jimnoneill/paper-to-field-training huggingface dataset:
Proof-of-Concept Examples of Performance-Transparent Programming Models

Machine-specific optimizations command the machine to behave in a specific way. As current programming models largely leave machine details unexposed, they cannot accommodate direct encoding of such commands. In previous work we have proposed the design of performance-transparent programming models to facilitate this use-case; this report contains proof-of-concept examples of such programming models. We demonstrate how programming model abstractions may reveal the memory footprint, vector unit utilization and data reuse of an application, with prediction accuracy ranging from 0 to 25 \%.

Topic: Forecasting Techniques and Applications
Subfield: Management Science and Operations Research
Field: Decision Sciences
Domain: Social Sciences
MOESM4 of Functional exploration of co-expression networks identifies a nexus for modulating protein and citric acid titres in Aspergillus niger submerged culture

Additional file 4. Localisation of mitochondria in young A. niger hyphae is not dependent on secG, ageB, or geaB expression.

Topic: Fungal and yeast genetics research
Subfield: Molecular Biology
Field: Biochemistry, Genetics and Molecular Biology
Domain: Life Sciences
National Human Genome Research Institute Genomic Data Science Analysis, Visualization, and Informatics Lab-Space: Reaching out to Clinicians

enetic testing in the clinic has begun to emerge as a tool towards diagnosis in addition to serving as a confirmatory function. 1The ability of genetic testing to play a leading role in diagnosis depends on the research and understanding of the role of genetic variants in specific diseases, as well as the underlying architecture and systems that support our health care providers.The National Human Genome Research Institute Genomic Data Science Analysis, Visualization, and Informatics Lab-space (AnVIL) is a cloud-based genomic data sharing and analysis platform.AnVIL facilitates integration and computing on and across large datasets generated by National Human Genome Research Institute programs, as well as initiatives funded by National Institutes of Health or by other agencies that support human genomics research.Since the launch of AnVIL in 2018, the platform provides access to genomic data from over 600 000 samples from several major consortiums including but not limited to 1000 Genomes, Centers for Common Disease Genomics, Center for Mendelian Genomics, eMERGE Network (electronic medical records and genomics), Genotype-Tissue Expression Biobank, Human Pangenome Reference Consortium, the Polygenic Risk in Diverse Populations Consortium, and the Telomere-to-Telomere consortium.The multiple consortiums sharing data through AnVIL have obtained Institutional Review Board approval.AnVIL is designed to provide the tools

Topic: Gene expression and cancer classification
Subfield: Molecular Biology
Field: Biochemistry, Genetics and Molecular Biology
Domain: Life Sciences
Nonparametric Discrete Choice Models With Unobserved Heterogeneity

In this research, we provide a new method to estimate discrete choice models with unobserved heterogeneity that can be used with either cross-sectional or panel data. The method imposes nonparametric assumptions on the systematic subutility functions and on the distributions of the unobservable random vectors and the heterogeneity parameter. The estimators are computationally feasible and strongly consistent. We provide an empirical application of the estimator to a model of store format choice. The key insights from the empirical application are: (1) consumer response to cost and distance contains interactions and nonlinear effects, which implies that a model without these effects tends to bias the estimated elasticities and heterogeneity distribution, and (2) the increase in likelihood for adding nonlinearities is similar to the increase in likelihood for adding heterogeneity, and this increase persists as heterogeneity is included in the model.

Topic: Economic and Environmental Valuation
Subfield: Economics and Econometrics
Field: Economics, Econometrics and Finance
Domain: Social Sciences
2-(1<i>H</i>-1,2,3-Benzotriazol-1-yl)-1-(2-fluorobenzoyl)ethyl 2-chlorobenzoate

In the crystal structure of the title compound, C22H15ClFN3O3, the crystal packing is controlled by van der Waals forces. Weak intramolecular C—H⋯O and C—H⋯F hydrogen bonds link the molecules into chains extended along the c axis.The packing is further stabilized by van der Waals forces.

Topic: Synthesis and biological activity
Subfield: Organic Chemistry
Field: Chemistry
Domain: Physical Sciences
Tau (MAPT) haplotypes in Jordan: new evidence on the Middle East as a melting-pot predating Neolithic migration

Frequencies of H1 and H2 haplotypes of the microtubule-associated protein tau (MAPT) gene were examined in two Jordanian samples. The criterion for haplotype assignment was the presence/absence of the intronic 238-bp deletion, located between exons 9 and 10 of the MAPT genomic region. We further compiled MAPT haplotype frequencies in Middle Eastern, South Asian, and European populations to widen the scope of analyses. Jordan MAPT*H2 haplotype frequencies peaked among worldwide samples analysed to date, with the Jordan general population featuring the top value (0.386). AMOVA tests results indicated spatial genetic structuring, as they unveiled significant differences in H2 frequencies between South Asia and Europe, with a hypothetical contact zone in the Middle East. The southeastern region of the Middle East shares low H2 frequencies with South Asia, while the northwestern area shows high H2 frequencies, similar to and even higher than observed in Europe. We suggest that high H2 frequencies could have originated at the beginning of the Neolithic in the western region of the Middle East, most likely through genetic drift episodes associated with founding events. Subsequently, the arrival of Neolithic farmers boosted the H2 haplotype spreading throughout Europe.

Topic: Forensic and Genetic Research
Subfield: Genetics
Field: Biochemistry, Genetics and Molecular Biology
Domain: Life Sciences
Improving SDN Scalability With Protocol-Oblivious Source Routing: A System-Level Study

Software-defined networking (SDN) has been considered as a break-through technology for the next-generation Internet. It enables fine-grained flow control that can make networks more flexible and programmable. However, this might lead to scalability issues due to the possible flow state explosion in SDN switches. SDN-based source routing can reduce the volume of flow-tables significantly by encoding the path information into packet headers. In this paper, we leverage the protocol-oblivious forwarding instruction set to design protocol-oblivious source routing (POSR), which is a protocol-independent, bandwidth-efficient, and flow-table-saving packet forwarding technique. We lay out the packet format for POSR, come up with the packet processing pipelines for realizing unicast, multicast, and link failure recovery, and implement POSR in a protocol-oblivious forwarding-enabled SDN network system. Experiments are then performed in a network testbed, which consists of 14 stand-alone SDN switches, to validate the advantages of POSR. Specifically, we compare POSR with several OpenFlow-based benchmarks for unicast, multicast, and link failure recovery, and confirm that POSR can reduce flow-table utilization effectively, shorten path setup latency and expedite link failure recovery.

Topic: Software-Defined Networks and 5G
Subfield: Computer Networks and Communications
Field: Computer Science
Domain: Physical Sciences
ChemInform Abstract: Synthesis, IR and Raman Spectra and Thermal Decomposition of Two New Hydrazinium (1+) Fluoroaluminates, (N2H5)2AlF5×H2O and (N2H5) 2AlF5.

Abstract ChemInform is a weekly Abstracting Service, delivering concise information at a glance that was extracted from about 100 leading journals. To access a ChemInform Abstract of an article which was published elsewhere, please select a “Full Text” option. The original article is trackable via the “References” option.

Topic: Inorganic Fluorides and Related Compounds
Subfield: Inorganic Chemistry
Field: Chemistry
Domain: Physical Sciences
sj-docx-3-gut-10.1177_26345161221147744 – Supplemental material for Risk of Gastric Cancer and Utility of Endoscopic Screening for Lynch Syndrome Patients

Supplemental material, sj-docx-3-gut-10.1177_26345161221147744 for Risk of Gastric Cancer and Utility of Endoscopic Screening for Lynch Syndrome Patients by Ariel Bar-Mashiah, Muhammad Danyal Ahsan, Rylee McGonigle and Ravi N. Sharaf in Foregut: The Journal of the American Foregut Society

Topic: Genetic factors in colorectal cancer
Subfield: Pathology and Forensic Medicine
Field: Medicine
Domain: Health Sciences
Global Recession – Human Resources and Regional Development of the Czech Republic

Social and economical development does not have linear course.About tenyear smaller recessions were replaced by global recession at the present time.Reduction of the population purchasing power has an impact on costs reduction, which donated development of the human resources quality and also on costs reduction, which donated regeneration and leisure time activities.Thus cyclic economical recession does not mean only industrial production reduction, reduction of population consumption and reduction of the living standards, but it is also translated into the qualitative level of the regional development, where investments intended for tourism were reduced.

Topic: Regional Development and Policy
Subfield: Political Science and International Relations
Field: Social Sciences
Domain: Social Sciences
Clinical Results of Surgical Treatment using Cannulated Screw for Patellar Fractures

Early knee joint movement is reguired in the medical treatment of patella fractures. We performed percutaneous cannulated screw fixation for patella fracture on 15 knees of 15 patients. The mean age of patients was 66.8 years (range ; 16 to 87 years). The mean follow-up time was 15 months. Bone union was achieved in all cases. All of the patients showed satisfactory results, experiencing no skin damages by screws.

Topic: Bone fractures and treatments
Subfield: Epidemiology
Field: Medicine
Domain: Health Sciences
CCDC 875058: Experimental Crystal Structure Determination

An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.

Topic: Crystallization and Solubility Studies
Subfield: Materials Chemistry
Field: Materials Science
Domain: Physical Sciences
Fifth Stenhouse‐Williams Memorial Lecture Oxygen and the Obligate Anaerobe

Journal Article Fifth Stenhouse‐Williams Memorial Lecture Oxygen and the Obligate Anaerobe Get access J. G. MORRIS J. G. MORRIS Department of Botany & Microbiology, School of Biological Sciences, University College of Wales, Aberystwyth SY23 3DA, Wales, U.K. Search for other works by this author on: Oxford Academic Google Scholar Journal of Applied Bacteriology, Volume 40, Issue 3, 1 June 1976, Pages 229–244, https://doi.org/10.1111/j.1365-2672.1976.tb04171.x Published: 01 June 1976

Topic: Hydrogen's biological and therapeutic effects
Subfield: Surgery
Field: Medicine
Domain: Health Sciences
Regeneration in permanent immature necrotic tooth –a case report

Immature necrotic teeth pose a challenge to endodontist. To simplify this challenge regenerative endodontic has gained popularity these days. This approach is based on triggering stem cells and repopulate over scaffold to induce regeneration of pulp like tissue. This case report presents a case of regeneration of apical tissue with significant healing of periapical lesion.

Topic: Endodontics and Root Canal Treatments
Subfield: Oral Surgery
Field: Dentistry
Domain: Health Sciences
[Effect of low blood alcohol concentrations in relation to time of day].

The physical performance of 23 persons was tested at different time of day (morning, noon, evening) under the influence of low doses of alcohol (0.8%). The results obtained indicate, that the capability of performing the tests was remarkable reduced. In the evening the effect of alcohol was significantly higher than at noon and morning; the time of recovery was also prolonged. Under these aspects the limit of 0.8% for car drivers in (West) Germany has to be reconsidered.

Topic: Sleep and Work-Related Fatigue
Subfield: Experimental and Cognitive Psychology
Field: Psychology
Domain: Social Sciences
The University of Glasgow, 1451–1577. By John Durkan and James Kirk. Pp. xiv + 498 + 6 illustrations. Glasgow: University of Glasgow Press, 1977. £15.

An abstract is not available for this content so a preview has been provided. Please use the Get access link above for information on how to access this content.

Topic: Scottish History and National Identity
Subfield: History
Field: Arts and Humanities
Domain: Social Sciences
Study of Robust Adaptive Beamforming Based on Low-Complexity DFT Spatial Sampling

In this paper, a novel and robust algorithm is proposed for adaptive beamforming based on the idea of reconstructing the autocorrelation sequence (ACS) of a random process from a set of measured data. This is obtained from the first column and the first row of the sample covariance matrix (SCM) after averaging along its diagonals. Then, the power spectrum of the correlation sequence is estimated using the discrete Fourier transform (DFT). The DFT coefficients corresponding to the angles within the noise-plus-interference region are used to reconstruct the noise-plus-interference covariance matrix (NPICM), while the desired signal covariance matrix (DSCM) is estimated by identifying and removing the noise-plus-interference component from the SCM. In particular, the spatial power spectrum of the estimated received signal is utilized to compute the correlation sequence corresponding to the noise-plus-interference in which the dominant DFT coefficient of the noise-plus-interference is captured. A key advantage of the proposed adaptive beamforming is that only little prior information is required. Specifically, an imprecise knowledge of the array geometry and of the angular sectors in which the interferences are located is needed. Simulation results demonstrate that compared with previous reconstruction-based beamformers, the proposed approach can achieve better overall performance in the case of multiple mismatches over a very large range of input signal-to-noise ratios.

Topic: Direction-of-Arrival Estimation Techniques
Subfield: Signal Processing
Field: Computer Science
Domain: Physical Sciences
Electroweak results from the CMS experiment

Results will be presented of electroweak studies with W and Z bosons with data collected at a center-of-mass energy of 7 TeV by the CMS experiment at the LHC.Measurements include the inclusive W , Z and Drell-Yan production differential cross sections and measurements of W and Z production in association with a photon and of diboson production.These results are interpreted in terms of constraints on anomalous triple gauge couplings.Forward-backward asymmetries and charge asymmetries will be presented and also associated jet production and jet multiplicities including b-jets in association with Z bosons, and of c-jets in association with W bosons The excellent level of theoretical and experimental understanding of these processes allows electroweak tests at the LHC at an unprecedented level of precision.

Topic: Particle physics theoretical and experimental studies
Subfield: Nuclear and High Energy Physics
Field: Physics and Astronomy
Domain: Physical Sciences
Human Emotion Classification from EEG Signals Using Multiwavelet Transform

In this paper, we propose new features based on multiwavelet transform for classification of human emotions from electroencephalogram (EEG) signals. The EEG signal measures electrical activity of the brain, which contains lot of information related to emotional states. The sub-signals obtained by multiwavelet decomposition of EEG signals are plotted in a 3-D phase space diagram using phase space reconstruction (PSR). The mean and standard deviation of Euclidian distances are computed from 3-D phase space diagram. These features have been used as input features set for multiclass least squares support vector machines (MC-LS-SVM) together with the radial basis function (RBF), Mexican hat wavelet and Morlet wavelet kernel functions for classification of emotions. The proposed features based on multiwavelet transform of EEG signals with Morlet wavelet kernel function of MC-LS-SVM have provided better classification accuracy for classification of emotions.

Topic: EEG and Brain-Computer Interfaces
Subfield: Cognitive Neuroscience
Field: Neuroscience
Domain: Life Sciences
Municipal Administration and the Sports Franchise Relocation Issue

educational scale than at higher levels. Differences in technical skills are probably greater between individuals with one or two years of schooling beyond high school and those with a high school diploma only, than they are between individuals with five or more years of college as opposed to only four years of college. 25. Regression coefficients are given in the appendix. 26. Details on scoring procedures for all the variables in this appendix are reported in Bhakdi, op. cit., appendices B, C, and E. 27. Measurement errors (U2) on individual level variables are given in Suchitra P. Bhakdi, op. cit., appendix D. The error for the mean is simply a2/n. 28. Cf., Karl G. Joreskog, A General Method for Analysis of Covariance Structures, Biometrika 57 (1970), pp. 239-251, and Bhakdi, op. cit., appendices B and C. Appendix C discusses the validity and reliability of the scales.

Topic: Sports Analytics and Performance
Subfield: Economics and Econometrics
Field: Economics, Econometrics and Finance
Domain: Social Sciences
Multi-disciplinary handover

Up to now, handover studies have typically involved one health care professional group or a single hospital department. Using distributed cognition and cognitive work analysis as frameworks, this ethnographic study is intended to identify the common and unique elements of handover of care in three different hospital departments (Internal Medicine, General Surgery, and Emergency Medicine), with all professional groups that conduct handover. In addition, feedback will be sought from patients and their families on the content of handovers as well as the handover process.

Topic: Hospital Admissions and Outcomes
Subfield: Emergency Medicine
Field: Medicine
Domain: Health Sciences
Regulation of<i>Termitomyces clypeatus</i>protoplast regeneration by Krebs cycle acids

Abstract Mycelial derived protoplasts of the mushroom, Termitomyces clypeatus , did not regenerate in synthetic growth medium but did regenerate if casein hydrolysate was added to the same medium. Aspartic acid, glutamic acid, histidine, of serine and alanine when added individually had a similar effect on regeneration to that of casein hydrolysate. Krebs cycle acids also supported protoplast regeneration in the presence of glucose. Glucose alone, in the regenerating medium supported osmotically stable germ tube formation from protoplasts while Krebs cycle acid alone could not even change the osmotic fragility of the protoplasts. Electron microscopy of germ tube preparations indicated the presence of an incomplete wall structure when regeneration took place in the presence of glucose alone.

Topic: Fungal Biology and Applications
Subfield: Pharmacology
Field: Medicine
Domain: Health Sciences
Swedish Shell V The National Tax Board

Abstract Transfer pricing is one of the major problems facing the nation-state in its relation with the TNCs. In Sweden the National Tax Board has made extensive inquiries into the pricing policies of the transnational corporations in the oil industry, with special attention given to Mobil, Texaco and Shell. RMR has selected some of the central parts of a judgement on the policies of Swedish Shell for the year 1976.

Topic: Corporate Taxation and Avoidance
Subfield: Accounting
Field: Business, Management and Accounting
Domain: Social Sciences
Improvement of myocardial displacement estimation using subkernels for cross correlation between ultrasonic RF echoes

Speckle tracking is a useful diagnostic method for assessing the cardiac function from ultrasonic echoes. Some factors influence the performance of the conventional speckle tracking method. Deformation due to myocardial contraction and relaxation decreases the correlation between RF echoes. Also, if a strong echo, such as echoes from the epicardium, is included in a correlation kernel, the displacement estimated from the kernel becomes close to the displacement of the epicardium even when the myocardium in the middle of the heart wall is the target to be tracked. To overcome such a problem, in the present study, we proposed a two-step tracking method. In the first step, the displacement is coarsely estimated using a correlation kernel of size similar to that in conventional speckle tracking of (13.8°, 9.1 mm) in the lateral and axial directions. The kernel is divided into small subkernels (2.8°, 1.9 mm). By estimating the correlation coefficient with respect to each subkernel and averaging correlation coefficients obtained from all subkernels, the contribution of a peculiar strong echo included in one of the subkernels can be suppressed. In the second step, the residual displacement is finely estimated using a smaller kernel (13.8°, 3.6 mm). Using a smaller kernel, the influence of myocardial deformation can be suppressed, but there might be multiple regions that have echo patterns similar to that in the kernel, leading to tracking errors. Therefore, the search region in the second step is narrowed because the coarse displacement has already been estimated and compensated in the first step. In the present study, the proposed method was validated using a phantom made of urethane rubber, which was deformed by an actuator. The displacement of the phantom could be estimated with a lower error of 0.059 mm by the proposed method compared to the error in the conventional method of 0.097 mm. Furthermore, the proposed method was applied to in vivo measurement of the human heart. The myocardial displacement could be estimated successfully even when the epicardium was included in a correlation kernel. These results show that the proposed method provides a more accurate and robust estimation of the myocardial displacement.

Topic: Cardiovascular Health and Disease Prevention
Subfield: Cardiology and Cardiovascular Medicine
Field: Medicine
Domain: Health Sciences