internlm/SWE-Fixer-Train-110K huggingface dataset:
Repository: cobbler/cobbler

Issue:
Cobbler import doesnt work with relative paths
```
[root@centos-7-amd64 data]# cobbler import --name=sles-12.1-x86_64 --path=./iso
task started: 2016-01-22_140455_import
task started (id=Media import, time=Fri Jan 22 14:04:55 2016)
Exception occured: <class 'cobbler.cexceptions.CX'>
Exception value: 'Command failed'
Exception Info:
  File "/usr/lib/python2.7/site-packages/cobbler/remote.py", line 82, in run
    rc = self._run(self)
   File "/usr/lib/python2.7/site-packages/cobbler/remote.py", line 226, in runner
    self.logger
   File "/usr/lib/python2.7/site-packages/cobbler/api.py", line 876, in import_tree
    utils.run_this(rsync_cmd, (spacer, mirror_url, path), self.logger)
   File "/usr/lib/python2.7/site-packages/cobbler/utils.py", line 889, in run_this
    die(logger,"Command failed")
   File "/usr/lib/python2.7/site-packages/cobbler/utils.py", line 114, in die
    raise CX(msg)

!!! TASK FAILED !!!
```



Discussion:

Resolving patch:
diff --git a/cobbler/cli.py b/cobbler/cli.py
--- a/cobbler/cli.py
+++ b/cobbler/cli.py
@@ -591,6 +591,9 @@ def direct_command(self, action_name):
             self.parser.add_option("--autoinstall", dest="autoinstall_file", help="assign this autoinstall file")
             self.parser.add_option("--rsync-flags", dest="rsync_flags", help="pass additional flags to rsync")
             (options, args) = self.parser.parse_args()
+            if options.path:
+                # convert relative path to absolute path
+                options.path = os.path.abspath(options.path)
             task_id = self.start_task("import", options)
         elif action_name == "reposync":
             self.parser.add_option("--only", dest="only", help="update only this repository name")


Test patch:
Repository: cobbler/cobbler

Issue:
Reposync excludes not working
I believe 4cba821006adde5afb8d9ff10f90a54ec9a8a4fb was a mistake and needs reverted. Currently the reposync function will not work with excludes. However the excludes will make it to the config.repo file for clients. This was fixed based in #218 originally. 



Discussion:
This worked in the 2.6.x releases until 2.6.7.  Is there going to be a 2.6.x release to fix this?

Resolving patch:
diff --git a/cobbler/action_reposync.py b/cobbler/action_reposync.py
--- a/cobbler/action_reposync.py
+++ b/cobbler/action_reposync.py
@@ -563,6 +563,7 @@ def create_local_file(self, dest_path, repo, output=True):
         config_file.write("[%s]\n" % repo.name)
         config_file.write("name=%s\n" % repo.name)
         if 'exclude' in repo.yumopts.keys():
+            config_file.write("exclude=%s\n" % repo.yumopts['exclude'])
             self.logger.debug("excluding: %s" % repo.yumopts['exclude'])
         optenabled = False
         optgpgcheck = False


Test patch:
Repository: cobbler/cobbler

Issue:
Reposync excludes not working
I believe 4cba821006adde5afb8d9ff10f90a54ec9a8a4fb was a mistake and needs reverted. Currently the reposync function will not work with excludes. However the excludes will make it to the config.repo file for clients. This was fixed based in #218 originally. 



Discussion:
This worked in the 2.6.x releases until 2.6.7.  Is there going to be a 2.6.x release to fix this?

Resolving patch:
diff --git a/cobbler/action_reposync.py b/cobbler/action_reposync.py
--- a/cobbler/action_reposync.py
+++ b/cobbler/action_reposync.py
@@ -580,6 +580,7 @@ def create_local_file(self, dest_path, repo, output=True):
         config_file.write("[%s]\n" % repo.name)
         config_file.write("name=%s\n" % repo.name)
         if 'exclude' in repo.yumopts.keys():
+            config_file.write("exclude=%s\n" % repo.yumopts['exclude'])
             self.logger.debug("excluding: %s" % repo.yumopts['exclude'])
         optenabled = False
         optgpgcheck = False


Test patch:
Repository: cobbler/cobbler

Issue:
Replacing mod_python
Due to the fact that the current status of the `mod_python` apache2 module is "dropped" or at least "not actively maintained" I propose that cobbler moved onwards to a replacement of `mod_python`. On SUSE based distros there is currently no possibility to install `mod_python` without using non-official packages. Also my search on Ubuntu was not successfull.

A candidate which should be considered for replacing it should be `mod_wsgi` in my eyes.


Discussion:
So, near as I can tell, this was already done long ago, but setup.py was never changed to require mod_wsgi instead?

Resolving patch:
diff --git a/cobbler/utils.py b/cobbler/utils.py
--- a/cobbler/utils.py
+++ b/cobbler/utils.py
@@ -1907,7 +1907,7 @@ def get_valid_archs():
 def get_shared_secret():
     """
     The 'web.ss' file is regenerated each time cobblerd restarts and is
-    used to agree on shared secret interchange between mod_python and
+    used to agree on shared secret interchange between the web server and
     cobblerd, and also the CLI and cobblerd, when username/password
     access is not required.  For the CLI, this enables root users
     to avoid entering username/pass if on the cobbler server.
diff --git a/setup.py b/setup.py
--- a/setup.py
+++ b/setup.py
@@ -587,7 +587,7 @@ def parse_os_release():
         url="https://cobbler.github.io",
         license="GPLv2+",
         requires=[
-            "mod_python",
+            "mod_wsgi",
             "cobbler",
         ],
         packages=[


Test patch:
Repository: cobbler/cobbler

Issue:
Manpages build with setuptools integration
@rbberger pointed out in https://github.com/cobbler/cobbler/issues/2165#issuecomment-542787275 that Sphinx (which is generating our manpages) is able to do this also inside the setup.py.

Here is a document for this: https://www.sphinx-doc.org/en/master/usage/advanced/setuptools.html




Discussion:
python setup.py build_sphinx -b man

indeed creates manpages as needed. I guess this one can be closed. I point Richard to it. Once this shows up in a build file it is obvious.

Resolving patch:
diff --git a/setup.py b/setup.py
--- a/setup.py
+++ b/setup.py
@@ -487,7 +487,7 @@ def requires(filename):
 
     # Trailing slashes on these vars is to allow for easy
     # later configuration of relative paths if desired.
-    docpath = "share/man/man1"
+    docpath = "share/man"
     etcpath = "/etc/cobbler/"
     libpath = "/var/lib/cobbler/"
     logpath = "/var/log/"
@@ -678,6 +678,7 @@ def requires(filename):
             ("%szone_templates" % etcpath, []),
             ("%s" % etcpath, ["config/cobbler/logging_config.conf"]),
             # man pages
-            (docpath, glob("build/sphinx/man/*")),
+            ("%s/man1" % docpath, glob("build/sphinx/man/*.1")),
+            ("%s/man5" % docpath, glob("build/sphinx/man/*.5")),
         ],
     )


Test patch:
Repository: cobbler/cobbler

Issue:
/var/lib/cobbler/triggers/task/*/[pre,post] missing
### Describe the bug

@hbokh detected that the directories from the title are missing on a default fresh Cobbler 3 installation.

### To Reproduce

1. Install Cobbler via any method
2. Move to `/var/lib/cobbler/triggers`
3. Detect missing directories

### Expected behavior

The directories are present in the directory structure of cobbler.

### Version

V3.x.x

### Additional context

- https://github.com/cobbler/cobbler/blob/master/cobbler/remote.py#L81
- This can be solved by adding this in setup.py`



Discussion:

Resolving patch:
diff --git a/setup.py b/setup.py
--- a/setup.py
+++ b/setup.py
@@ -646,6 +646,20 @@ def run(self):
             ("%striggers/sync/pre" % libpath, []),
             ("%striggers/sync/post" % libpath, []),
             ("%striggers/change" % libpath, []),
+            ("%striggers/task/distro/pre" % libpath, []),
+            ("%striggers/task/distro/post" % libpath, []),
+            ("%striggers/task/profile/pre" % libpath, []),
+            ("%striggers/task/profile/post" % libpath, []),
+            ("%striggers/task/system/pre" % libpath, []),
+            ("%striggers/task/system/post" % libpath, []),
+            ("%striggers/task/repo/pre" % libpath, []),
+            ("%striggers/task/repo/post" % libpath, []),
+            ("%striggers/task/mgmtclass/pre" % libpath, []),
+            ("%striggers/task/mgmtclass/post" % libpath, []),
+            ("%striggers/task/package/pre" % libpath, []),
+            ("%striggers/task/package/post" % libpath, []),
+            ("%striggers/task/file/pre" % libpath, []),
+            ("%striggers/task/file/post" % libpath, []),
             # Build empty directories to hold the database
             ("%scollections" % libpath, []),
             ("%scollections/distros" % libpath, []),


Test patch:
Repository: cobbler/cobbler

Issue:
Add repo to profile, report error message.
cobbler 3.1.2

create a repo:
![QQ截图20200708173931](https://user-images.githubusercontent.com/11815186/86903516-03901d00-c142-11ea-91bc-560600057a62.png)

add repo to profile
![QQ截图20200708174012](https://user-images.githubusercontent.com/11815186/86903588-20c4eb80-c142-11ea-8d53-0227536f1a84.png)

View Automatic Installation Template
![QQ截图20200708174117](https://user-images.githubusercontent.com/11815186/86903670-3fc37d80-c142-11ea-97d9-0e740f2139b4.png)

/var/log/cobbler/cobbler.log
![QQ截图20200708174155](https://user-images.githubusercontent.com/11815186/86903741-5b2e8880-c142-11ea-972e-ccf1ec3d1dee.png)




Discussion:
remove repo from profile
![QQ截图20200708174346](https://user-images.githubusercontent.com/11815186/86903930-9761e900-c142-11ea-82a4-a044e821a072.png)

View Automatic Installation Template
![QQ截图20200708174421](https://user-images.githubusercontent.com/11815186/86904002-aba5e600-c142-11ea-897e-c7736f384750.png)


I had a short look at the code. Yes this bug can be reproduced if a repository has no yum options.

Resolving patch:
diff --git a/cobbler/items/mgmtclass.py b/cobbler/items/mgmtclass.py
--- a/cobbler/items/mgmtclass.py
+++ b/cobbler/items/mgmtclass.py
@@ -52,7 +52,7 @@ class Mgmtclass(item.Item):
 
     def __init__(self, *args, **kwargs):
         super(Mgmtclass, self).__init__(*args, **kwargs)
-        self.params = None
+        self.params = {}
 
     #
     # override some base class methods first (item.Item)
diff --git a/cobbler/items/repo.py b/cobbler/items/repo.py
--- a/cobbler/items/repo.py
+++ b/cobbler/items/repo.py
@@ -67,8 +67,8 @@ def __init__(self, *args, **kwargs):
         super(Repo, self).__init__(*args, **kwargs)
         self.breed = None
         self.arch = None
-        self.environment = None
-        self.yumopts = None
+        self.environment = {}
+        self.yumopts = {}
 
     #
     # override some base class methods first (item.Item)
diff --git a/cobbler/items/system.py b/cobbler/items/system.py
--- a/cobbler/items/system.py
+++ b/cobbler/items/system.py
@@ -126,7 +126,7 @@ class System(item.Item):
 
     def __init__(self, *args, **kwargs):
         super(System, self).__init__(*args, **kwargs)
-        self.interfaces = dict()
+        self.interfaces = {}
         self.kernel_options = {}
         self.kernel_options_post = {}
         self.autoinstall_meta = {}


Test patch:
Repository: cobbler/cobbler

Issue:
os_release does not recognise Oracle Linux
**Version:** 2.8.3
**File:** cobbler/utils.py 
**Function affected:** os_release(), tftpboot_location()

**Expected result:** On import of an iso the right directory should be selected by `tftpboot_location())` and in case of Oracle Linux return "/var/lib/tftpboot".
**Current result:** `tftpboot_location())` return "/tftpboot" due the fact that there iso match for OS known by coobler. 
**Reson:** `os_release()` is missing on `re.match("red ?hat|fedora|centos|scientific|virtuozzo linux", check_dist())` "oracle" as another os related to RHEL family. 


Discussion:
This is true for the 2.8 release and in part still for cobbler 3. Oracle Linux is still not detected, but the detection itself has changed a little bit. The more important change is that `tftpboot_location` is now coming from the settings. I'm curious how the `os-release` file of Oracle Linux is looking like. Could you attach one please? Thanks!
cat /etc/os-release
```
NAME="Oracle Linux Server"
VERSION="7.6"
ID="ol"
VARIANT="Server"
VARIANT_ID="server"
VERSION_ID="7.6"
PRETTY_NAME="Oracle Linux Server 7.6"
ANSI_COLOR="0;31"
CPE_NAME="cpe:/o:oracle:linux:7:6:server"
HOME_URL="https://linux.oracle.com/"
BUG_REPORT_URL="https://bugzilla.oracle.com/"

ORACLE_BUGZILLA_PRODUCT="Oracle Linux 7"
ORACLE_BUGZILLA_PRODUCT_VERSION=7.6
ORACLE_SUPPORT_PRODUCT="Oracle Linux"
ORACLE_SUPPORT_PRODUCT_VERSION=7.6
```
Thanks @kwizart! So this is vastly different from Rhel. No wonder this is not working.

Resolving patch:
diff --git a/cobbler/utils.py b/cobbler/utils.py
--- a/cobbler/utils.py
+++ b/cobbler/utils.py
@@ -961,7 +961,8 @@ def get_family() -> str:
              returned.
     """
     # TODO: Refactor that this is purely reliant on the distro module or obsolete it.
-    redhat_list = ("red hat", "redhat", "scientific linux", "fedora", "centos", "virtuozzo", "almalinux", "rocky linux")
+    redhat_list = ("red hat", "redhat", "scientific linux", "fedora", "centos", "virtuozzo", "almalinux",
+                   "rocky linux", "oracle linux server")
 
     distro_name = distro.name().lower()
     for item in redhat_list:
@@ -994,6 +995,8 @@ def os_release():
             make = "centos"
         elif "virtuozzo" in distro_name:
             make = "virtuozzo"
+        elif "oracle linux server" in distro_name:
+            make = "centos"
         else:
             make = "redhat"
         return make, float(distro_version)


Test patch:
Repository: cobbler/cobbler

Issue:
Cannot set property 'file' of image 
### Describe the bug

Set image's property 'file' is not working

### Steps to reproduce

1. `touch /tmp/test.iso`
2. Run below Python code on Cobbler installed machine

```
#!/usr/bin/python3
from xmlrpc.client import Server
rpc_server = Server("http://127.0.0.1/cobbler_api")
token = rpc_server.login('cobbler', 'cobbler')
image_handle = rpc_server.new_image(token)
rpc_server.modify_image(image_handle, "name", "testit", token)
rpc_server.modify_image(image_handle, "file", "/tmp/test.iso", token)
rpc_server.save_image(image_handle, token)

img = rpc_server.get_image("testit")
assert(img['file'] == "/tmp/test.iso")
```


### Expected behavior
End without AssertionError


### Cobbler version

<!--- Paste output from `cobbler version` -->
````
Cobbler 3.3.0
  source: d8f60bbf, Mon Sep 20 16:55:41 2021 +0200
  build time: Thu Dec 23 06:27:43 2021
````

### Operating system

<!--- On which operating system do you use Cobbler? -->
CentOS 8
### Cobbler log

<!--- Paste (partial) output from `/var/log/cobbler/cobbler.log` -->
````paste below
````

### Screenshots

<!--- If applicable, add screenshots to help explain your problem. -->

### Additional information

<!--- Add any other context about the problem here. -->



Discussion:

Resolving patch:
diff --git a/cobbler/items/image.py b/cobbler/items/image.py
--- a/cobbler/items/image.py
+++ b/cobbler/items/image.py
@@ -206,6 +206,8 @@ def file(self, filename: str):
         if len(auth) > 0 and len(hostname) == 0:
             raise SyntaxError("a hostname must be specified with authentication details")
 
+        self._file = uri
+
     @property
     def os_version(self) -> str:
         r"""


Test patch:
diff --git a/tests/items/image_test.py b/tests/items/image_test.py
--- a/tests/items/image_test.py
+++ b/tests/items/image_test.py
@@ -56,10 +56,10 @@ def test_file():
     image = Image(test_api)
 
     # Act
-    image.file = ""
+    image.file = "/tmp/test"
 
     # Assert
-    assert image.file == ""
+    assert image.file == "/tmp/test"
 
 
 def test_os_version():
Repository: cobbler/cobbler

Issue:
Bug: exception on server: '_DnsmasqManager' object has no attribute 'write_dns_files'
All things are done strictly followed RTD. Running on Debian 11.

Context linked with Issue #2968 , It is really exhausted to experience such a large number of bugs in few days...

```
root@debian11:~# cobbler system remove --name=debnetinstTest
<ALREADY REMOVED BEFORE I PROCEED>
root@debian11:~# cobbler system add --name=debnetinstTest --profile=debian11-d-i-x86_64
exception on server: '_DnsmasqManager' object has no attribute 'write_dns_files'
root@debian11:~# cobbler version
Cobbler 3.3.2
  source: 9044aa99, Fri Mar 11 09:59:35 2022 +0100
  build time: Mon Mar 21 12:51:50 2022
```

Seems another bug... even I upgraded the version and then `make devinstall` then reboot


Discussion:

Resolving patch:
diff --git a/cobbler/actions/sync.py b/cobbler/actions/sync.py
--- a/cobbler/actions/sync.py
+++ b/cobbler/actions/sync.py
@@ -104,7 +104,7 @@ def run_sync_systems(self, systems: List[str]):
         if self.settings.manage_dns:
             self.logger.info("rendering DNS files")
             self.dns.regen_hosts()
-            self.dns.write_dns_files()
+            self.dns.write_configs()
 
         self.logger.info("cleaning link caches")
         self.clean_link_cache()


Test patch:
Repository: cobbler/cobbler

Issue:
netcfg/get_nameservers in the boot prompt is split and joined with commas after each character 
### Describe the bug

netcfg/get_nameservers is not interpolated properly

### Steps to reproduce

1. for instance use `--kopts` on Ubuntu/Debian to set the DNS as follows: `netcfg/get_nameservers=1.9.168.0.1`
2. the boot prompt will contain: `netcfg/get_nameservers=1,.,9,.,1,6,8,.,0,.,1`
3. even if I try to use and array, it always interpolated as a string and I get the following: `netcfg/get_nameservers=[,",1,.,9,.,1,6,8,.,0,.,1,",]`

### Expected behavior

the boot prompt should contain `netcfg/get_nameservers=1.9.168.0.1`

### Cobbler version

`2.8.5`

### Operating system

CentOS 7

### Cobbler log

N/A


### Screenshots

N/A

### Additional information

I have PR ready 


Discussion:

Resolving patch:
diff --git a/cobbler/action_buildiso.py b/cobbler/action_buildiso.py
--- a/cobbler/action_buildiso.py
+++ b/cobbler/action_buildiso.py
@@ -397,7 +397,10 @@ def generate_netboot_iso(self,imagesdir,isolinuxdir,profiles=None,systems=None,e
                    else:
                       append_line += " dns=%s" % my_dns
                 if dist.breed in ["ubuntu","debian"]:
-                   append_line += " netcfg/get_nameservers=%s" % ",".join(my_dns)
+                   if type(my_dns) == list:
+                      append_line += " netcfg/get_nameservers=%s" % ",".join(my_dns)
+                   else:
+                      append_line += " netcfg/get_nameservers=%s" % my_dns
 
              # add remaining kernel_options to append_line
              append_line += self.add_remaining_kopts(data["kernel_options"])


Test patch:
Repository: cobbler/cobbler

Issue:
having manage_dhcp or manage_dns false in settings.yaml is not an error
Some remote side may trigger the codepath `cobbler/api.py:sync()`.
This leads to errors from `sync_dns()` and `sync_dhcp()` if any of those features is disabled in this cobbler instance.

I think it would be perfectly fine to just return silently if `self.settings().manage_dhcp` and `self.settings().manage_dns` return `False`.


Discussion:

Resolving patch:
diff --git a/cobbler/api.py b/cobbler/api.py
--- a/cobbler/api.py
+++ b/cobbler/api.py
@@ -1681,7 +1681,7 @@ def sync_dns(self):
         Only build out the DNS configuration.
         """
         if not self.settings().manage_dns:
-            self.logger.error("manage_dns not set")
+            self.logger.info('"manage_dns" not set. Skipping DNS sync.')
             return
         self.logger.info("sync_dns")
         dns_module = self.get_module_from_file("dns", "module", "managers.bind")
@@ -1695,7 +1695,7 @@ def sync_dhcp(self):
         Only build out the DHCP configuration.
         """
         if not self.settings().manage_dhcp:
-            self.logger.error("manage_dhcp not set")
+            self.logger.info('"manage_dhcp" not set. Skipping DHCP sync.')
             return
         self.logger.info("sync_dhcp")
         dhcp_module = self.get_module_from_file("dhcp", "module", "managers.isc")


Test patch:
Repository: cobbler/cobbler

Issue:
[Backport] [mkloaders] Add the missing 'syslinux/libutil.c32'
### Original feature issue

<!--- (if present): Describe the feature --->
- PR: #3024

### Target release

- [x] release33
- [ ] release32
- [ ] release30

### Reason

In Uyuni/SUSE Manager we need a stable version of Cobbler which is suitable for long term support. This issue is part of the effort to stabilize the Release V3.3.x series for this usecase.



Discussion:

Resolving patch:
diff --git a/cobbler/actions/mkloaders.py b/cobbler/actions/mkloaders.py
--- a/cobbler/actions/mkloaders.py
+++ b/cobbler/actions/mkloaders.py
@@ -108,13 +108,23 @@ def make_syslinux(self):
         if not utils.command_existing("syslinux"):
             self.logger.info("syslinux command not available. Bailing out of syslinux setup!")
             return
+        syslinux_version = get_syslinux_version()
         # Make modules
         symlink(
             self.syslinux_folder.joinpath("menu.c32"),
             self.bootloaders_dir.joinpath("menu.c32"),
             skip_existing=True
         )
-        if get_syslinux_version() < 5:
+        # According to https://wiki.syslinux.org/wiki/index.php?title=Library_modules,
+        # 'menu.c32' depends on 'libutil.c32'.
+        libutil_c32_path = self.syslinux_folder.joinpath("libutil.c32")
+        if syslinux_version > 4 and libutil_c32_path.exists():
+            symlink(
+                libutil_c32_path,
+                self.bootloaders_dir.joinpath("libutil.c32"),
+                skip_existing=True,
+            )
+        if syslinux_version < 5:
             # This file is only required for Syslinux 5 and newer.
             # Source: https://wiki.syslinux.org/wiki/index.php?title=Library_modules
             self.logger.info('syslinux version 4 detected! Skip making symlink of "ldlinux.c32" file!')


Test patch: