Gibbs measures in biology and physics : the Potts model This book presents recently obtained mathematical results on Gibbs measures of the q state Potts model on the integer lattice and on Cayley trees. It also illustrates many applications of the Potts model to real world situations in biology physics financial engineering medicine and sociology as well as in some examples of alloy behavior cell sorting flocking birds flowing foams and image segmentation. Gibbs measure is one of the important measures in various problems of probability theory and statistical mechanics. It is a measure associated with the Hamiltonian of a biological or physical system. Each Gibbs measure gives a state of the system. The main problem for a given Hamiltonian on a countable lattice is to describe all of its possible Gibbs measures. The existence of some values of parameters at which the uniqueness of Gibbs measure switches to non uniqueness is interpreted as a phase transition. This book informs the reader about what has been (mathematically) done in the theory of Gibbs measures of the Potts model and the numerous applications of the Potts model. The main aim is to facilitate the readers (in mathematical biology statistical physics applied mathematics probability and measure theory) to progress into an in depth understanding by giving a systematic review of the theory of Gibbs measures of the Potts model and its applications