Plant bioinformatics : methods and protocols The EMBL nucleotide sequence and genome reviews databases Peter Sterk ... [et al.] Using GenBank David Wheeler A collection of plant specific genomic data and resources at NCBI Tatiana Tatusova Brian Smith White and James Ostell UniProtKB Swiss Prot Emmanuel Boutet ... [et al.] Plant database resources at The Institute for Genomic Research Agnes P. Chan... [et al.] MIPS plant genome information resources Manuel Spannagl ...[et al.] HarvEST Timothy J. Close ... [et al.] The TAIR database Rebecca L. Poole AtEnsEMBL Nick James ... [et al.] Accessing integrated Brassica genetic and genomic data using the BASC server Christopher G. Love and David Edwards Leveraging model legume information to find candidate genes for soybean sudden death syndrome using the Legume Information System Michael D. Gonzales ... [et al.] Legume resources : MtDB and Medicago.org Ernest F. Retzel ... [et al.] BGI RIS V2 Ximiao He and Jun Wang GrainGenes Helen OSullivan Gramene Doreen Ware MaizGDB Carolyn J. Lawrence BarleyBase PLEXdb Roger P. Wise ... [et al.] Reaping the benefits of SAGE Stephen J. Robinson ... [et al.] Methods for analysis of gene expression in plants using MPSS Kan Nobuta Kalyan Vemaraju and Blake C. Meyers Metabolomics data analysis visualization and integration Lloyd W. Sumner Ewa Urbanczyk Wochniak and Corey D. Broeckling KEGG bioinformatics resource for plant genomics research Ali Masoudi Nejad ... [et al.] International Crop Information System for germplasms data management Arllet Portugal ... [et al.] Automated discovery of single nucleotide polymorphism and simple sequence repeat molecular genetic markers Jacqueline Batley Erica Jewell and David Edwards Methods for gene ontology annotation Emily Dimmer ... [et al.] Gene structure annotation at PlantGDB Volker Brendel An introduction to BioPerl Jason E. Stajich