Repository: mne-tools/mne-python

Issue:
run make linkcheck in doc
```
cd doc
make linkcheck
```

and you'll see some red lines about broken links etc...

Full log on my machine:

```
writing output... [  0%] _templates/class
writing output... [  0%] _templates/function
writing output... [  0%] advanced_setup
(line   46) ok        https://developer.nvidia.com/cuda-downloads
(line   50) ok        http://wiki.tiker.net/PyCuda/Installation/
(line   48) ok        http://mathema.tician.de/software/pycuda
(line   52) ok        https://github.com/lebedov/scikits.cuda
writing output... [  0%] auto_examples/connectivity/plot_cwt_sensor_connectivity
writing output... [  1%] auto_examples/connectivity/plot_mne_inverse_coherence_epochs
writing output... [  1%] auto_examples/connectivity/plot_mne_inverse_connectivity_spectrum
writing output... [  1%] auto_examples/connectivity/plot_mne_inverse_label_connectivity
writing output... [  1%] auto_examples/connectivity/plot_mne_inverse_psi_visual
writing output... [  2%] auto_examples/connectivity/plot_sensor_connectivity
writing output... [  2%] auto_examples/datasets/plot_megsim_data
writing output... [  2%] auto_examples/datasets/plot_megsim_data_single_trial
writing output... [  2%] auto_examples/datasets/plot_spm_faces_dataset
writing output... [  3%] auto_examples/debug_proj
writing output... [  3%] auto_examples/decoding/plot_decoding_csp_eeg
(line   13) ok        http://en.wikipedia.org/wiki/Common_spatial_pattern
writing output... [  3%] auto_examples/decoding/plot_decoding_csp_space
writing output... [  3%] auto_examples/decoding/plot_decoding_sensors
writing output... [  4%] auto_examples/decoding/plot_decoding_spatio_temporal_source
writing output... [  4%] auto_examples/decoding/plot_decoding_time_generalization
writing output... [  4%] auto_examples/decoding/plot_ems_filtering
writing output... [  4%] auto_examples/export/plot_epochs_as_data_frame
(line   89) ok        http://pandas.pydata.org/pandas-docs/stable/
writing output... [  5%] auto_examples/export/plot_epochs_to_nitime
writing output... [  5%] auto_examples/export/plot_evoked_to_nitime
writing output... [  5%] auto_examples/export/plot_raw_to_nitime
writing output... [  5%] auto_examples/index
(line   41) -local-   ./plot_bem_contour_mri.html
(line   41) -local-   ./plot_ssp_projs_topomaps.html
(line   41) -local-   ./plot_coregistration_transform.html
(line   41) -local-   ./plot_read_noise_covariance_matrix.html
(line   41) -local-   ./read_events.html
(line   41) -local-   ./plot_read_evoked.html
(line   41) -local-   ./plot_topography.html
(line   41) -local-   ./plot_meg_eeg_fields_3d.html
(line   41) -local-   ./plot_decimate_head_surface.html
(line   41) -local-   ./plot_estimate_covariance_matrix_raw.html
(line   41) -local-   ./plot_extract_events_from_raw.html
(line   41) -local-   ./plot_ssp_projs_sensitivity_map.html
(line   41) -local-   ./plot_read_bem_surfaces.html
(line   41) -local-   ./plot_read_and_write_raw_data.html
(line   41) -local-   ./plot_evoked_topomap.html
(line   41) -local-   ./plot_read_epochs.html
(line   41) -local-   ./plot_shift_evoked.html
(line   41) -local-   ./plot_interpolate_bad_channels.html
(line   41) -local-   ./plot_topo_channel_epochs_image.html
(line   41) -local-   ./plot_estimate_covariance_matrix_baseline.html
(line   41) -local-   ./debug_proj.html
(line   41) -local-   ./plot_evoked_topomap_delayed_ssp.html
(line   41) -local-   ./plot_topo_customized.html
(line   41) -local-   ./plot_channel_epochs_image.html
(line   41) -local-   ./plot_rereference_eeg.html
(line   41) -local-   ./plot_read_forward.html
(line   41) -local-   ./plot_topo_compare_conditions.html
(line   41) -local-   ./plot_evoked_whitening.html
(line   41) -local-   ./plot_from_raw_to_multiple_epochs_to_evoked.html
(line   41) -local-   ./plot_make_forward.html
(line   41) -local-   ./plot_from_raw_to_epochs_to_evoked.html
(line   41) -local-   ./plot_evoked_delayed_ssp.html
(line   41) -local-   ./plot_define_target_events.html
(line   41) -local-   ./plot_simulate_evoked_data.html
(line   41) -local-   ./plot_left_cerebellum_volume_source.html
(line  897) -local-   ./connectivity/plot_cwt_sensor_connectivity.html
(line  897) -local-   ./connectivity/plot_mne_inverse_connectivity_spectrum.html
(line  897) -local-   ./connectivity/plot_mne_inverse_psi_visual.html
(line  897) -local-   ./connectivity/plot_mne_inverse_coherence_epochs.html
(line  897) -local-   ./connectivity/plot_sensor_connectivity.html
(line  897) -local-   ./connectivity/plot_mne_inverse_label_connectivity.html
(line 1057) -local-   ./datasets/plot_megsim_data_single_trial.html
(line 1057) -local-   ./datasets/plot_megsim_data.html
(line 1057) -local-   ./datasets/plot_spm_faces_dataset.html
(line 1144) -local-   ./decoding/plot_ems_filtering.html
(line 1144) -local-   ./decoding/plot_decoding_time_generalization.html
(line 1144) -local-   ./decoding/plot_decoding_sensors.html
(line 1144) -local-   ./decoding/plot_decoding_csp_space.html
(line 1144) -local-   ./decoding/plot_decoding_csp_eeg.html
(line 1144) -local-   ./decoding/plot_decoding_spatio_temporal_source.html
(line 1303) -local-   ./export/plot_evoked_to_nitime.html
(line 1303) -local-   ./export/plot_epochs_to_nitime.html
(line 1303) -local-   ./export/plot_raw_to_nitime.html
(line 1303) -local-   ./export/plot_epochs_as_data_frame.html
(line 1414) -local-   ./inverse/plot_read_stc.html
(line 1414) -local-   ./inverse/plot_read_source_space.html
(line 1414) -local-   ./inverse/plot_read_inverse.html
(line 1414) -local-   ./inverse/plot_compute_mne_inverse_raw_in_label.html
(line 1414) -local-   ./inverse/plot_morph_data.html
(line 1414) -local-   ./inverse/plot_compute_mne_inverse_volume.html
(line 1414) -local-   ./inverse/plot_label_activation_from_stc.html
(line 1414) -local-   ./inverse/plot_label_source_activations.html
(line 1414) -local-   ./inverse/plot_compute_mne_inverse.html
(line 1414) -local-   ./inverse/plot_gamma_map_inverse.html
(line 1414) -local-   ./inverse/plot_mixed_norm_L21_inverse.html
(line 1414) -local-   ./inverse/plot_dics_source_power.html
(line 1414) -local-   ./inverse/plot_dipole_fit_result.html
(line 1414) -local-   ./inverse/plot_mne_crosstalk_function.html
(line 1414) -local-   ./inverse/plot_dics_beamformer.html
(line 1414) -local-   ./inverse/plot_lcmv_beamformer.html
(line 1414) -local-   ./inverse/plot_make_inverse_operator.html
(line 1414) -local-   ./inverse/plot_lcmv_beamformer_volume.html
(line 1414) -local-   ./inverse/plot_mne_point_spread_function.html
(line 1414) -local-   ./inverse/plot_time_frequency_mixed_norm_inverse.html
(line 1414) -local-   ./inverse/plot_label_from_stc.html
(line 1414) -local-   ./inverse/plot_tf_dics.html
(line 1414) -local-   ./inverse/plot_compute_mne_inverse_epochs_in_label.html
(line 1414) -local-   ./inverse/plot_tf_lcmv.html
(line 1414) -local-   ./inverse/plot_covariance_whitening_dspm.html
(line 2031) -local-   ./preprocessing/plot_find_eog_artifacts.html
(line 2031) -local-   ./preprocessing/plot_find_ecg_artifacts.html
(line 2031) -local-   ./preprocessing/plot_eog_artifact_histogram.html
(line 2031) -local-   ./preprocessing/plot_ica_from_epochs.html
(line 2031) -local-   ./preprocessing/plot_ica_from_raw.html
(line 2166) -local-   ./realtime/plot_compute_rt_average.html
(line 2166) -local-   ./realtime/ftclient_rt_compute_psd.html
(line 2166) -local-   ./realtime/ftclient_rt_average.html
(line 2166) -local-   ./realtime/rt_feedback_client.html
(line 2166) -local-   ./realtime/plot_compute_rt_decoder.html
(line 2166) -local-   ./realtime/rt_feedback_server.html
(line 2326) -local-   ./stats/plot_sensor_regression.html
(line 2326) -local-   ./stats/plot_sensor_permutation_test.html
(line 2326) -local-   ./stats/plot_fdr_stats_evoked.html
(line 2326) -local-   ./stats/plot_cluster_stats_evoked.html
(line 2326) -local-   ./stats/plot_cluster_stats_spatio_temporal_2samp.html
(line 2326) -local-   ./stats/plot_cluster_1samp_test_time_frequency.html
(line 2326) -local-   ./stats/plot_cluster_stats_time_frequency.html
(line 2326) -local-   ./stats/plot_spatio_temporal_cluster_stats_sensor.html
(line 2326) -local-   ./stats/plot_cluster_methods_tutorial.html
(line 2326) -local-   ./stats/plot_cluster_stats_spatio_temporal.html
(line 2326) -local-   ./stats/plot_cluster_stats_time_frequency_repeated_measures_anova.html
(line 2326) -local-   ./stats/plot_cluster_stats_spatio_temporal_repeated_measures_anova.html
(line 2630) -local-   ./time_frequency/plot_stockwell.html
(line 2630) -local-   ./time_frequency/plot_time_frequency_multitaper_sensors.html
(line 2630) -local-   ./time_frequency/plot_source_power_spectrum.html
(line 2630) -local-   ./time_frequency/plot_temporal_whitening.html
(line 2630) -local-   ./time_frequency/plot_source_space_time_frequency.html
(line 2630) -local-   ./time_frequency/plot_time_frequency_sensors.html
(line 2630) -local-   ./time_frequency/plot_compute_raw_data_spectrum.html
(line 2630) -local-   ./time_frequency/plot_compute_source_psd_epochs.html
(line 2630) -local-   ./time_frequency/plot_source_label_time_frequency.html
(line 2630) -local-   ./time_frequency/plot_single_trial_spectra.html
(line 2630) -local-   ./time_frequency/plot_time_frequency_simulated.html
(line 2630) -local-   ./time_frequency/plot_stockwellcopy.html
writing output... [  6%] auto_examples/inverse/plot_compute_mne_inverse
writing output... [  6%] auto_examples/inverse/plot_compute_mne_inverse_epochs_in_label
writing output... [  6%] auto_examples/inverse/plot_compute_mne_inverse_raw_in_label
writing output... [  6%] auto_examples/inverse/plot_compute_mne_inverse_volume
writing output... [  7%] auto_examples/inverse/plot_covariance_whitening_dspm
writing output... [  7%] auto_examples/inverse/plot_dics_beamformer
writing output... [  7%] auto_examples/inverse/plot_dics_source_power
writing output... [  7%] auto_examples/inverse/plot_dipole_fit_result
writing output... [  8%] auto_examples/inverse/plot_gamma_map_inverse
writing output... [  8%] auto_examples/inverse/plot_label_activation_from_stc
writing output... [  8%] auto_examples/inverse/plot_label_from_stc
writing output... [  8%] auto_examples/inverse/plot_label_source_activations
writing output... [  9%] auto_examples/inverse/plot_lcmv_beamformer
writing output... [  9%] auto_examples/inverse/plot_lcmv_beamformer_volume
writing output... [  9%] auto_examples/inverse/plot_make_inverse_operator
writing output... [  9%] auto_examples/inverse/plot_mixed_norm_L21_inverse
(line   10) redirect  http://dx.doi.org/10.1088/0031-9155/57/7/1937 - with See Other to http://iopscience.iop.org/0031-9155/57/7/1937/
writing output... [ 10%] auto_examples/inverse/plot_mne_crosstalk_function
writing output... [ 10%] auto_examples/inverse/plot_mne_point_spread_function
writing output... [ 10%] auto_examples/inverse/plot_morph_data
writing output... [ 10%] auto_examples/inverse/plot_read_inverse
writing output... [ 11%] auto_examples/inverse/plot_read_source_space
writing output... [ 11%] auto_examples/inverse/plot_read_stc
writing output... [ 11%] auto_examples/inverse/plot_tf_dics
writing output... [ 11%] auto_examples/inverse/plot_tf_lcmv
writing output... [ 12%] auto_examples/inverse/plot_time_frequency_mixed_norm_inverse
(line   31) redirect  http://dx.doi.org/10.1007/978-3-642-22092-0_49 - with See Other to http://link.springer.com/chapter/10.1007%2F978-3-642-22092-0_49
writing output... [ 12%] auto_examples/plot_bem_contour_mri
writing output... [ 12%] auto_examples/plot_channel_epochs_image
(line   19) redirect  http://hal.inria.fr/inria-00497023 - permanently to https://hal.inria.fr/inria-00497023
writing output... [ 12%] auto_examples/plot_coregistration_transform
writing output... [ 13%] auto_examples/plot_decimate_head_surface
writing output... [ 13%] auto_examples/plot_define_target_events
writing output... [ 13%] auto_examples/plot_estimate_covariance_matrix_baseline
writing output... [ 13%] auto_examples/plot_estimate_covariance_matrix_raw
writing output... [ 14%] auto_examples/plot_evoked_delayed_ssp
writing output... [ 14%] auto_examples/plot_evoked_topomap
writing output... [ 14%] auto_examples/plot_evoked_topomap_delayed_ssp
writing output... [ 14%] auto_examples/plot_evoked_whitening
writing output... [ 15%] auto_examples/plot_extract_events_from_raw
writing output... [ 15%] auto_examples/plot_from_raw_to_epochs_to_evoked
writing output... [ 15%] auto_examples/plot_from_raw_to_multiple_epochs_to_evoked
writing output... [ 15%] auto_examples/plot_interpolate_bad_channels
writing output... [ 16%] auto_examples/plot_left_cerebellum_volume_source
writing output... [ 16%] auto_examples/plot_make_forward
writing output... [ 16%] auto_examples/plot_meg_eeg_fields_3d
writing output... [ 16%] auto_examples/plot_read_and_write_raw_data
writing output... [ 17%] auto_examples/plot_read_bem_surfaces
writing output... [ 17%] auto_examples/plot_read_epochs
writing output... [ 17%] auto_examples/plot_read_evoked
writing output... [ 17%] auto_examples/plot_read_forward
writing output... [ 18%] auto_examples/plot_read_noise_covariance_matrix
writing output... [ 18%] auto_examples/plot_rereference_eeg
writing output... [ 18%] auto_examples/plot_shift_evoked
writing output... [ 18%] auto_examples/plot_simulate_evoked_data
writing output... [ 19%] auto_examples/plot_ssp_projs_sensitivity_map
writing output... [ 19%] auto_examples/plot_ssp_projs_topomaps
writing output... [ 19%] auto_examples/plot_topo_channel_epochs_image
writing output... [ 19%] auto_examples/plot_topo_compare_conditions
writing output... [ 20%] auto_examples/plot_topo_customized
writing output... [ 20%] auto_examples/plot_topography
writing output... [ 20%] auto_examples/preprocessing/plot_eog_artifact_histogram
writing output... [ 20%] auto_examples/preprocessing/plot_find_ecg_artifacts
writing output... [ 21%] auto_examples/preprocessing/plot_find_eog_artifacts
writing output... [ 21%] auto_examples/preprocessing/plot_ica_from_epochs
writing output... [ 21%] auto_examples/preprocessing/plot_ica_from_raw
writing output... [ 21%] auto_examples/read_events
writing output... [ 22%] auto_examples/realtime/ftclient_rt_average
(line   19) ok        http://neuro.hut.fi/~mainak/neuromag2ft-2.0.0.zip
writing output... [ 22%] auto_examples/realtime/ftclient_rt_compute_psd
writing output... [ 22%] auto_examples/realtime/plot_compute_rt_average
writing output... [ 22%] auto_examples/realtime/plot_compute_rt_decoder
writing output... [ 23%] auto_examples/realtime/rt_feedback_client
writing output... [ 23%] auto_examples/realtime/rt_feedback_server
writing output... [ 23%] auto_examples/stats/plot_cluster_1samp_test_time_frequency
writing output... [ 23%] auto_examples/stats/plot_cluster_methods_tutorial
writing output... [ 24%] auto_examples/stats/plot_cluster_stats_evoked
writing output... [ 24%] auto_examples/stats/plot_cluster_stats_spatio_temporal
writing output... [ 24%] auto_examples/stats/plot_cluster_stats_spatio_temporal_2samp
writing output... [ 24%] auto_examples/stats/plot_cluster_stats_spatio_temporal_repeated_measures_anova
writing output... [ 25%] auto_examples/stats/plot_cluster_stats_time_frequency
writing output... [ 25%] auto_examples/stats/plot_cluster_stats_time_frequency_repeated_measures_anova
writing output... [ 25%] auto_examples/stats/plot_fdr_stats_evoked
writing output... [ 25%] auto_examples/stats/plot_sensor_permutation_test
writing output... [ 26%] auto_examples/stats/plot_sensor_regression
writing output... [ 26%] auto_examples/stats/plot_spatio_temporal_cluster_stats_sensor
writing output... [ 26%] auto_examples/time_frequency/plot_compute_raw_data_spectrum
writing output... [ 26%] auto_examples/time_frequency/plot_compute_source_psd_epochs
writing output... [ 27%] auto_examples/time_frequency/plot_single_trial_spectra
writing output... [ 27%] auto_examples/time_frequency/plot_source_label_time_frequency
writing output... [ 27%] auto_examples/time_frequency/plot_source_power_spectrum
writing output... [ 27%] auto_examples/time_frequency/plot_source_space_time_frequency
writing output... [ 28%] auto_examples/time_frequency/plot_stockwell
writing output... [ 28%] auto_examples/time_frequency/plot_stockwell copy
writing output... [ 28%] auto_examples/time_frequency/plot_temporal_whitening
writing output... [ 28%] auto_examples/time_frequency/plot_time_frequency_multitaper_sensors
writing output... [ 29%] auto_examples/time_frequency/plot_time_frequency_sensors
writing output... [ 29%] auto_examples/time_frequency/plot_time_frequency_simulated
writing output... [ 29%] cite
(line   12) redirect  http://www.frontiersin.org/Journal/Abstract.aspx?s=1304&name=brain_imaging_methods&ART_DOI=10.3389/fnins.2013.00267 - permanently to http://journal.frontiersin.org/article/10.3389/fnins.2013.00267/abstract
(line   12) redirect  http://dx.doi.org/10.3389/fnins.2013.00267 - with See Other to http://journal.frontiersin.org/article/10.3389/fnins.2013.00267/abstract
(line    8) ok        http://www.ncbi.nlm.nih.gov/pubmed/24161808
(line    8) redirect  http://dx.doi.org/10.1016/j.neuroimage.2013.10.027 - with See Other to http://www.sciencedirect.com/science/article/pii/S1053811913010501
(line   14) ok        https://zenodo.org/search?ln=en&p=mne-python
writing output... [ 29%] command_line_tutorial
writing output... [ 30%] contributing
(line   20) ok        http://www.continuum.io/downloads
(line   20) ok        http://macromates.com/
(line   20) redirect  http://spyder-ide.blogspot.com/ - with Found to http://spyder-ide.blogspot.fr/
(line   12) redirect  http://github.com/mne-tools/mne-python - permanently to https://github.com/mne-tools/mne-python
(line   20) ok        https://www.enthought.com/products/epd/
(line   20) ok        http://www.sublimetext.com/
(line   20) ok        http://www.sublimetext.com/
(line    7) redirect  http://mne-tools.github.com/mne-python-intro - permanently to http://mne-tools.github.io/mne-python-intro/
(line   26) ok        http://www.scipy.org
(line   28) ok        https://nose.readthedocs.org/en/latest/
(line   28) ok        https://pypi.python.org/pypi/coverage
(line   26) ok        http://matplotlib.org/
(line   26) redirect  http://numpy.scipy.org - permanently to http://www.numpy.org/
(line   28) ok        http://mayavi.sourceforge.net/
(line   28) ok        http://sphinx-doc.org/
(line   28) ok        https://pypi.python.org/pypi/nose-timer
(line   31) ok        http://pysurfer.github.io/
(line   28) redirect  http://pypi.python.org/pypi/pyflakes - permanently to https://pypi.python.org/pypi/pyflakes
(line   31) ok        http://nipy.org/nitime/
(line   31) ok        http://pandas.pydata.org/
(line   31) ok        https://pypi.python.org/pypi/PIL
(line   31) ok        https://pypi.python.org/pypi/joblib
(line   31) ok        https://pypi.python.org/pypi/pydicom/
(line   28) redirect  http://pypi.python.org/pypi/pep8 - permanently to https://pypi.python.org/pypi/pep8
(line   31) ok        http://nipy.org/nibabel
(line   42) redirect  http://pypi.python.org/pypi/pep8 - permanently to https://pypi.python.org/pypi/pep8
(line   42) redirect  http://pypi.python.org/pypi/pyflakes - permanently to https://pypi.python.org/pypi/pyflakes
(line   42) redirect  http://spyder-ide.blogspot.com/ - with Found to http://spyder-ide.blogspot.fr/
(line   31) redirect  http://h5py.org - permanently to http://www.h5py.org/
(line   31) ok        http://scikit-learn.org/stable/
(line   34) ok        http://www.nmr.mgh.harvard.edu/martinos/userInfo/data/MNE_register/
(line  132) ok        http://scikit-learn.org/stable/developers/performance.html#performance-howto
(line   58) ok        https://github.com/numpy/numpy/blob/master/doc/HOWTO_DOCUMENT.rst.txt
(line  168) redirect  http://mne-tools.github.com/mne-python-intro - permanently to http://mne-tools.github.io/mne-python-intro/
(line   34) ok        http://surfer.nmr.mgh.harvard.edu/fswiki/DownloadAndInstall/
(line  192) redirect  http://github.com/mne-tools/mne-python - permanently to https://github.com/mne-tools/mne-python
(line  198) redirect  http://mne-tools.github.com/mne-python-intro - permanently to http://mne-tools.github.io/mne-python-intro/
(line  240) redirect  http://mne-tools.github.com/mne-python-intro - permanently to http://mne-tools.github.io/mne-python-intro/
(line  137) redirect  http://astropy.org - permanently to http://www.astropy.org/
(line  154) redirect  http://help.github.com/ - permanently to https://help.github.com/
(line  168) redirect  http://help.github.com/fork-a-repo/ - permanently to https://help.github.com/fork-a-repo/
(line  181) redirect  http://help.github.com - permanently to https://help.github.com/
(line  291) ok        http://mail.scipy.org/pipermail/ipython-dev/2010-October/006746.html
(line  310) ok        http://mail.scipy.org/pipermail/ipython-dev/2010-October/006746.html
(line  315) redirect  http://matthew-brett.github.com/pydagogue/gh_delete_master.html - permanently to http://matthew-brett.github.io/pydagogue/gh_delete_master.html
(line  302) ok        https://travis-ci.org/
(line  358) redirect  http://github.com - permanently to https://github.com/
(line  310) ok        http://www.mail-archive.com/dri-devel@lists.sourceforge.net/msg39091.html
(line  411) redirect  http://schacon.github.com/git/git-add.html - permanently to http://schacon.github.io/git/git-add.html
(line  414) redirect  http://schacon.github.com/git/git-add.html - permanently to http://schacon.github.io/git/git-add.html
(line  358) redirect  http://schacon.github.com/git/git-push.html - permanently to http://schacon.github.io/git/git-push.html
(line  469) redirect  http://mne-tools.github.com/mne-python-intro - permanently to http://mne-tools.github.io/mne-python-intro/
(line  393) redirect  http://schacon.github.com/git/git-status.html - permanently to http://schacon.github.io/git/git-status.html
(line  432) redirect  http://schacon.github.com/git/git-push.html - permanently to http://schacon.github.io/git/git-push.html
(line  575) redirect  http://matthew-brett.github.com/pydagogue/rebase_without_tears.html - permanently to http://matthew-brett.github.io/pydagogue/rebase_without_tears.html
(line  409) redirect  http://schacon.github.com/git/git-diff.html - permanently to http://schacon.github.io/git/git-diff.html
(line  425) redirect  http://schacon.github.com/git/git-commit.html - permanently to http://schacon.github.io/git/git-commit.html
(line  535) redirect  http://github.com/blog/39-say-hello-to-the-network-graph-visualizer - permanently to https://github.com/blog/39-say-hello-to-the-network-graph-visualizer
(line  490) redirect  http://github.com/guides/remove-a-remote-branch - permanently to https://help.github.com/remotes/
(line  781) ok        https://github.com/mne-tools/mne-scripts/
(line  603) redirect  http://schacon.github.com/git/git-rebase.html - permanently to http://schacon.github.io/git/git-rebase.html
(line  603) redirect  http://schacon.github.com/git/user-manual.html#resolving-a-merge - permanently to http://schacon.github.io/git/user-manual.html#resolving-a-merge
writing output... [ 30%] customizing_git
(line   57) ok        http://git-scm.com/
(line   12) ok        http://git-scm.com/
writing output... [ 30%] generated/mne.BiHemiLabel
writing output... [ 30%] generated/mne.Covariance
writing output... [ 31%] generated/mne.Dipole
writing output... [ 31%] generated/mne.Epochs
writing output... [ 31%] generated/mne.EpochsArray
writing output... [ 31%] generated/mne.Evoked
writing output... [ 32%] generated/mne.EvokedArray
writing output... [ 32%] generated/mne.Label
writing output... [ 32%] generated/mne.MixedSourceEstimate
writing output... [ 32%] generated/mne.SourceEstimate
writing output... [ 33%] generated/mne.SourceSpaces
writing output... [ 33%] generated/mne.VolSourceEstimate
writing output... [ 33%] generated/mne.add_source_space_distances
writing output... [ 33%] generated/mne.apply_forward
writing output... [ 34%] generated/mne.apply_forward_raw
writing output... [ 34%] generated/mne.average_forward_solutions
writing output... [ 34%] generated/mne.beamformer.dics
writing output... [ 34%] generated/mne.beamformer.dics_epochs
writing output... [ 35%] generated/mne.beamformer.dics_source_power
writing output... [ 35%] generated/mne.beamformer.lcmv
writing output... [ 35%] generated/mne.beamformer.lcmv_epochs
writing output... [ 35%] generated/mne.beamformer.lcmv_raw
writing output... [ 36%] generated/mne.channels.apply_montage
writing output... [ 36%] generated/mne.channels.equalize_channels
writing output... [ 36%] generated/mne.channels.find_layout
writing output... [ 36%] generated/mne.channels.make_eeg_layout
writing output... [ 37%] generated/mne.channels.make_grid_layout
writing output... [ 37%] generated/mne.channels.read_ch_connectivity
(line    5) ok        http://fieldtrip.fcdonders.nl/template/neighbours
writing output... [ 37%] generated/mne.channels.read_layout
writing output... [ 37%] generated/mne.channels.read_montage
writing output... [ 38%] generated/mne.channels.rename_channels
writing output... [ 38%] generated/mne.combine_evoked
writing output... [ 38%] generated/mne.compute_covariance
writing output... [ 38%] generated/mne.compute_morph_matrix
writing output... [ 39%] generated/mne.compute_proj_epochs
writing output... [ 39%] generated/mne.compute_proj_evoked
writing output... [ 39%] generated/mne.compute_proj_raw
writing output... [ 39%] generated/mne.compute_raw_data_covariance
writing output... [ 40%] generated/mne.concatenate_events
writing output... [ 40%] generated/mne.concatenate_raws
writing output... [ 40%] generated/mne.connectivity.phase_slope_index
writing output... [ 40%] generated/mne.connectivity.seed_target_indices
writing output... [ 41%] generated/mne.connectivity.spectral_connectivity
writing output... [ 41%] generated/mne.convert_forward_solution
writing output... [ 41%] generated/mne.create_default_subject
writing output... [ 41%] generated/mne.create_info
writing output... [ 42%] generated/mne.cuda.init_cuda
writing output... [ 42%] generated/mne.datasets.megsim.data_path
writing output... [ 42%] generated/mne.datasets.megsim.load_data
writing output... [ 42%] generated/mne.datasets.sample.data_path
writing output... [ 43%] generated/mne.datasets.spm_face.data_path
writing output... [ 43%] generated/mne.decimate_surface
writing output... [ 43%] generated/mne.decoding.CSP
writing output... [ 43%] generated/mne.decoding.ConcatenateChannels
writing output... [ 44%] generated/mne.decoding.FilterEstimator
writing output... [ 44%] generated/mne.decoding.PSDEstimator
writing output... [ 44%] generated/mne.decoding.Scaler
writing output... [ 44%] generated/mne.do_forward_solution
writing output... [ 45%] generated/mne.epochs.add_channels_epochs
writing output... [ 45%] generated/mne.epochs.combine_event_ids
writing output... [ 45%] generated/mne.epochs.concatenate_epochs
writing output... [ 45%] generated/mne.epochs.equalize_epoch_counts
writing output... [ 46%] generated/mne.equalize_channels
writing output... [ 46%] generated/mne.event.define_target_events
writing output... [ 46%] generated/mne.extract_label_time_course
writing output... [ 46%] generated/mne.filter.band_pass_filter
writing output... [ 47%] generated/mne.filter.construct_iir_filter
writing output... [ 47%] generated/mne.filter.high_pass_filter
writing output... [ 47%] generated/mne.filter.low_pass_filter
writing output... [ 47%] generated/mne.find_events
writing output... [ 48%] generated/mne.find_stim_steps
writing output... [ 48%] generated/mne.forward.restrict_forward_to_label
writing output... [ 48%] generated/mne.forward.restrict_forward_to_stc
writing output... [ 48%] generated/mne.get_chpi_positions
writing output... [ 49%] generated/mne.get_config
writing output... [ 49%] generated/mne.get_config_path
writing output... [ 49%] generated/mne.get_head_surf
writing output... [ 49%] generated/mne.get_meg_helmet_surf
writing output... [ 50%] generated/mne.get_volume_labels_from_aseg
writing output... [ 50%] generated/mne.grade_to_tris
writing output... [ 50%] generated/mne.grade_to_vertices
writing output... [ 50%] generated/mne.grand_average
writing output... [ 50%] generated/mne.grow_labels
writing output... [ 51%] generated/mne.gui.coregistration
(line   36) ok        http://www.slideshare.net/mne-python/mnepython-coregistration
(line   36) ok        http://www.slideshare.net/mne-python/mnepython-scale-mri
writing output... [ 51%] generated/mne.gui.fiducials
writing output... [ 51%] generated/mne.inverse_sparse.gamma_map
writing output... [ 51%] generated/mne.inverse_sparse.mixed_norm
(line    7) redirect  http://dx.doi.org/10.1088/0031-9155/57/7/1937 - with See Other to http://iopscience.iop.org/0031-9155/57/7/1937/
writing output... [ 52%] generated/mne.inverse_sparse.tf_mixed_norm
(line   16) redirect  http://dx.doi.org/10.1007/978-3-642-22092-0_49 - with See Other to http://link.springer.com/chapter/10.1007%2F978-3-642-22092-0_49
writing output... [ 52%] generated/mne.io.Raw
writing output... [ 52%] generated/mne.io.RawArray
writing output... [ 52%] generated/mne.io.RawFIFF
writing output... [ 53%] generated/mne.io.kit.read_mrk
writing output... [ 53%] generated/mne.io.read_raw_brainvision
writing output... [ 53%] generated/mne.io.read_raw_bti
writing output... [ 53%] generated/mne.io.read_raw_edf
writing output... [ 54%] generated/mne.io.read_raw_egi
writing output... [ 54%] generated/mne.io.read_raw_kit
writing output... [ 54%] generated/mne.io.set_bipolar_reference
writing output... [ 54%] generated/mne.io.set_eeg_reference
writing output... [ 55%] generated/mne.io.show_fiff
writing output... [ 55%] generated/mne.label_sign_flip
writing output... [ 55%] generated/mne.make_field_map
writing output... [ 55%] generated/mne.make_fixed_length_events
writing output... [ 56%] generated/mne.make_forward_solution
writing output... [ 56%] generated/mne.merge_events
writing output... [ 56%] generated/mne.minimum_norm.InverseOperator
writing output... [ 56%] generated/mne.minimum_norm.apply_inverse
writing output... [ 57%] generated/mne.minimum_norm.apply_inverse_epochs
writing output... [ 57%] generated/mne.minimum_norm.apply_inverse_raw
writing output... [ 57%] generated/mne.minimum_norm.compute_rank_inverse
writing output... [ 57%] generated/mne.minimum_norm.cross_talk_function
writing output... [ 58%] generated/mne.minimum_norm.make_inverse_operator
writing output... [ 58%] generated/mne.minimum_norm.point_spread_function
writing output... [ 58%] generated/mne.minimum_norm.read_inverse_operator
writing output... [ 58%] generated/mne.minimum_norm.source_band_induced_power
writing output... [ 59%] generated/mne.minimum_norm.source_induced_power
writing output... [ 59%] generated/mne.minimum_norm.write_inverse_operator
writing output... [ 59%] generated/mne.morph_data
writing output... [ 59%] generated/mne.morph_data_precomputed
writing output... [ 60%] generated/mne.parse_config
writing output... [ 60%] generated/mne.pick_channels
writing output... [ 60%] generated/mne.pick_channels_cov
writing output... [ 60%] generated/mne.pick_channels_forward
writing output... [ 61%] generated/mne.pick_channels_regexp
writing output... [ 61%] generated/mne.pick_events
writing output... [ 61%] generated/mne.pick_types
writing output... [ 61%] generated/mne.pick_types_evoked
writing output... [ 62%] generated/mne.pick_types_forward
writing output... [ 62%] generated/mne.preprocessing.ICA
writing output... [ 62%] generated/mne.preprocessing.compute_proj_ecg
writing output... [ 62%] generated/mne.preprocessing.compute_proj_eog
writing output... [ 63%] generated/mne.preprocessing.create_ecg_epochs
writing output... [ 63%] generated/mne.preprocessing.create_eog_epochs
writing output... [ 63%] generated/mne.preprocessing.find_ecg_events
writing output... [ 63%] generated/mne.preprocessing.find_eog_events
writing output... [ 64%] generated/mne.preprocessing.ica_find_ecg_events
writing output... [ 64%] generated/mne.preprocessing.ica_find_eog_events
writing output... [ 64%] generated/mne.preprocessing.read_ica
writing output... [ 64%] generated/mne.preprocessing.run_ica
writing output... [ 65%] generated/mne.read_bem_solution
writing output... [ 65%] generated/mne.read_bem_surfaces
writing output... [ 65%] generated/mne.read_cov
writing output... [ 65%] generated/mne.read_dip
writing output... [ 66%] generated/mne.read_dipole
writing output... [ 66%] generated/mne.read_epochs
writing output... [ 66%] generated/mne.read_events
writing output... [ 66%] generated/mne.read_evokeds
writing output... [ 67%] generated/mne.read_forward_solution
writing output... [ 67%] generated/mne.read_label
writing output... [ 67%] generated/mne.read_labels_from_annot
writing output... [ 67%] generated/mne.read_morph_map
writing output... [ 68%] generated/mne.read_proj
writing output... [ 68%] generated/mne.read_reject_parameters
writing output... [ 68%] generated/mne.read_selection
writing output... [ 68%] generated/mne.read_source_estimate
writing output... [ 69%] generated/mne.read_source_spaces
writing output... [ 69%] generated/mne.read_surface
writing output... [ 69%] generated/mne.read_trans
writing output... [ 69%] generated/mne.realtime.FieldTripClient
writing output... [ 70%] generated/mne.realtime.MockRtClient
writing output... [ 70%] generated/mne.realtime.RtClient
writing output... [ 70%] generated/mne.realtime.RtEpochs
writing output... [ 70%] generated/mne.realtime.StimClient
writing output... [ 71%] generated/mne.realtime.StimServer
writing output... [ 71%] generated/mne.rename_channels
writing output... [ 71%] generated/mne.report.Report
writing output... [ 71%] generated/mne.save_stc_as_volume
writing output... [ 72%] generated/mne.scale_bem
writing output... [ 72%] generated/mne.scale_labels
writing output... [ 72%] generated/mne.scale_mri
writing output... [ 72%] generated/mne.scale_source_space
writing output... [ 73%] generated/mne.sensitivity_map
writing output... [ 73%] generated/mne.set_config
writing output... [ 73%] generated/mne.set_log_file
(line   15) redirect  http://docs.python.org/dev/howto/logging.html - permanently to https://docs.python.org/dev/howto/logging.html
writing output... [ 73%] generated/mne.set_log_level
writing output... [ 74%] generated/mne.setup_source_space
writing output... [ 74%] generated/mne.setup_volume_source_space
writing output... [ 74%] generated/mne.simulation.generate_evoked
writing output... [ 74%] generated/mne.simulation.generate_sparse_stc
writing output... [ 75%] generated/mne.simulation.select_source_in_label
writing output... [ 75%] generated/mne.spatial_dist_connectivity
writing output... [ 75%] generated/mne.spatial_src_connectivity
writing output... [ 75%] generated/mne.spatial_tris_connectivity
writing output... [ 76%] generated/mne.spatio_temporal_dist_connectivity
writing output... [ 76%] generated/mne.spatio_temporal_src_connectivity
writing output... [ 76%] generated/mne.spatio_temporal_tris_connectivity
writing output... [ 76%] generated/mne.split_label
writing output... [ 77%] generated/mne.stats.bonferroni_correction
writing output... [ 77%] generated/mne.stats.fdr_correction
writing output... [ 77%] generated/mne.stats.linear_regression
writing output... [ 77%] generated/mne.stats.permutation_cluster_1samp_test
writing output... [ 78%] generated/mne.stats.permutation_cluster_test
writing output... [ 78%] generated/mne.stats.permutation_t_test
(line   61) redirect  http://dx.doi.org/10.1002/hbm.1058 - with See Other to http://onlinelibrary.wiley.com/doi/10.1002/hbm.1058/abstract;jsessionid=346E7B429F6F863A79679FFD5DD7832C.f01t04
writing output... [ 78%] generated/mne.stats.spatio_temporal_cluster_1samp_test
writing output... [ 78%] generated/mne.stats.spatio_temporal_cluster_test
writing output... [ 79%] generated/mne.stats.ttest_1samp_no_p
writing output... [ 79%] generated/mne.stc_to_label
writing output... [ 79%] generated/mne.time_frequency.ar_raw
writing output... [ 79%] generated/mne.time_frequency.compute_epochs_psd
writing output... [ 80%] generated/mne.time_frequency.compute_raw_psd
writing output... [ 80%] generated/mne.time_frequency.cwt_morlet
writing output... [ 80%] generated/mne.time_frequency.iir_filter_raw
writing output... [ 80%] generated/mne.time_frequency.istft
writing output... [ 81%] generated/mne.time_frequency.morlet
writing output... [ 81%] generated/mne.time_frequency.read_tfrs
writing output... [ 81%] generated/mne.time_frequency.single_trial_power
writing output... [ 81%] generated/mne.time_frequency.stft
writing output... [ 82%] generated/mne.time_frequency.stftfreq
writing output... [ 82%] generated/mne.time_frequency.tfr_morlet
writing output... [ 82%] generated/mne.time_frequency.tfr_multitaper
writing output... [ 82%] generated/mne.time_frequency.tfr_stockwell
writing output... [ 83%] generated/mne.time_frequency.write_tfrs
writing output... [ 83%] generated/mne.time_frequency.yule_walker
(line    9) ok        http://en.wikipedia.org/wiki/Autoregressive_moving_average_model
writing output... [ 83%] generated/mne.transform_coordinates
writing output... [ 83%] generated/mne.transform_surface_to
writing output... [ 84%] generated/mne.vertex_to_mni
writing output... [ 84%] generated/mne.viz.circular_layout
writing output... [ 84%] generated/mne.viz.compare_fiff
writing output... [ 84%] generated/mne.viz.mne_analyze_colormap
writing output... [ 85%] generated/mne.viz.plot_connectivity_circle
(line    5) broken    http://www.loria.fr/~rougier/coding/recipes.html - HTTP Error 404: Not Found
writing output... [ 85%] generated/mne.viz.plot_cov
writing output... [ 85%] generated/mne.viz.plot_drop_log
writing output... [ 85%] generated/mne.viz.plot_events
writing output... [ 86%] generated/mne.viz.plot_evoked
writing output... [ 86%] generated/mne.viz.plot_evoked_field
writing output... [ 86%] generated/mne.viz.plot_evoked_image
writing output... [ 86%] generated/mne.viz.plot_evoked_topomap
writing output... [ 87%] generated/mne.viz.plot_evoked_white
writing output... [ 87%] generated/mne.viz.plot_ica_components
writing output... [ 87%] generated/mne.viz.plot_ica_overlay
writing output... [ 87%] generated/mne.viz.plot_ica_scores
writing output... [ 88%] generated/mne.viz.plot_ica_sources
writing output... [ 88%] generated/mne.viz.plot_image_epochs
writing output... [ 88%] generated/mne.viz.plot_projs_topomap
writing output... [ 88%] generated/mne.viz.plot_raw
writing output... [ 89%] generated/mne.viz.plot_raw_psds
writing output... [ 89%] generated/mne.viz.plot_source_estimates
writing output... [ 89%] generated/mne.viz.plot_sparse_source_estimates
writing output... [ 89%] generated/mne.viz.plot_tfr_topomap
writing output... [ 90%] generated/mne.viz.plot_topo
writing output... [ 90%] generated/mne.viz.plot_topo_image_epochs
writing output... [ 90%] generated/mne.viz.plot_topomap
writing output... [ 90%] generated/mne.write_bem_surface
writing output... [ 91%] generated/mne.write_cov
writing output... [ 91%] generated/mne.write_events
writing output... [ 91%] generated/mne.write_evokeds
writing output... [ 91%] generated/mne.write_forward_solution
writing output... [ 92%] generated/mne.write_label
writing output... [ 92%] generated/mne.write_labels_to_annot
writing output... [ 92%] generated/mne.write_proj
writing output... [ 92%] generated/mne.write_source_spaces
writing output... [ 93%] generated/mne.write_surface
writing output... [ 93%] generated/mne.write_trans
writing output... [ 93%] getting_started
(line   14) redirect  http://scipy-lectures.github.com - permanently to http://scipy-lectures.github.io/
(line   22) ok        https://store.continuum.io/cshop/anaconda/
writing output... [ 93%] index
(line   42) ok        http://www.nmr.mgh.harvard.edu/martinos/userInfo/data/MNE_register/index.php
(line   46) ok        http://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis
writing output... [ 94%] manual
writing output... [ 94%] manual/AppA
(line  311) redirect  http://brainsuite.usc.edu/ - with Found to http://neuroimage.usc.edu/neuro/BrainSuite
writing output... [ 94%] manual/AppB
writing output... [ 94%] manual/AppEULA
writing output... [ 95%] manual/AppInstall
(line   85) ok        http://netpbm.sourceforge.net/
(line   91) ok        http://www.macports.org/install.php
(line   85) ok        http://www.macports.org/
(line   97) redirect  http://xquartz.macosforge.org/ - with Found to http://xquartz.macosforge.org/landing/
writing output... [ 95%] manual/AppReleaseNotes
writing output... [ 95%] manual/analyze
(line 2457) ok        http://mathworld.wolfram.com/Quaternion.html
(line 2609) ok        https://surfer.nmr.mgh.harvard.edu/fswiki/TkMeditGuide/TkMeditReference/TkMeditScripting
writing output... [ 95%] manual/browse
writing output... [ 96%] manual/convert
(line  594) ok        http://www.edfplus.info/specs/edf.html
(line  598) ok        http://www.edfplus.info/specs/edfplus.html
(line  602) ok        http://www.biosemi.com/faq/file_format.htm
(line  778) ok        http://www.sourcesignal.com/formats_probe.html
(line  919) ok        http://www.sourcesignal.com/formats_probe.html
(line  675) ok        http://www.sourcesignal.com/formats_probe.html
(line  608) ok        http://www.sourcesignal.com/formats_probe.html
(line 1339) broken    http://people.scs.fsu.edu/~burkardt/data/smf.txt - HTTP Error 404: Not Found
writing output... [ 96%] manual/cookbook
(line   47) ok        https://surfer.nmr.mgh.harvard.edu/fswiki/RecommendedReconstruction
(line   47) ok        https://surfer.nmr.mgh.harvard.edu/fswiki/
writing output... [ 96%] manual/forward
(line   98) ok        http://imaging.mrc-cbu.cam.ac.uk/imaging/MniTalairach
(line  105) ok        http://imaging.mrc-cbu.cam.ac.uk/imaging/MniTalairach
(line  173) ok        https://surfer.nmr.mgh.harvard.edu/fswiki/CoordinateSystems
writing output... [ 96%] manual/intro
writing output... [ 97%] manual/list
writing output... [ 97%] manual/matlab
writing output... [ 97%] manual/mne
writing output... [ 97%] manual/morph
writing output... [ 98%] manual/reading
writing output... [ 98%] manual/sampledata
writing output... [ 98%] manual/utilities
writing output... [ 98%] mne-cpp
(line   11) ok        http://www2.tu-ilmenau.de/mne-cpp/space/doc/
(line   12) ok        https://github.com/mne-tools/mne-cpp/
(line   10) redirect  http://www.tu-ilmenau.de/mne-cpp - permanently to http://www.tu-ilmenau.de/bmti/forschung/datenanalyse-modellierung-und-inverse-verfahren/mne-cpp/
writing output... [ 99%] mne-python
writing output... [ 99%] mne_report_tutorial
writing output... [ 99%] python_reference
writing output... [ 99%] python_tutorial
(line   66) ok        http://ipython.scipy.org/
writing output... [100%] whats_new
(line   12) ok        http://ltl.tkk.fi/wiki/Mainak_Jas
(line   20) ok        https://github.com/leggitta
(line   18) ok        https://github.com/leggitta
(line   16) ok        https://github.com/leggitta
(line   14) ok        https://github.com/leggitta
(line   30) ok        https://github.com/maedoc
(line   24) ok        https://github.com/dengemann
(line   22) redirect  http://github.com/wmvanvliet - permanently to https://github.com/wmvanvliet
(line   26) ok        https://github.com/dengemann
(line   28) ok        https://github.com/dengemann
(line   32) ok        https://github.com/jona-sassenhagen
(line   32) ok        https://github.com/dengemann
(line   32) redirect  http://github.com/wmvanvliet - permanently to https://github.com/wmvanvliet
(line   36) ok        http://www.haribharadwaj.com
(line   32) ok        http://alexandre.gramfort.net
(line   32) ok        https://files.nyu.edu/tlb331/public/
(line   42) ok        https://files.nyu.edu/tlb331/public/
(line   44) ok        https://files.nyu.edu/tlb331/public/
(line   60) redirect  http://github.com/wmvanvliet - permanently to https://github.com/wmvanvliet
(line   38) ok        http://alexandre.gramfort.net
(line   50) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line   58) ok        https://github.com/MadsJensen
(line   73) ok        http://www.tu-ilmenau.de/bmti/fachgebiete/biomedizinische-technik/dipl-ing-daniel-strohmeier/
(line   68) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line   62) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line   92) redirect  http://github.com/wmvanvliet - permanently to https://github.com/wmvanvliet
(line   94) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  100) redirect  http://github.com/wmvanvliet - permanently to https://github.com/wmvanvliet
(line   64) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  124) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line   52) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  136) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  142) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line   82) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  158) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  160) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line   84) ok        https://github.com/fraimondo
(line  164) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  166) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  168) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  118) ok        https://github.com/fraimondo
(line  176) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  178) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  180) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  184) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  144) ok        http://tallinzen.net/
(line  162) ok        https://github.com/aestrivex
(line  200) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  172) ok        https://github.com/dgwakeman
(line  136) ok        http://www.ucl.ac.uk/ion/departments/sobell/Research/NWard
(line  186) ok        https://github.com/kazemakase
(line  192) ok        https://github.com/KatiRG
(line  202) ok        https://github.com/kingjr
(line  204) ok        https://github.com/kazemakase
(line  222) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  212) ok        https://github.com/adykstra
(line  214) ok        https://github.com/adykstra
(line  218) ok        https://github.com/jdammers
(line  238) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  251) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  220) ok        https://github.com/adykstra
(line  255) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  255) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  336) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  226) ok        http://www.neuroscience.cam.ac.uk/directory/profile.php?olafhauk
(line  338) ok        http://romanmne.blogspot.co.uk
(line  338) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  344) broken    http://www-sop.inria.fr/athena/Site/RomainTrachel - HTTP Error 403: Forbidden
(line  348) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  350) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  366) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  370) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  374) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  374) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  376) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  382) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  384) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  386) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  388) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  390) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  392) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  396) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  400) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  402) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  404) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  408) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  408) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  470) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  472) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  478) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  480) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  482) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  484) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  486) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  488) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  490) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  492) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  230) ok        https://github.com/jdammers
(line  496) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  498) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  500) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  502) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  506) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  508) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  510) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  512) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  514) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  516) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  518) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  520) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  522) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  528) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  528) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  530) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  530) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  540) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  542) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  544) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  546) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  554) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  556) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  560) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  566) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  568) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  570) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  572) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  627) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  631) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  633) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  635) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  637) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  639) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  641) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  643) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  645) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  658) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  664) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  664) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  666) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  668) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  670) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  676) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  676) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  680) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  684) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  686) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  690) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  692) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  692) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  698) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  700) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  702) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  704) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  706) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  706) redirect  http://faculty.washington.edu/larsoner/ - with Found to http://staff.washington.edu/larsoner/
(line  708) broken    https://github.com/christianmbrodbeck - HTTP Error 404: Not Found
(line  708) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  712) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  714) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  759) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  767) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  769) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  781) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  783) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  810) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  812) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  816) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  822) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  824) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  828) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  853) broken    http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1600 - HTTP Error 403: Forbidden
(line  253) ok        https://github.com/dongqunxi
(line  336) ok        https://github.com/chdinh
(line  230) ok        http://www.researchgate.net/profile/Lukas_Breuer
(line  494) ok        http://simonster.com
```



Discussion:
+1 for fixing this, plus adding some cleaning of the `make linkcheck` to only display lines that are actually useful (maybe just containing "broken").

@TanayGahlot could be an easy fix for you

Cool, I will take it up 


Resolving patch:
diff --git a/examples/plot_channel_epochs_image.py b/examples/plot_channel_epochs_image.py
--- a/examples/plot_channel_epochs_image.py
+++ b/examples/plot_channel_epochs_image.py
@@ -15,7 +15,7 @@
 Graph-based variability estimation in single-trial event-related neural
 responses A. Gramfort, R. Keriven, M. Clerc, 2010,
 Biomedical Engineering, IEEE Trans. on, vol. 57 (5), 1051-1061
-http://hal.inria.fr/inria-00497023
+https://hal.inria.fr/inria-00497023
 """
 # Authors: Alexandre Gramfort <alexandre.gramfort@telecom-paristech.fr>
 #
diff --git a/mne/utils.py b/mne/utils.py
--- a/mne/utils.py
+++ b/mne/utils.py
@@ -836,7 +836,7 @@ def set_log_file(fname=None, output_format='%(message)s', overwrite=None):
         To suppress log outputs, use set_log_level('WARN').
     output_format : str
         Format of the output messages. See the following for examples:
-            http://docs.python.org/dev/howto/logging.html
+            https://docs.python.org/dev/howto/logging.html
         e.g., "%(asctime)s - %(levelname)s - %(message)s".
     overwrite : bool, or None
         Overwrite the log file (if it exists). Otherwise, statements
diff --git a/mne/viz/circle.py b/mne/viz/circle.py
--- a/mne/viz/circle.py
+++ b/mne/viz/circle.py
@@ -134,7 +134,7 @@ def plot_connectivity_circle(con, node_names, indices=None, n_lines=None,
     """Visualize connectivity as a circular graph.
 
     Note: This code is based on the circle graph example by Nicolas P. Rougier
-    http://www.loria.fr/~rougier/coding/recipes.html
+    http://www.labri.fr/perso/nrougier/coding/.
 
     Parameters
     ----------


Test patch: