Fix xnumpy_load for .npz files
Opened by albertvillanova (closed)

PR:
- #5626 

implemented support for streaming `.npy` files by using `numpy.load`.

However, it introduced a bug when used with `.npz` files, within a context manager:
```
ValueError: seek of closed file
```
or in streaming mode:
```
ValueError: I/O operation on closed file.
```

This PR fixes the bug and tests for both `.npy` and `.npz` files.

Fix #5711.

Comments:
_The documentation is not available anymore as the PR was closed or merged._

<details>
<summary>Show benchmarks</summary>

PyArrow==8.0.0

<details>
<summary>Show updated benchmarks!</summary>

### Benchmark: benchmark_array_xd.json

| metric | read_batch_formatted_as_numpy after write_array2d | read_batch_formatted_as_numpy after write_flattened_sequence | read_batch_formatted_as_numpy after write_nested_sequence | read_batch_unformated after write_array2d | read_batch_unformated after write_flattened_sequence | read_batch_unformated after write_nested_sequence | read_col_formatted_as_numpy after write_array2d | read_col_formatted_as_numpy after write_flattened_sequence | read_col_formatted_as_numpy after write_nested_sequence | read_col_unformated after write_array2d | read_col_unformated after write_flattened_sequence | read_col_unformated after write_nested_sequence | read_formatted_as_numpy after write_array2d | read_formatted_as_numpy after write_flattened_sequence | read_formatted_as_numpy after write_nested_sequence | read_unformated after write_array2d | read_unformated after write_flattened_sequence | read_unformated after write_nested_sequence | write_array2d | write_flattened_sequence | write_nested_sequence |
|--------|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| new / old (diff) | 0.006498 / 0.011353 (-0.004855) | 0.004406 / 0.011008 (-0.006602) | 0.097136 / 0.038508 (0.058628) | 0.027711 / 0.023109 (0.004601) | 0.303092 / 0.275898 (0.027194) | 0.336804 / 0.323480 (0.013324) | 0.004838 / 0.007986 (-0.003148) | 0.004533 / 0.004328 (0.000204) | 0.075062 / 0.004250 (0.070812) | 0.035105 / 0.037052 (-0.001947) | 0.310245 / 0.258489 (0.051756) | 0.347086 / 0.293841 (0.053245) | 0.030867 / 0.128546 (-0.097679) | 0.011436 / 0.075646 (-0.064211) | 0.320728 / 0.419271 (-0.098544) | 0.042303 / 0.043533 (-0.001230) | 0.308177 / 0.255139 (0.053038) | 0.333673 / 0.283200 (0.050473) | 0.084736 / 0.141683 (-0.056947) | 1.477391 / 1.452155 (0.025237) | 1.530399 / 1.492716 (0.037682) |

### Benchmark: benchmark_getitem\_100B.json

| metric | get_batch_of\_1024\_random_rows | get_batch_of\_1024\_rows | get_first_row | get_last_row |
|--------|---|---|---|---|
| new / old (diff) | 0.212698 / 0.018006 (0.194692) | 0.409098 / 0.000490 (0.408608) | 0.004202 / 0.000200 (0.004002) | 0.000070 / 0.000054 (0.000016) |

### Benchmark: benchmark_indices_mapping.json

| metric | select | shard | shuffle | sort | train_test_split |
|--------|---|---|---|---|---|
| new / old (diff) | 0.022725 / 0.037411 (-0.014686) | 0.095866 / 0.014526 (0.081340) | 0.104153 / 0.176557 (-0.072404) | 0.162964 / 0.737135 (-0.574171) | 0.106505 / 0.296338 (-0.189834) |

### Benchmark: benchmark_iterating.json

| metric | read 5000 | read 50000 | read_batch 50000 10 | read_batch 50000 100 | read_batch 50000 1000 | read_formatted numpy 5000 | read_formatted pandas 5000 | read_formatted tensorflow 5000 | read_formatted torch 5000 | read_formatted_batch numpy 5000 10 | read_formatted_batch numpy 5000 1000 | shuffled read 5000 | shuffled read 50000 | shuffled read_batch 50000 10 | shuffled read_batch 50000 100 | shuffled read_batch 50000 1000 | shuffled read_formatted numpy 5000 | shuffled read_formatted_batch numpy 5000 10 | shuffled read_formatted_batch numpy 5000 1000 |
|--------|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| new / old (diff) | 0.431336 / 0.215209 (0.216127) | 4.283290 / 2.077655 (2.205635) | 1.982418 / 1.504120 (0.478298) | 1.762104 / 1.541195 (0.220909) | 1.807528 / 1.468490 (0.339038) | 0.695507 / 4.584777 (-3.889270) | 3.376299 / 3.745712 (-0.369413) | 1.856642 / 5.269862 (-3.413219) | 1.154258 / 4.565676 (-3.411419) | 0.082749 / 0.424275 (-0.341526) | 0.012289 / 0.007607 (0.004682) | 0.525842 / 0.226044 (0.299798) | 5.285764 / 2.268929 (3.016835) | 2.389926 / 55.444624 (-53.054698) | 2.021830 / 6.876477 (-4.854646) | 2.107460 / 2.142072 (-0.034612) | 0.808118 / 4.805227 (-3.997109) | 0.150791 / 6.500664 (-6.349873) | 0.065825 / 0.075469 (-0.009644) |

### Benchmark: benchmark_map_filter.json

| metric | filter | map fast-tokenizer batched | map identity | map identity batched | map no-op batched | map no-op batched numpy | map no-op batched pandas | map no-op batched pytorch | map no-op batched tensorflow |
|--------|---|---|---|---|---|---|---|---|---|
| new / old (diff) | 1.206939 / 1.841788 (-0.634849) | 13.795902 / 8.074308 (5.721594) | 14.107950 / 10.191392 (3.916558) | 0.144300 / 0.680424 (-0.536124) | 0.016478 / 0.534201 (-0.517723) | 0.379395 / 0.579283 (-0.199888) | 0.388437 / 0.434364 (-0.045927) | 0.451443 / 0.540337 (-0.088894) | 0.523142 / 1.386936 (-0.863794) |

</details>
PyArrow==latest

<details>
<summary>Show updated benchmarks!</summary>

### Benchmark: benchmark_array_xd.json

| metric | read_batch_formatted_as_numpy after write_array2d | read_batch_formatted_as_numpy after write_flattened_sequence | read_batch_formatted_as_numpy after write_nested_sequence | read_batch_unformated after write_array2d | read_batch_unformated after write_flattened_sequence | read_batch_unformated after write_nested_sequence | read_col_formatted_as_numpy after write_array2d | read_col_formatted_as_numpy after write_flattened_sequence | read_col_formatted_as_numpy after write_nested_sequence | read_col_unformated after write_array2d | read_col_unformated after write_flattened_sequence | read_col_unformated after write_nested_sequence | read_formatted_as_numpy after write_array2d | read_formatted_as_numpy after write_flattened_sequence | read_formatted_as_numpy after write_nested_sequence | read_unformated after write_array2d | read_unformated after write_flattened_sequence | read_unformated after write_nested_sequence | write_array2d | write_flattened_sequence | write_nested_sequence |
|--------|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| new / old (diff) | 0.006503 / 0.011353 (-0.004850) | 0.004578 / 0.011008 (-0.006430) | 0.076278 / 0.038508 (0.037770) | 0.028052 / 0.023109 (0.004943) | 0.337873 / 0.275898 (0.061975) | 0.371368 / 0.323480 (0.047888) | 0.005086 / 0.007986 (-0.002899) | 0.003354 / 0.004328 (-0.000975) | 0.076876 / 0.004250 (0.072625) | 0.039146 / 0.037052 (0.002093) | 0.340299 / 0.258489 (0.081810) | 0.381209 / 0.293841 (0.087368) | 0.031771 / 0.128546 (-0.096775) | 0.011670 / 0.075646 (-0.063976) | 0.085156 / 0.419271 (-0.334116) | 0.041990 / 0.043533 (-0.001543) | 0.338644 / 0.255139 (0.083505) | 0.362461 / 0.283200 (0.079262) | 0.089772 / 0.141683 (-0.051911) | 1.480341 / 1.452155 (0.028187) | 1.562815 / 1.492716 (0.070099) |

### Benchmark: benchmark_getitem\_100B.json

| metric | get_batch_of\_1024\_random_rows | get_batch_of\_1024\_rows | get_first_row | get_last_row |
|--------|---|---|---|---|
| new / old (diff) | 0.205700 / 0.018006 (0.187694) | 0.402206 / 0.000490 (0.401716) | 0.001212 / 0.000200 (0.001012) | 0.000070 / 0.000054 (0.000016) |

### Benchmark: benchmark_indices_mapping.json

| metric | select | shard | shuffle | sort | train_test_split |
|--------|---|---|---|---|---|
| new / old (diff) | 0.025172 / 0.037411 (-0.012240) | 0.100959 / 0.014526 (0.086433) | 0.108464 / 0.176557 (-0.068093) | 0.161321 / 0.737135 (-0.575814) | 0.114245 / 0.296338 (-0.182093) |

### Benchmark: benchmark_iterating.json

| metric | read 5000 | read 50000 | read_batch 50000 10 | read_batch 50000 100 | read_batch 50000 1000 | read_formatted numpy 5000 | read_formatted pandas 5000 | read_formatted tensorflow 5000 | read_formatted torch 5000 | read_formatted_batch numpy 5000 10 | read_formatted_batch numpy 5000 1000 | shuffled read 5000 | shuffled read 50000 | shuffled read_batch 50000 10 | shuffled read_batch 50000 100 | shuffled read_batch 50000 1000 | shuffled read_formatted numpy 5000 | shuffled read_formatted_batch numpy 5000 10 | shuffled read_formatted_batch numpy 5000 1000 |
|--------|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| new / old (diff) | 0.437425 / 0.215209 (0.222216) | 4.362212 / 2.077655 (2.284557) | 2.068815 / 1.504120 (0.564695) | 1.864089 / 1.541195 (0.322894) | 1.909038 / 1.468490 (0.440548) | 0.696097 / 4.584777 (-3.888680) | 3.358628 / 3.745712 (-0.387084) | 2.999085 / 5.269862 (-2.270777) | 1.533917 / 4.565676 (-3.031760) | 0.083010 / 0.424275 (-0.341266) | 0.012372 / 0.007607 (0.004765) | 0.539926 / 0.226044 (0.313882) | 5.438326 / 2.268929 (3.169397) | 2.498581 / 55.444624 (-52.946043) | 2.153359 / 6.876477 (-4.723117) | 2.177891 / 2.142072 (0.035819) | 0.803169 / 4.805227 (-4.002059) | 0.151079 / 6.500664 (-6.349585) | 0.065981 / 0.075469 (-0.009489) |

### Benchmark: benchmark_map_filter.json

| metric | filter | map fast-tokenizer batched | map identity | map identity batched | map no-op batched | map no-op batched numpy | map no-op batched pandas | map no-op batched pytorch | map no-op batched tensorflow |
|--------|---|---|---|---|---|---|---|---|---|
| new / old (diff) | 1.336682 / 1.841788 (-0.505106) | 14.133055 / 8.074308 (6.058747) | 14.033972 / 10.191392 (3.842580) | 0.152109 / 0.680424 (-0.528315) | 0.016475 / 0.534201 (-0.517726) | 0.387808 / 0.579283 (-0.191475) | 0.378347 / 0.434364 (-0.056017) | 0.484732 / 0.540337 (-0.055606) | 0.569907 / 1.386936 (-0.817029) |

</details>
</details>

![](https://cml.dev/watermark.png#1c4ec00511868bd881e84a6f7e0333648d833b8e "CML watermark")