jimnoneill/paper-to-field-training huggingface dataset:
SH0906258.10FU

Field: Biochemistry, Genetics and Molecular Biology (Life Sciences)

UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
SEI Independent Research and Development Projects

Field: Computer Science (Physical Sciences)

Each year, the Software Engineering Institute (SEI) undertakes several Independent Research and Development (IR&D) projects. These projects serve to: (a) support feasibility studies investigating whether further work by the SEI would be of potential benefit and (b) support further exploratory work to determine if there is sufficient value in eventually funding the feasibility study work as an SEI initiative. Projects are chosen based on their potential to mature and/or transition software engineering practices, develop information that will help in deciding whether further work is worth funding, and set new directions for SEI work. This report describes the IR&D projects that were conducted during fiscal year 2003 (October 2002 through September 2003).
Studies on Relationship between Embryogenesis and Germination in Orchidaceae.

Field: Agricultural and Biological Sciences (Life Sciences)

47種のラン科植物を供試し未熟種子の胚発生過程と発芽の様相との関係について追究した.1.供試材料47種における初発芽能を示す種子の胚発生段階は,4細胞期以前から中間期までの範囲にあり,ほとんどの種において発芽率が低く,発芽後の発育が不良で,平均発芽日数も長くなる傾向がみられた.クマガイソウは例外的で,初発芽能を示す種子がもっとも発芽率が高く,平均発芽日数も短かった.2.鮫高発芽率を示す種子の胚発生段階は,16細胞期から胚発生完了以降に及ぶ範囲にあったが,胚発生完了前後の段階において最高発芽率を示す種がほとんどで(クマガイソウおよびキンランを除く)あった.最高発芽率は,0.8%から100%の範囲にあり,この段階にある種子はいずれの種も(クマガイソウを除く)発芽後の発育が良好であった.とくに洋ランの種(Phal.schillerianaを除く),エビネ属の熱帯産落葉性の種およびエビネ属に近縁とされる5種において発芽率が著しく高く,一方,この段階ではとくに発芽率および発芽後の発育が不良だったのは,クマガイソウおよびキンランであった.3.初発芽能や最高発芽率を示す種子の胚発生段階と開花期の子房の発育程度との間には密接な関係は認め難かった.4.最高に達して以降の発芽率の様相は,a型:観察した最終の齢において最高発芽率を示し,子房が黄変裂開直前のもの,b型:観察した最終の齢において最高発芽率を示し,さらに齢が増すことにより発芽率が変化する可能性があるもの,c型:発芽率が低くなる傾向が認められたもの,およびd型:観察した最終の齢まで最高発芽率が持続していたものの4型に分けられ,c型がもっとも多かった.5.平均発芽日数は,3日から305日の範囲にあり,齢および種による変動がきわめて大きかった.平均発芽日数と齢との関係は,a型:齢が増すにしたがって平均発芽日数が短くなる傾向が認められるもの,およびb型:平均発芽日数がもっとも短かった齢を境に,それ以降再び平均発芽日数が長くなる傾向が認められるものの2種類の型がみられ,a型に属する種が多かった.6.培地としては,一般的にはHyponex培地がすぐれたが,オニノヤガラおよびホウサイランに対しては,Murashige and Skoog培地が発芽率および発芽後の発育に対して好適な結果をもたらした.7.供試材料47種における胚発生段階と発芽との間には上記した諸関係のいずれにおいても,亜科の特性が現れているとは認め難かった.
Comparative Advantage of the United States and South Korean Manmade Textile Industries

Field: Economics, Econometrics and Finance (Social Sciences)

This study examined the comparative advantage of manmade textile (MMT) industries in the United States (US) and South Korea (SK). The Revealed Comparative Advantage (RCA) framework was used to assess the MMT industries' performance in both countries from 2004 to 2013. With the recent ratification of the United States-South Korea Free Trade Agreement (KORUS FTA), it is important to understand the current state of these industries. Using UN Comtrade export data, the RCA index values were calculated and analyzed for 27 MMT commodities, three aggregate groups, and the whole industry. It was found that SK had a consistent comparative advantage for the whole industry. Furthermore, SK had a larger number of products with a comparative advantage. The research findings indicate that the MMT industry in SK is likely to outperform the US following the complete ratification of the KORUS FTA.
Analysis of Corn Stover Structural Properties for Mechanical Processing Applications

Field: Agricultural and Biological Sciences (Life Sciences)

The research objective of this study is to examine the behavior of chopped corn stover biomass as it undergoes a variety of mechanical loading conditions. Biomass materials, including corn stover, have unique properties that make it challenging to effectively and efficiently feed into thermochemical conversion systems that produce biofuels and bioproducts. These properties include large particle size, fibrous structure, and low density, to name a few. The most common difficulty in creating a system like this for corn stover is plugging within mechanical and pneumatic feeding systems. It is hypothesized that the material properties of fibrous corn stover contribute to its flowability characteristics. By placing different corn stover samples under varying loading conditions, the spectrum of physical properties of this fibrous agricultural residue can be better understood to analyze these previous issues. First, several corn stalk samples were placed in a three-point bending apparatus in order to analyze the energy requirements to chop a stalk, as well as to obtain a quantitative value for the fiber strength and resistance. This is important to make chopping operations more efficient. Then, a bulk solid shearing test was performed in order to determine some of the fluid-like properties associated with chopped biomass, such as internal friction. This is one of the properties that lead to consistent plugging in a piping system. By combining these two tests with future studies, a material database can be created for fibrous corn stover in order to better understand their flow and feeding characteristics.
Efficacy of botanical oils, plant powders and extracts against Callosobruchus chinensis Linn. aitacking blackgram (cv. T9)

Field: Agricultural and Biological Sciences (Life Sciences)

Efficacy of nine different vegetable oils, eight plant powders and three plant extracts each at four concentrations against pulse beetle, Callosobruchus chinensis (Linn.) infesting black gram (Cv. T9) was studied. All the oil treatment were superior in protecting the seeds from pulse beetle attack than malathion treatment or control. Oils of neem, castor and coconut at both the doses i.e. 2 and 4 ml/kg proved most effective in protecting the seeds for about nine months after treatment. Among the plant powders Lantana camera and Tridex procumbens at 2 and 4% (w/w) concentrations and Lantana camera extracts at all the four concentrations were promising in protecting the seeds. Use of such botanical products did not affect the germinability of seeds.
Myosin LightChain 12b and MASP1 as Novel BiomarkerCandidates in Active Juvenile Idiopathic ArthritisA CombinedProteomics/Bioinformatics Approach

Field: Medicine (Health Sciences)

Current diagnostic methods for JIA lack specificity, often failing to distinguish it from other childhood diseases of similar clinical presentations. The present study is a comparative cross-sectional study that identified potential biomarkers using label-free mass spectrometry and bioinformatics. Two differentially expressed proteins (DEPs), Myosin light chain 12b (Myl12b) and Mannose-binding lectin serine protease 1 (MASP1), showed increased expression in JIA patients. Receiver operating characteristic (ROC) analysis revealed strong predictive power (AUC: Myl12b = 0.757, MASP1 = 0.855), validated in a separate cohort via Western blot and ELISA. These findings suggest Myl12b and MASP1 as promising biomarkers for JIA diagnosis and treatment. Data: ProteomeXchange (PXD058863).
Luminescence properties of Eu3+-activated TbAlO3 perovskite compound synthesized by metal organic decomposition

Field: Materials Science (Physical Sciences)

Eu3+-activated TbAlO3 perovskite (TAP:Eu3+) phosphor was synthesized by metal organic decomposition and subsequent calcination at Tc = 1200 °C in air. The luminescence properties of the TAP:Eu3+ phosphor were investigated in detail by photoluminescence (PL) spectroscopy and PL excitation (PLE) spectroscopy, together with PL decay measurements. The PLE spectra and PL decay behaviors of the Eu3+ and Tb3+ emissions showed evidence of resonant energy transfer from the TAG host (Tb3+) to Eu3+. The temperature dependence of the Eu3+ emission intensity was measured at T = 10–450 K and analyzed using the conventional quenching model with the addition of the phonon occupation number term, which was promising for gaining the parity-forbidden Eu3+ transition intensity. This study was also focused on a lattice site of the Eu3+ dopant ions substituting whether for the A-site (Tb3+) or B-site (Al3+) in the TAP lattice. The Stark splitting of the 5D0 to 7FJ level transitions suggests that the Eu3+ ions are substituted for the A-site with the point symmetry Cs.
Suberitenones A and B: Sesterterpenoids of an unprecedented skeletal class from the Antarctic sponge Suberites sp.

Field: Chemistry (Physical Sciences)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTSuberitenones A and B: Sesterterpenoids of an unprecedented skeletal class from the Antarctic sponge Suberites sp.Jongheon Shin, Youngwan Seo, Jung-Rae Rho, Eunjoo Baek, Byoung-Mog Kwon, Tae-Sook Jeong, and Song-Hae BokCite this: J. Org. Chem. 1995, 60, 23, 7582–7588Publication Date (Print):November 1, 1995Publication History Published online1 May 2002Published inissue 1 November 1995https://pubs.acs.org/doi/10.1021/jo00128a034https://doi.org/10.1021/jo00128a034research-articleACS PublicationsRequest reuse permissionsArticle Views304Altmetric-Citations36LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-AlertscloseSupporting Info (2)»Supporting Information Supporting Information Get e-Alerts
[The significance of haptoglobin in the differential diagnosis of tuberculosis of the female genital organs].

Field: Medicine (Health Sciences)

Study included 115 women with suspicion of genital tuberculosis. Combined clinical, X-ray and laboratory examination made it possible to classify patients into 3 groups: group 1 included 44 patients with active genital tuberculosis, group 2 32 women with clinically cured tuberculosis of internal genitalia and group 3 39 women with nonspecific genital diseases. The haptoglobin-tuberculin test was given to all patients. High haptoglobin parameters before or 72 h after tuberculin administration were found only in the group of patients with active genital tuberculosis. In groups 2 and 3 the haptoglobin level did not exceed normal values both before and after tuberculin administration in a dose of 50 TU. The informative value of serum haptoglobin parameters in patients with active tuberculosis of internal genitalia constituted 88.6%.
An Electron Microscopic Study of Human γG1 Immunoglobulin Crystals

Field: Immunology and Microbiology (Life Sciences)

Abstract Crystals of a human γG1 immunoglobulin molecule have been examined in an electron microscope. The micrograph exhibits periodicities in several directions corresponding to the repeating unit in the crystal lattice. A series of two optical integrations of the micrograph in two directions virtually eliminates the random noise and the repeating molecules become clearly visible. The overall appearance of the molecule is characterized by three globular units, presumably corresponding to one Fc and two Fab portions. These units are assembled to give a complete molecule having a form ranging from a Y to a T. This is in agreement with previous electron microscope studies and with the x-ray diffraction studies of these crystals.
Supplementary Figure S2 from Antibody–Drug Conjugate Sacituzumab Govitecan Enables a Sequential TOP1/PARP Inhibitor Therapy Strategy in Patients with Breast Cancer

Field: Pharmacology, Toxicology and Pharmaceutics (Life Sciences)

<p>Figure S2. Concurrent vs. sequential SG/talazoparib (TZP) in normal and tumor cells</p>
Chorda tympani trauma--how much does it affect taste?

Field: Medicine (Health Sciences)

The chorda tympani nerve runs just beneath the tympanic membrane, and is often traumatised or sacrificed during middle ear surgery. There is varied opinion as to whether surgeons should preserve this nerve, risking trauma to it in the process, or cleanly sacrifice it, which some authors claim produces less trauma and less troubling dysgeusia. We studied 31 patients retrospectively to document their taste change following middle ear surgery, and found that in many instances, taste change caused by the operation recovered in the course of time. However, when the chorda was sacrificed, there was a 31% increased incidence of permanent taste change.
Mating, blood feeding, and oviposition of Simulium damnosum Theobald in the laboratory.

Field: Agricultural and Biological Sciences (Life Sciences)

The development of suitable techniques for colonizing the vectors of human onchocerciasis in the laboratory would facilitate critical studies on many aspects of their biology. Progress towards this end, however, has until now been prevented by the fact that no African simuliid had been induced to mate in captivity. The main vector of human onchocerciasis in Africa is Simulium damnosum, which exists in a number of different forms, some but not all of which bite man. During the present investigations one form of S. damnosum, the "Kibwezi" form, was successfully induced to mate, to blood-feed, and to lay viable eggs in the laboratory. The methods described should be tested on other forms of S. damnosum, especially the anthropophilic forms responsible for the transmission of Onchocerca volvulus.
42. Paramedic Evaluation of Clinical Indicators of Cervical Spine Injury

Field: Health Professions (Health Sciences)

Purpose : Standard prehospital practice includes frequent immobilization of blunt trauma patients, some based solely on mechanism. Unnecessary cervical spine (c-spine) immobilization does have disadvantages, including morbidity such as low back pain and splinting, increased scene time and costs, and patient-paramedic conflict. Emergency physicians (EPs) use clinical criteria to clear trauma patients of c-spine injury. If paramedics were able to apply clinical criteria in the out-of-hospital setting, then unnecessary c-spine immobilization could be safely avoided. We designed a prospective, randomized, simulated trial to determine the level of agreement between paramedic and EP assessment of clinical indicators of cervical spine injury. We hypothesized that there would be substantial agreement between paramedic and EP evaluation of standardized patients. Methods : A convenience sample of ten paramedics and ten attending EPs participated. Ten standardized patients, with various combinations of positive and negative findings, were examined simultaneously by EP-paramedic pairs. Each pair evaluated five randomly assigned patients for six clinical criteria, which were: 1) alteration in consciousness, 2) evidence of intoxication, 3) complaint of neck pain, 4) cervical tenderness, 5) neurologic deficit or complaint, and 6) distracting injury. If any criterion was positive, that was considered an immobilization decision. The kappa statistic was utilized to determine level of agreement between the two groups for each individual criterion and for the immobilization decision. A kappa of 0.40 to 0.75 denotes good reproducibility and >0.75 denotes excellent reproducibility.
Recognition and management of genital chlamydial infection.

Field: Medicine (Health Sciences)

Chlamydia trachomatis is widely prevalent.It is an obligate intracellular bacterial parasite whose genital strains (genital chlamydiae) are immunologically and epidemiologically distinct from the ocular strains that cause classical trachoma.'These are transmitted from eye to eye in hot, dry climates, particularly when standards of hygiene are low, but genital chlamydiae are sexually transmitted, and can often be isolated from patients attending venereal disease (VD) clinics in Western countries.Although the conjunctivae may be infected by genital chlamydiae both in neonates, who acquire the infection during parturition, and in adults, through the accidental transfer of infected material to the eye, eye-to-eye infections are rare."Non-specific" genital infection-that is, non-gonococcal urethritis (NGU) in men, and the various syndromes in both sexes associated with it-is now a major health problem in Western society.2The role of genital chlamydiae in the pathogenesis of these diseases has now been recognised,3 and the development of sensitive and reliable cell-culture methods for isolating them4-' has led to intensive reseprch into their epi- demiology and pathogenicity in the human gea.;al tract.As a result, groups particularly prone to infection have been identified.This knowledge has produced a dilemma for both the venereologist and the medical microbiologist, partly because the isolation technique, though feasible in specialist centres, is time-consuming and labour-intensive, and therefore unsuitable for widespread screening of patients attending VD clinics.Nevertheless, genital chlamydiae have been implicated as an important cause of "non-specific" genital infections which should therefore be identified and treated in the interests of patients and the community as a whole.Although much still needs to be learnt about these infections, enough information is available to allow us to try to define where available diagnostic facilities should be concentrated, and also to rationalise the management and treatment of these infections.We also aimed at highlighting particular difficulties in management and treatment.
Experimental Model of Suit Therapy with Traction Bands in VertebralBone Remodeling in Wistar Rats

Field: Medicine (Health Sciences)

Objectives: Osteopenia and osteoporosis are quite prevalent in children with Cerebral Palsy and the percentage of these children with a history of fractures is high. In the past decade there have been methods and protocols within the suit therapy characterized by garments with adjustable elastic bands and the possibility of applying load on the human skeleton for improved bone mineral density. The aim of this study was to analyze the histomorphometric bone of dorsal and lumbar vertebrae, and to quantify serum levels of osteocalcin, after using an experimental model of suit therapy in Wistar rats.
Methods: The sample included 30 male Wistar rats. It was made for animals, an experimental model of the “suit”, adapted and arranged in two elastic “X” to approach the spine by means of traction load resulting in 50% of the weight of the animal. They remained two hours daily with the suit, 5 consecutive days and four weeks of trial, a total of 40 hours.
Results: There was no statistical result for cortical thickness, and osteocytes counts and percentages of the trabecular porous area in the dorsal and lumbar vertebrae.
Conclusion: There was no change in bone tissue of the dorsal and lumbar vertebrae with the spinal compression performed by the traction bands of the suit in this experimental model.
Solanum hybr., WKS 32620

Field: Agricultural and Biological Sciences (Life Sciences)

PGRFA accession of IPK Gatersleben Plant Genetic Resource Taxon: Solanum hybr. Accession number: WKS 32620 Conserved by: DEU159 Acquisition: 1963 Origin country: BOL Biological status: Traditional cultivar/landrace MLS status: Included AEGIS status: Included Historic: No
Reproductive outcomes and Y chromosome instability in radiation‐exposed male workers in cardiac catheterization laboratory

Field: Medicine (Health Sciences)

Occupational radiation exposure may impact the reproductive outcome of male workers in the cardiac catheterization laboratory (cath Lab) who receive a dose of ~1–10 mSv/year. An increased copy number variation (CNV) in azoospermia factor region c (AZFc) of the Y chromosome is a marker of spermatogenic failure, previously associated with radiation exposure. This study sought to investigate the association between paternal exposure in the Cath Lab and adverse reproductive outcomes as well as to assess the induction of CNV in the AZFc region. In a case–control study, we enrolled 193 catheterization lab workers (Group I) and 164 age‐matched unexposed controls (Group II). Reproductive outcomes were assessed through a structured questionnaire. Two sequence‐tagged sites (SY1197 and SY579) in AZFc region were evaluated by qRT‐PCR in 83 exposed and 47 unexposed subjects. Exposed workers had a higher prevalence of low birth weight in offspring (Group I = 13% vs. II = 5.3%, P = 0.02; OR adjusted = 2.7; 95% CI: 1.1–6.3; P = 0.02). The mean of CNV (microdeletion and microduplication) for SY1197 was significantly higher in the exposed workers (Group I = 1.53 ± 0.85 vs. Group II = 1.02 ± 0.41; P = 0.0005). Despite the study design limitations, our findings show that chronic occupational radiation exposure of male workers is correlated with higher prevalence of low birth weight in offspring and instability in the Y chromosome AZFc region. Environ. Mol. Mutagen. 61:361–368, 2020. © 2019 Wiley Periodicals, Inc.
Factors related to self‐reported violent and accidental injuries

Field: Medicine (Health Sciences)

Abstract The main objective of this study is to gain a better understanding of factors that distinguish violent and accidental injuries. A secondary analysis was conducted on data from a randomized telephone survey of 10 385 Canadian residents. Three groups were compared using chi‐square tests and logistic regression analyses: respondents who reported no injuries in the previous year, those with at least one accidental injury and those with at least one violent injury. In the bivariate analyses, the violent injury group was significantly more likely than the accidental injury and non‐injury groups to be single, widowed, separated or divorced, have more than five drinks on a usual drinking occasion, experience harmful effects of alcohol and to have used illicit drugs, such as cocaine and marijuana, and licit drugs, such as antidepressants and sleeping pills. Finally, the violent injury group was significantly more likely than those with non‐violent injuries to report that the incident was related to either their own or someone else's alcohol or drug use. In the final multiple logistic regression analysis, variables significantly associated with injuries due to criminal victimizations compared with accidental injuries were being female, single, cocaine use of the injured and substance use of someone else during the injury.