julilili42/papers huggingface dataset:
Cosmic-ray spectrum in the local Galaxy
2017-08-22

We study the spectral properties of the cosmic-ray spectrum in the\\ninterstellar medium within 1 kpc distance from the Sun. We used eight-year\\nexposure data of molecular clouds of the Gould Belt obtained with the Fermi/LAT\\ntelescope to precisely measure the cosmic-ray spectrum at different locations\\nin the local Galaxy. We compared this measurement with the direct measurements\\nof the cosmic-ray flux in and around the solar system obtained by Voyager and\\nAMS-02 or PAMELA. We find that the average cosmic-ray spectrum in the local\\nGalaxy in the 1-100 GeV range is well described by a broken power-law in\\nrigidity with a low-energy slope of and a break at\\n GV, with a slope change by . This result is\\nconsistent with an earlier analysis of the gamma-ray signal from the Gould Belt\\nclouds based on a shorter exposure of Fermi/LAT and with a different event\\nselection. The break at 10-20 GV is also consistent with the combined Voyager +\\nAMS-02 measurements in/around the solar system. The slope of the spectrum below\\nthe break agrees with the slope of the average cosmic-ray spectrum in the inner\\npart of the disk of the Milky Way that was previously derived from the\\nFermi/LAT gamma-ray data. We conjecture that it is this slope of 2.33 and not\\nthe locally measured softer slope of 2.7-2.8 that is determined by the balance\\nbetween a steady-state injection of cosmic rays with a power-law slope of 2-2.1\\nthat is due to Fermi acceleration and the energy-dependent propagation of\\ncosmic-ray particles through the turbulent interstellar magnetic field with a\\nKolmogorov turbulence spectrum. The approximation of a continuous-in-time\\ninjection of cosmic rays at a constant rate breaks down, which causes the\\nsoftening of the spectrum at higher energies.\\n
The C32 alkane-1,15-diol as a proxy of late Quaternary riverine input in coastal margins
2017-08-22

Abstract. The study of past sedimentary records from coastal margins allows us to reconstruct variations in terrestrial input into the marine realm and to gain insight into continental climatic variability. There are numerous organic proxies for tracing terrestrial input into marine environments but none that strictly reflect the input of river-produced organic matter. Here, we test the fractional abundance of the C32 alkane 1,15-diol relative to all 1,13- and 1,15-long-chain diols (FC32 1, 15) as a tracer of input of river-produced organic matter in the marine realm in surface and Quaternary (0–45 ka) sediments on the shelf off the Zambezi and nearby smaller rivers in the Mozambique Channel (western Indian Ocean). A Quaternary (0–22 ka) sediment record off the Nile River mouth in the eastern Mediterranean was also studied for long-chain diols. For the Mozambique Channel, surface sediments of sites most proximal to Mozambique rivers showed the highest F1, 15 − C32 (up to 10 %). The sedimentary record shows high (15–35 %) pre-Holocene F1, 15 − C32 and low (&lt; 10 %) Holocene F1, 15 − C32 values, with a major decrease between 18 and 12 ka. F1, 15 − C32 is significantly correlated (r2 = 0.83, p &lt; 0.001) with the branched and isoprenoid tetraether (BIT) index, a proxy for the input of soil and river-produced organic matter in the marine environment, which declines from 0.25 to 0.60 for the pre-Holocene to &lt; 0.10 for the Holocene. This decrease in both FC32 1, 15 and the BIT is interpreted to be mainly due to rising sea level, which caused the Zambezi River mouth to become more distal to our study site, thereby decreasing riverine input at the core location. Some small discrepancies are observed between the records of the BIT index and FC32 1, 15 for Heinrich Event 1 (H1) and the Younger Dryas (YD), which may be explained by a change in soil sources in the catchment area rather than a change in river influx. Like for the Mozambique Channel, a significant correlation between FC32 1, 15 and the BIT index (r2 = 0.38, p &lt; 0.001) is observed for the eastern Mediterranean Nile record. Here also, the BIT index and FC32 1, 15 are lower in the Holocene than in the pre-Holocene, which is likely due to the sea level rise. In general, the differences between the BIT index and FC32 1, 15 eastern Mediterranean Nile records can be explained by the fact that the BIT index is not only affected by riverine runoff but also by vegetation cover with increasing cover leading to lower soil erosion. Our results confirm that FC32 1, 15 is a complementary proxy for tracing riverine input of organic matter into marine shelf settings, and, in comparison with other proxies, it seems not to be affected by soil and vegetation changes in the catchment area.
Bodily Reactions to Emotional Words Referring to Own versus Other People’s Emotions
2017-08-22

According to embodiment theories, language and emotion affect each other. In line with this, several previous studies investigated changes in bodily responses including facial expressions, heart rate or skin conductance during affective evaluation of emotional words and sentences. This study investigates the embodiment of emotional word processing from a social perspective by experimentally manipulating the emotional valence of a word and its personal reference. Stimuli consisted of pronoun-noun pairs, i.e., positive, negative, and neutral nouns paired with possessive pronouns of the first or the third person ("my," "his") or the non-referential negation term ("no") as controls. Participants had to quickly evaluate the word pairs by key presses as either positive, negative, or neutral, depending on the subjective feelings they elicit. Hereafter, they elaborated the intensity of the feeling on a non-verbal scale from 1 (very unpleasant) to 9 (very pleasant). Facial expressions (<i>M. Zygomaticus</i>, <i>M. Corrugator</i>), heart rate, and, for exploratory purposes, skin conductance were recorded continuously during the spontaneous and elaborate evaluation tasks. Positive pronoun-noun phrases were responded to the quickest and judged more often as positive when they were self-related, i.e., related to the reader's self (e.g., "my happiness," "my joy") than when related to the self of a virtual other (e.g., "his happiness," "his joy"), suggesting a self-positivity bias in the emotional evaluation of word stimuli. Physiologically, evaluation of emotional, unlike neutral pronoun-noun pairs initially elicited an increase in mean heart rate irrespective of stimulus reference. Changes in facial muscle activity, <i>M. Zygomaticus</i> in particular, were most pronounced during spontaneous evaluation of positive other-related pronoun-noun phrases in line with theoretical assumptions that facial expressions are socially embedded even in situation where no real communication partner is present. Taken together, the present results confirm and extend the embodiment hypothesis of language by showing that bodily signals can be differently pronounced during emotional evaluation of self- and other-related emotional words.
Cognitive Mechanisms Underlying Directional and Non-directional Spatial-Numerical Associations across the Lifespan
2017-08-22

There is accumulating evidence suggesting an association of numbers with physical space. However, the origin of such spatial-numerical associations (SNAs) is still debated. In the present study we investigated the development of two SNAs in a cross-sectional study involving children, young and middle-aged adults as well as the elderly: (1) the SNARC (spatial-numerical association of response codes) effect, reflecting a directional SNA; and (2) the numerical bisection bias in a line bisection task with numerical flankers. Results revealed a consistent SNARC effect in all age groups that continuously increased with age. In contrast, a numerical bisection bias was only observed for children and elderly participants, implying an U-shaped distribution of this bias across age groups. Additionally, individual SNARC effects and numerical bisection biases did not correlate significantly. We argue that the SNARC effect seems to be influenced by longer-lasting experiences of cultural constraints such as reading and writing direction and may thus reflect embodied representations. Contrarily, the numerical bisection bias may originate from insufficient inhibition of the semantic influence of irrelevant numerical flankers, which should be more pronounced in children and elderly people due to development and decline of cognitive control, respectively. As there is an ongoing debate on the origins of SNAs in general and the SNARC effect in particular, the present results are discussed in light of these differing accounts in an integrative approach. However, taken together, the present pattern of results suggests that different cognitive mechanisms underlie the SNARC effect and the numerical bisection bias.
A new species ofVaranus(Anguimorpha: Varanidae) from the early Miocene of the Czech Republic, and its relationships and palaeoecology
2017-08-22

Skeletal remains of a new early Miocene (Ottnangian, MN 4 mammal zone) monitor lizard, Varanus mokrensis sp. nov., are described from two karst fissures in the Mokrá-Western Quarry (1/2001 Turtle Joint; 2/2003 Reptile Joint), Czech Republic, providing the first documented example of a European varanid for which osteological data permit a well-supported assignment to the genus Varanus. The new species is morphologically similar to the Recent Indo-Asiatic varanids of the Varanus bengalensis group. It differs from all other Varanus species on the basis of a single autapomorphy and a combination of 11 characters. As a distinguishing feature of V. mokrensis, the parietal and squamosal processes of the postorbitofrontal form a narrowly acute angle. The teeth show distinct, smooth cutting edges along the mesial and distal margins of the apical portion of their crowns. This feature is not observed in most extant Asiatic Varanus species and may represent a plesiomorphic condition. The results of parsimony phylogenetic analyses, with and without character reweighting, reveal poor resolution within Varanus. A Bayesian analysis shows V. mokrensis to be closely related to extant representatives of the Indo-Asiatic Varanus clade, with close affinities to the V. bengalensis species group. The topology of the Bayesian tree supports the hypothesis that Miocene monitors from Mokrá are representatives of a lineage that is ancestral to the well-defined clade of extant African varanids, including the early Miocene V. rusingensis. In addition, our results support a Eurasian origin for the varanid clade. The extant African Varanus species probably originated in the late Oligocene. The radiation of African varanids probably occurred during the late Oligocene to early Miocene time interval. The occurrence of Varanus in the early Miocene of Mokrá-Western Quarry corresponds to the warm phase of the Miocene Climatic Optimum. Remains of a diverse aquatic and heliophobe amphibian fauna at the 2/2003 Reptile Joint site indicate more humid conditions than those at the 1/2001 Turtle Joint site.
Radiotherapy and hyperthermia with curative intent in recurrent high risk soft tissue sarcomas
2017-08-22

With multimodal therapy including radiotherapy and hyperthermia local tumour control is achievable even in locally recurrent tumours. The clear-cut difference of the treatment of local recurrence in contrast to primary diagnosis might either reflect difficulties in diagnosis and treatment of local recurrences or biological aggressiveness of recurrent tumours. However, we recommend to consider multimodal treatment at primary diagnosis of high risk soft tissue sarcomas.
Evaluation of mesoporous silica particles as drug carriers in hydrogels
2017-08-22

Mesoporous silica particles have recently been used in the preparation of solid oral as well as dermal pharmaceutical formulations. In this work, the use of mesoporous silica of different particle size, pore size and pore volume as carrier for curcumin in hydrogels for dermal use was investigated. Oil absorption capacity of the silica, in vitro release of curcumin from formulations and chemical stability of curcumin during three months storage were evaluated. It was found that the silica particles did not alter in vitro release of curcumin compared to an emulsion. Furthermore, curcumin was found to exhibit similar or inferior stability in hydrogels containing mesoporous silica opposed to emulsions.
Influence of spine surgery on the ability to perform an emergency stop while driving a car
2017-08-22

Although most patients performed adequately, about one third presented critical braking performance. Risk factors for impaired braking may include scheduled multisegmental fusion surgery, female sex, and pain.
Does red eye fluorescence in marine fish stand out?In situandin vivomeasurements at two depths
2017-08-22

Abstract Since the discovery of red fluorescence in fish, much effort has been made to elucidate its potential contribution to vision. However, whatever that function might be, it always implies that the combination of red fluorescence and reflectance of the red iris is sufficient to generate a visual contrast. Here, we present in vivo iris radiance measurements of T. delaisi under natural light fields at 5 and 20 m depth. We also took substrate radiance measurements of shaded and exposed foraging sites at those depths. To assess the visual contrast that can be generated by the red iris, we then calculated iris brightness in the 600-650 nm “red” waveband relative to substrate radiance. At 20 m depth, T. delaisi iris radiance substantially exceeded substrate radiance in the red waveband, regardless of exposure, and despite substrate fluorescence. Given that downwelling light in the 600-650 nm range is negligible at this depth, we can attribute this effect to iris fluorescence. As expected, contrasts were much weaker in 5 m – despite the added contribution of iris reflectance, but we identified specific substrates and conditions under which the pooled radiance caused by red reflectance and fluorescence still exceeded substrate radiance in the same waveband. Due to the negative effect of anesthesia on iris fluorescence these estimates are conservative. We conclude that the requirements to create visual brightness contrasts are fulfilled for a wide range of conditions in the natural environment of T. delaisi .
Molecular differences in IDH wildtype glioblastoma according to MGMT promoter methylation
2017-08-23

MGMT promoter methylation status does not define a molecularly distinct glioblastoma subpopulation among untreated tumors. Progressive mMGMT glioblastomas and mMGMT tumors of patients with short survival tend to have more unfavorable molecular profiles.
Design, Synthesis, and Biological Evaluation of Novel Type I1/2 p38α MAP Kinase Inhibitors with Excellent Selectivity, High Potency, and Prolonged Target Residence Time by Interfering with the R-Spine
2017-08-23

We recently reported 1a (skepinone-L) as a type I p38α MAP kinase inhibitor with high potency and excellent selectivity in vitro and in vivo. However, as a type I inhibitor, it is entirely ATP-competitive and shows just a moderate residence time. Thus, the scope was to develop a new class of advanced compounds maintaining the structural binding features of skepinone-L scaffold like inducing a glycine flip at the hinge region and occupying both hydrophobic regions I and II. Extending this scaffold with suitable residues resulted in an interference with the kinase's R-Spine. By synthesizing 69 compounds, we could significantly prolong the target residence time with one example to 3663 s, along with an excellent selectivity score of 0.006 and an outstanding potency of 1.0 nM. This new binding mode was validated by cocrystallization, showing all binding interactions typifying type I<sup>1</sup>/<sub>2</sub> binding. Moreover, microsomal studies showed convenient metabolic stability of the most potent, herein reported representatives.
Spectral call features provide information about the aggression level of greater mouse-eared bats (Myotis myotis) during agonistic interactions
2017-08-23

Bats rely heavily on acoustic signals in order to communicate with each other in a variety of social contexts. Among those, agonistic interactions and accompanying vocalizations have received comparatively little study. Here, we studied the communicational behaviour between male greater mouse-eared bats (Myotis myotis) during agonistic encounters. Two randomly paired adult males were placed in a box that allowed us to record video and sound synchronously. We describe their vocal repertoire and compare the acoustic structure of vocalizations between two aggression levels, which we quantified via the bats' behaviour. By inspecting thirty, one-minute long encounters, we identified a rich variety of social calls that can be described as two basic call types: echolocation-like, low-frequency sweeps and long, broadband squawks. Squawks, the most common vocalization, were often noisy, i.e. exhibited a chaotic spectral structure. We further provide evidence for individual signatures and the presence of nonlinear phenomena in this species' vocal repertoire. As the usage and acoustic structure of vocalizations is known to encode the internal state of the caller, we had predicted that the spectral structure of squawks would be affected by the caller's aggression level. Confirming our hypothesis, we found that increased aggression positively correlated with an increase in call frequency and tonality. We hypothesize that the extreme spectral variability between and within squawks can be explained by small fluctuations in vocal control parameters (e.g. subglottal pressure) that are caused by the elevated arousal, which is in turn influenced by the aggression level.
Why Is 10 Past 10 the Default Setting for Clocks and Watches in Advertisements? A Psychological Experiment
2017-08-23

Have you ever noticed that in watch advertisements the time is usually set at 10:10? The reasons and psychological effects of this default time setting are elusive. In Experiment 1, we hypothesized that watches showing a time setting resembling a smiling face (10:10) would enhance emotional valence and intention to buy compared to a neutral time setting (11:30), whereas a time setting resembling a sad face (8:20) would have the opposite effect. Moreover, we investigated a possible interaction effect with the gender of the participants. In Experiment 2, we directly tested the hypotheses that watches set at 10:10 resemble a smiling face, whereas watches set at 8:20 resemble a sad face. The data of the first experiment reveal that watches set at 10:10 showed a significant positive effect on the emotion of the observer and the intention to buy. However, watches set at 8:20 did not show any effect on the emotion or the intention to buy. Moreover, watches set at 10:10 induced in women significantly stronger ratings of pleasure than in men. The data of the second experiment show that participants consistently perceive high resemblance between watches set at 10:10 and a smiling face as well as high resemblance between watches set at 8:20 and a sad face. This study provides for the first time empirical evidence for the notion that using watches with a time setting resembling a smiling face (like 10:10) can positively affect the emotional response of the observers and their evaluation of a seen watch, even though they are not aware of the fact that the shown time setting is inducing this effect. Practical implications of the observed findings and alternative explanations are discussed.
Under the Microscope: Single-Domain Antibodies for Live-Cell Imaging and Super-Resolution Microscopy
2017-08-24

Single-domain antibodies (sdAbs) have substantially expanded the possibilities of advanced cellular imaging such as live-cell or super-resolution microscopy to visualize cellular antigens and their dynamics. In addition to their unique properties including small size, high stability, and solubility in many environments, sdAbs can be efficiently functionalized according to the needs of the respective imaging approach. Genetically encoded intrabodies fused to fluorescent proteins (chromobodies) have become versatile tools to study dynamics of endogenous proteins in living cells. Additionally, sdAbs conjugated to organic dyes were shown to label cellular structures with high density and minimal fluorophore displacement making them highly attractive probes for super-resolution microscopy. Here, we review recent advances of the chromobody technology to visualize localization and dynamics of cellular targets and the application of chromobody-based cell models for compound screening. Acknowledging the emerging importance of super-resolution microscopy in cell biology, we further discuss advantages and challenges of sdAbs for this technology.
Semantic values as latent parameters: Testing a fixed threshold hypothesis for cardinal readings of few & many
2017-08-24

Abstract Certain uses of vague quantifiers few and many intuitively compare a true quantity to a priori expectations about that quantity. A concrete proposal for the truth conditions of such readings stipulates a contextually-stable threshold on a contextually-variable representation of a priori expectations (Clark, H. H. 1991. Words, the world, and their possibilities. In Lockhead G. R. &amp; Pomerantz J. R. (eds.), The perception of structure: Essays in honor of Wendell R Garner, 263–277. Washington, DC: American Psychological Association; Fernando, T. &amp; H. Kamp. 1996. Expecting many. In Galloway T. &amp; Spence J. (eds.), Proceedings of SALT VI, 53–68. Ithaca, NY: Cornell University.) The main goal of this paper is to introduce data-driven computational modeling as a means to implement and test complex semantic theories of this kind, which may be hard to assess based on solitary introspection of meaning intuitions. Based on an empirical measure of a priori expectations, we use Bayesian inference to estimate likely values of the latent threshold parameters given empirical data from production and comprehension tasks. We demonstrate how posterior inference and statistical model comparison can help assess the plausibility of the fixed threshold hypothesis.
Combination of cuprizone and experimental autoimmune encephalomyelitis to study inflammatory brain lesion formation and progression
2017-08-24

Abstract Brain‐intrinsic degenerative cascades are a proposed factor driving inflammatory lesion formation in multiple sclerosis (MS) patients. We recently described a model combining noninflammatory cytodegeneration (via cuprizone) with the classic active experimental autoimmune encephalomyelitis (Cup/EAE model), which exhibits inflammatory forebrain lesions. Here, we describe the histopathological characteristics and progression of these Cup/EAE lesions. We show that inflammatory lesions develop at various topographical sites in the forebrain, including white matter tracts and cortical and subcortical grey matter areas. The lesions are characterized by focal demyelination, discontinuation of the perivascular glia limitans, focal axonal damage, and neutrophil granulocyte extravasation. Transgenic mice with enhanced green fluorescent protein‐expressing microglia and red fluorescent protein‐expressing monocytes reveal that both myeloid cell populations contribute to forebrain inflammatory infiltrates. EAE‐triggered inflammatory cerebellar lesions were augmented in mice pre‐intoxicated with cuprizone. Gene expression studies suggest roles of the chemokines Cxcl10 , Ccl2 , and Ccl3 in inflammatory lesion formation. Finally, follow‐up experiments in Cup/EAE mice with chronic disease revealed that forebrain, but not spinal cord, lesions undergo spontaneous reorganization and repair. This study underpins the significance of brain‐intrinsic degenerative cascades for immune cell recruitment and, in consequence, MS lesion formation.