Analysis of categorical data with R We live in a categorical world! From a positive or negative disease diagnosis to choosing all items that apply in a survey outcomes are frequently organized into categories so that people can more easily make sense of them. However analyzing data from categorical responses requires specialized techniques beyond those learned in a rst or second course in Statistics. We o er this book to help students and researchers learn how to properly analyze categorical data. Unlike other texts on similar topics our book is a modern account using the vastly popular R software. We use R not only as a data analysis method but also as a learning tool. For example we use data simulation to help readers understand the underlying assumptions of a procedure and then to evaluate that procedures performance. We also provide numerous graphical demonstrations of the features and properties of various analysis methods. The focus of this book is on the analysis of data rather than on the mathematical development of methods. We o er numerous examples from a wide rage of disciplines medicine psychology sports ecology and others and provide extensive R code and output as we work through the examples. We give detailed advice and guidelines regarding which procedures to use and why to use them. While we treat likelihood methods as a tool they are not used blindly. For example we write out likelihood functions and explain how they are maximized. We describe where Wald likelihood ratio and score procedures come from. However except in Appendix B where we give a general introduction to likelihood methods we do not frequently emphasize calculus or carry out mathematical analysis in the text. The use of calculus is mostly from a conceptual focus rather than a mathematical one