV of D. Jones (2011). . FreeContact is accelerated by a combination of vector instructions, multiple threads, and faster implementation of key parts. Depending on the alignment, 8-fold or higher speedups are possible. . A sufficiently large alignment is required for meaningful results. As a minimum, an alignment with an effective (after-weighting) sequence count bigger than the length of the query sequence should be used. Alignments with tens of thousands of (effective) sequences are considered good input. . jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite can be used to generate the alignments, for example. . This package contains the Perl binding.
Package: libfreecontact0v5 (1.0.21-12)
Section: universe/libs
Homepage: https://rostlab.org/
Depends: libblas3 | libblas.so.3, libc6 (>= 2.34), libgcc-s1 (>= 3.3.1), libgfortran5 (>= 8), libgomp1 (>= 6), liblapack3 | liblapack.so.3, libstdc++6 (>= 11)
Description:  fast protein contact predictor library FreeContact is a protein residue contact predictor optimized for speed. Its input is a multiple sequence alignment. FreeContact can function as an accelerated drop-in for the published contact predictors EVfold-mfDCA of DS. Marks (2011) and PSICOV of D. Jones (2011). . FreeContact is accelerated by a combination of vector instructions, multiple threads, and faster implementation of key parts. Depending on the alignment, 8-fold or higher speedups are possible. . A sufficiently large alignment is required for meaningful results. As a minimum, an alignment with an effective (after-weighting) sequence count bigger than the length of the query sequence should be used. Alignments with tens of thousands of (effective) sequences are considered good input. . jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite can be used to generate the alignments, for example. . This package contains the shared library implementing freecontact.
Package: libfreediameter-dev (1.2.1-8build1)
Section: universe/libdevel
Homepage: http://www.freediameter.net/trac/
Depends: libfdcore6 (= 1.2.1-8build1), libfdproto6 (= 1.2.1-8build1), libgnutls28-dev, libgcrypt20-dev, libidn11-dev, libsctp-dev
Description:  Library for the Diameter protocol (development files) Diameter is a protocol designed to carry Authentication, Authorization and Accounting (AAA) payload. It is an evolution of the RADIUS protocol (as the name suggests). . freeDiameter is an implementation of the Diameter protocol. . This shared library contains the development files for libfdcoreX and libfdprotoX
Package: libfreefare-bin (0.4.0-2.1build1)
Section: universe/utils
Homepage: https://code.google.com/p/libfreefare/
Depends: libc6 (>= 2.34), libfreefare0 (>= 0.4.0-2.1build1), libnfc6 (>= 1.7.0~rc7)
Description:  MIFARE card manipulations binaries The libfreefare project aims to provide a convenient API for MIFARE card manipulations. . This package includes some binaries that are useful for development purposes.
Package: libfreefare-dev (0.4.0-2.1build1)
Section: universe/libdevel
Homepage: https://code.google.com/p/libfreefare/
Depends: libfreefare0 (= 0.4.0-2.1build1), libnfc-dev
Description:  MIFARE card manipulations library (development files) The libfreefare project aims to provide a convenient API for MIFARE card manipulations. . This package contains development files.
Package: libfreefare-doc (0.4.0-2.1build1)
Section: universe/doc
Homepage: https://code.google.com/p/libfreefare/
Description:  documentation for libfreefare The libfreefare project aims to provide a convenient API for MIFARE card manipulations. . This package contains document files.
Package: libfreefare0 (0.4.0-2.1build1)
Section: universe/libs
Homepage: https://code.google.com/p/libfreefare/
Depends: libc6 (>= 2.14), libnfc6 (>= 1.7.0~rc7), libssl3 (>= 3.0.0~~alpha1)
Description:  MIFARE card manipulations library The libfreefare project aims to provide a convenient API for MIFARE card manipulations. . This package contains the libfreefare library.
Package: libfreefem++-dev (4.9+dfsg1-2build1)
Section: universe/libdevel
Homepage: http://www.freefem.org/ff++/
Depends: libfreefem++
Description:  Provides the development files of the FreeFem++ FE suite FreeFem++ is an implementation of a language dedicated to the finite element method. It enables you to solve Partial Differential Equations (PDE) easily. . Problems involving PDE from several branches of physics such as fluid-structure interactions require interpolations of data on several meshes and their manipulation within one program. FreeFem++ includes a fast quadtree-based interpolation algorithm and a language for the manipulation of these data on multiple meshes. It contains also a powerful mesh generation and adaption tool integrated seamlessly in FreeFem++ called bamg. . FreeFem++ is written in C++ and the FreeFem++ language is a C++ idiom allowing for a smooth learning curve. . This package contains the development files of FreeFem++.
Package: libfreefem++ (4.9+dfsg1-2build1)
Section: universe/libs
Homepage: http://www.freefem.org/ff++/
Depends: coinor-libipopt1v5, libblas3 | libblas.so.3, libc6 (>= 2.33), libcholmod3 (>= 1:4.5.2), libfftw3-double3 (>= 3.3.5), libgcc-s1 (>= 4.0), libgfortran5 (>= 8), libgsl27 (>= 2.7.1), liblapack3 | liblapack.so.3, libmetis5 (>= 5.1.0.dfsg), libmumps-seq-5.4 (>= 5.4.1), libopenmpi3 (>= 4.1.0), libptscotch-6.1 (>= 6.1.1), libstdc++6 (>= 11), libsuperlu5 (>= 5.3.0+dfsg1), libtet1.5, libumfpack5 (>= 1:4.5.2)
Description:  Provides the shared libraries of the FreeFem++ FE suite FreeFem++ is an implementation of a language dedicated to the finite element method. It enables you to solve Partial Differential Equations (PDE) easily. . Problems involving PDE from several branches of physics such as fluid-structure interactions require interpolations of data on several meshes and their manipulation within one program. FreeFem++ includes a fast quadtree-based interpolation algorithm and a language for the manipulation of these data on multiple meshes. It contains also a powerful mesh generation and adaption tool integrated seamlessly in FreeFem++ called bamg. . FreeFem++ is written in C++ and the FreeFem++ language is a C++ idiom allowing for a smooth learning curve. . This package contains the shared libraries of FreeFem++.
Package: libfreefem-dev (3.5.8-7build1)
Section: universe/libdevel
Homepage: http://kfem.sourceforge.net
Depends: libfreefem0 (= 3.5.8-7build1)
Description:  Development library, header files and manpages FreeFEM is a language adapted to Partial Differential equation. The underlying method used  is the Finite Element Method. This tool has been successfully used as a teaching tool and even as a research tool.
Package: libfreefem-doc (3.5.8-7build1)
Section: universe/doc
Homepage: http://kfem.sourceforge.net
Description:  Documentation for FreeFEM development FreeFEM is a language adapted to Partial Differential equation. The underlying method used  is the Finite Element Method. This tool has been successfully used as a teaching tool and even as a research tool.
Package: libfreefem0 (3.5.8-7build1)
Section: universe/libs
Homepage: http://kfem.sourceforge.net
Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.0), libstdc++6 (>= 5), libx11-6
Description:  Shared libraries for FreeFEM FreeFEM is a language adapted to Partial Differential equation. The underlying method used  is the Finite Element Method. This tool has been successfully used as a teaching tool and even as a research tool.
Package: libfreehand-0.1-1 (0.1.2-3build2)
Section: libs
Homepage: http://freedesktop.org/wiki/Software/libfreehand
Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.3.1), liblcms2-2 (>= 2.2+git20110628), librevenge-0.0-0, libstdc++6 (>= 11), zlib1g (>= 1:1.1.4)
Description:  Library for parsing the FreeHand file format structure Libfreehand is library providing ability to interpret and import Adobe/Macromedia drawings into various applications.
Package: libfreehand-dev (0.1.2-3build2)
Section: libdevel
Homepage: http://freedesktop.org/wiki/Software/libfreehand
Depends: libfreehand-0.1-1 (= 0.1.2-3build2), librevenge-dev
Description:  Library for parsing the FreeHand file format structure -- development Libfreehand is library providing ability to interpret and import Adobe/Macromedia drawings into various applications. . This package contains the development files (headers, ...)
Package: libfreehep-chartableconverter-plugin-java (2.0-10)
Section: universe/java
Homepage: http://java.freehep.org/
Depends: libmaven3-core-java (>= 3.5.0), libplexus-compiler-java (>= 2.8.2)
Description:  FreeHEP Character Table Converter This maven plugin converts 16 bit Unicode text files into lookup tables. These tables are used by the VectorGraphics package (part of the FreeHEP project) to include and embed fonts in the output formats. . FreeHEP is a collection of Java libraries used in High Energy Physics.
Package: libfreehep-export-java (2.1.1-4)
Section: universe/java
Homepage: http://java.freehep.org/
Depends: libfreehep-swing-java
Description:  FreeHEP Export and Save As Library Library to register filetypes (which can be loaded as plugin modules). This library is used by VectorGraphics libraries to implement a modular import/export system for image files: importers or exporters for different formats can be deloped or loaded independently. . FreeHEP is a collection of Java libraries used in High Energy Physics.
Package: libfreehep-graphics2d-java (2.4+dfsg-3)
Section: universe/java
Homepage: https://freehep.github.com/freehep-vectorgraphics/
Depends: junit4 (>= 4.12), libfreehep-io-java
Description:  FreeHEP 2D Graphics Library The Vector Graphics package of the FreeHEP Java Library enables any Java program to export to a variety of vector graphics formats as well as bitmap image formats. Among the vector formats are Encapsulated PostScript (EPS), Portable Document Format (PDF), Enhanced Meta Format (EMF), Scalable Vector Graphics (SVG), and Flash (SWF), while the image formats include GIF, PNG, JPG and PPM. . This package contains the FreeHEP 2D Graphics Library.
Package: libfreehep-graphicsbase-java (2.4+dfsg-3)
Section: universe/java
Homepage: https://freehep.github.com/freehep-vectorgraphics/
Description:  FreeHEP Graphics Base Library The Vector Graphics package of the FreeHEP Java Library enables any Java program to export to a variety of vector graphics formats as well as bitmap image formats. Among the vector formats are Encapsulated PostScript (EPS), Portable Document Format (PDF), Enhanced Meta Format (EMF), Scalable Vector Graphics (SVG), and Flash (SWF), while the image formats include GIF, PNG, JPG and PPM. . This package contains the FreeHEP Graphics Base Library.
Package: libfreehep-graphicsio-emf-java (2.4+dfsg-3)
Section: universe/java
Homepage: https://freehep.github.com/freehep-vectorgraphics/
Description:  FreeHEP Enhanced Metafile Format Driver The Vector Graphics package of the FreeHEP Java Library enables any Java program to export to a variety of vector graphics formats as well as bitmap image formats. Among the vector formats are Encapsulated PostScript (EPS), Portable Document Format (PDF), Enhanced Meta Format (EMF), Scalable Vector Graphics (SVG), and Flash (SWF), while the image formats include GIF, PNG, JPG and PPM. . This package contains a GraphicsIO plugin to export to Enhanced Metafile Format.
Package: libfreehep-graphicsio-java-java (2.4+dfsg-3)
Section: universe/java
Homepage: https://freehep.github.com/freehep-vectorgraphics/
Description:  FreeHEP Java Driver The Vector Graphics package of the FreeHEP Java Library enables any Java program to export to a variety of vector graphics formats as well as bitmap image formats. Among the vector formats are Encapsulated PostScript (EPS), Portable Document Format (PDF), Enhanced Meta Format (EMF), Scalable Vector Graphics (SVG), and Flash (SWF), while the image formats include GIF, PNG, JPG and PPM. . This package contains a GraphicsIO plugin to export the java calls made to Graphics2D as source code, with the associated class, field and method definitions, resulting in a class which, when run will produce the same display. Generating such source code may be helpful in setting up test cases without a lot of machinery around it and in debugging problems for different formats.
Package: libfreehep-graphicsio-java (2.4+dfsg-3)
Section: universe/java
Homepage: https://freehep.github.com/freehep-vectorgraphics/
Description:  FreeHEP GraphicsIO Base Library The Vector Graphics package of the FreeHEP Java Library enables any Java program to export to a variety of vector graphics formats as well as bitmap image formats. Among the vector formats are Encapsulated PostScript (EPS), Portable Document Format (PDF), Enhanced Meta Format (EMF), Scalable Vector Graphics (SVG), and Flash (SWF), while the image formats include GIF, PNG, JPG and PPM. . This package contains the FreeHEP GraphicsIO Base Library.
Package: libfreehep-graphicsio-pdf-java (2.4+dfsg-3)
Section: universe/java
Homepage: https://freehep.github.com/freehep-vectorgraphics/
Description:  FreeHEP Portable Document Format Driver The Vector Graphics package of the FreeHEP Java Library enables any Java program to export to a variety of vector graphics formats as well as bitmap image formats. Among the vector formats are Encapsulated PostScript (EPS), Portable Document Format (PDF), Enhanced Meta Format (EMF), Scalable Vector Graphics (SVG), and Flash (SWF), while the image formats include GIF, PNG, JPG and PPM. . This package contains a GraphicsIO plugin to export to Portable Document Format.
Package: libfreehep-graphicsio-ps-java (2.4+dfsg-3)
Section: universe/java
Homepage: https://freehep.github.com/freehep-vectorgraphics/
Description:  FreeHEP (Encapsulated) PostScript Driver The Vector Graphics package of the FreeHEP Java Library enables any Java program to export to a variety of vector graphics formats as well as bitmap image formats. Among the vector formats are Encapsulated PostScript (EPS), Portable Document Format (PDF), Enhanced Meta Format (EMF), Scalable Vector Graphics (SVG), and Flash (SWF), while the image formats include GIF, PNG, JPG and PPM. . This package contains a GraphicsIO plugin to export to PostScript format.
Package: libfreehep-graphicsio-svg-java (2.4+dfsg-3)
Section: universe/java
Homepage: https://freehep.github.com/freehep-vectorgraphics/
Description:  FreeHEP Scalable Vector Graphics Driver The Vector Graphics package of the FreeHEP Java Library enables any Java program to export to a variety of vector graphics formats as well as bitmap image formats. Among the vector formats are Encapsulated PostScript (EPS), Portable Document Format (PDF), Enhanced Meta Format (EMF), Scalable Vector Graphics (SVG), and Flash (SWF), while the image formats include GIF, PNG, JPG and PPM. . This package contains a GraphicsIO plugin to export to SVG format.
Package: libfreehep-graphicsio-swf-java (2.4+dfsg-3)
Section: universe/java
Homepage: https://freehep.github.com/freehep-vectorgraphics/
Description:  FreeHEP SWF (Flash) Driver The Vector Graphics package of the FreeHEP Java Library enables any Java program to export to a variety of vector graphics formats as well as bitmap image formats. Among the vector formats are Encapsulated PostScript (EPS), Portable Document Format (PDF), Enhanced Meta Format (EMF), Scalable Vector Graphics (SVG), and Flash (SWF), while the image formats include GIF, PNG, JPG and PPM. . This package contains a GraphicsIO plugin to export to SWF (Flash) format.
Package: libfreehep-graphicsio-tests-java (2.4+dfsg-3)
Section: universe/java
Homepage: https://freehep.github.com/freehep-vectorgraphics/
Description:  FreeHEP GraphicsIO Test Library The Vector Graphics package of the FreeHEP Java Library enables any Java program to export to a variety of vector graphics formats as well as bitmap image formats. Among the vector formats are Encapsulated PostScript (EPS), Portable Document Format (PDF), Enhanced Meta Format (EMF), Scalable Vector Graphics (SVG), and Flash (SWF), while the image formats include GIF, PNG, JPG and PPM. . This package contains a series of tests used within GraphicsIO or its plugins.
Package: libfreehep-io-java (2.0.2-6)
Section: universe/java
Homepage: http://java.freehep.org/
Depends: junit (>= 3.8.2)
Description:  FreeHEP I/O library This library offers a collection of utility subclasses of standard IO Java classes (such as InputStrem, OutputStream, Reader and Writer), which help in dealing with encodings, byte order, tagged streams or other common IO-related issues. It is mainly used by other libraries within the FreeHEP project. . FreeHEP is a collection of Java libraries used in High Energy Physics.
Package: libfreehep-swing-java (2.0.3-5)
Section: universe/java
Homepage: http://java.freehep.org/
Depends: junit (>= 3.8.2), libfreehep-util-java
Description:  FreeHEP swing extensions This library contains a collection of utility classes built on top of the Java Swing framework. It contains new Swing elements, extensions of other elements already in Swing and other wrapper classes used to facilitate the use of the Swing library. It is mainly used by other libraries within the FreeHEP project. . FreeHEP is a collection of Java libraries used in High Energy Physics.
Package: libfreehep-util-java (2.0.2-7)
Section: universe/java
Homepage: http://java.freehep.org/
Depends: libnb-org-openide-util-java
Description:  FreeHEP utility library This library contains miscellaneous utility classes used in other FreeHEP components, such as classes dealing with physical errors and scientific notation, assertions, hash tables, option parsers and others. . FreeHEP is a collection of Java libraries used in High Energy Physics.
Package: libfreehep-xml-java (2.1.2+dfsg1-5)
Section: universe/java
Homepage: http://java.freehep.org/
Depends: junit (>= 3.8.2), libfreehep-io-java, libfreehep-swing-java, libfreehep-util-java, libjdom1-java (>= 1.1.3)
Description:  FreeHEP XML Library This library provides tools to read and write XML and XHTML files. You can write XML and XHTML files using a Writer-like interface, with additional methods to add tags and attributes, or save and restore on object configuration with XML. . FreeHEP is a collection of Java libraries used in High Energy Physics.
Package: libfreeimage-dev (3.18.0+ds2-6ubuntu5.1)
Section: universe/libdevel
Homepage: http://freeimage.sourceforge.net/
Depends: libfreeimage3 (= 3.18.0+ds2-6ubuntu5.1)
Description:  Support library for graphics image formats (development files) FreeImage is an Open Source C/C++ library project for developers who would like to support popular graphics image formats like PNG, BMP, JPEG, TIFF and others as needed by today's multimedia applications. FreeImage is easy to use, fast, multithreading safe, and cross-platform (works both with Linux, 32 bit Windows and Mac OS X). . This package contains the headers and static libraries needed to develop programs using FreeImage.
Package: libfreeimage3 (3.18.0+ds2-6ubuntu5.1)
Section: universe/libs
Homepage: http://freeimage.sourceforge.net/
Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.3.1), libilmbase25 (>= 2.5.7), libjpeg8 (>= 8c), libjxr0 (>= 1.0), libopenexr25 (>= 2.5.7), libopenjp2-7 (>= 2.0.0), libpng16-16 (>= 1.6.2-1), libraw20 (>= 0.16.0), libstdc++6 (>= 11), libtiff5 (>= 4.0.3), libwebp7, libwebpmux3, zlib1g (>= 1:1.1.4)
Description:  Support library for graphics image formats (library) FreeImage is an Open Source C/C++ library project for developers who would like to support popular graphics image formats like PNG, BMP, JPEG, TIFF and others as needed by today's multimedia applications. FreeImage is easy to use, fast, multithreading safe, and cross-platform (works both with Linux, 32 bit Windows and Mac OS X). . This package contains the FreeImage library.
Package: libfreeimageplus-dev (3.18.0+ds2-6ubuntu5.1)
Section: universe/libdevel
Homepage: http://freeimage.sourceforge.net/
Depends: libfreeimage-dev (>= 3.17.0+ds1-1~exp2), libfreeimageplus3 (= 3.18.0+ds2-6ubuntu5.1)
Description:  C++ wrappers for FreeImage (development files) FreeImage is an Open Source C/C++ library project for developers who would like to support popular graphics image formats like PNG, BMP, JPEG, TIFF and others as needed by today's multimedia applications. FreeImage is easy to use, fast, multithreading safe, and cross-platform (works both with Linux, 32 bit Windows and Mac OS X). . This package contains the headers and static libraries needed to develop programs using FreeImagePlus.
Package: libfreeimageplus-doc (3.18.0+ds2-6ubuntu5.1)
Section: universe/doc
Homepage: http://freeimage.sourceforge.net/
Depends: libjs-jquery
Description:  C++ wrappers for FreeImage (documentation) FreeImage is an Open Source C/C++ library project for developers who would like to support popular graphics image formats like PNG, BMP, JPEG, TIFF and others as needed by today's multimedia applications. FreeImage is easy to use, fast, multithreading safe, and cross-platform (works both with Linux, 32 bit Windows and Mac OS X). . This package contains the documentation for FreeImagePlus.