internlm/SWE-Fixer-Train-110K huggingface dataset:
Repository: coala/coala

Issue:
ConfigurationGathering.py: Add :return: for warn_config_absent
https://github.com/coala/coala/blob/master/coalib/settings/ConfigurationGathering.py#L138
difficulty/newcomer

<!-- Hello! If you're filing a bug, please include every step so as to help us reproduce it on our machines. If you're unsure about how to file an issue, use the issue template. If you need any help regarding usage of coala, check out the documentation or hit us up on chat. You can ignore or delete this text, it is commented and won't appear when the issue is submitted or previewed.

Chat: https://coala.io/chat
Issue Template: https://github.com/coala/coala/blob/master/CONTRIBUTING.rst#filing-issues
Documentation: https://docs.coala.io
-->



Discussion:

Resolving patch:
diff --git a/coalib/settings/ConfigurationGathering.py b/coalib/settings/ConfigurationGathering.py
--- a/coalib/settings/ConfigurationGathering.py
+++ b/coalib/settings/ConfigurationGathering.py
@@ -149,6 +149,8 @@ def warn_config_absent(sections, argument, log_printer):
     :param sections:    A dictionary of sections.
     :param argument:    The argument to check for, e.g. "files".
     :param log_printer: A log printer to emit the warning to.
+    :return:            Returns a boolean True if the given argument
+                        is present in the sections, else returns False.
     """
     if all(argument not in section for section in sections.values()):
         log_printer.warn('coala will not run any analysis. Did you forget '


Test patch:
Repository: coala/coala

Issue:
linter: GlobalBear example wrong in docstring
https://github.com/coala/coala/blob/master/coalib/bearlib/abstractions/Linter.py#L780

The `filename` param doesn't exist in this scope.


Discussion:
However, there appears to me a misconception in the global-bear feature: I would expect that a `file_dict` field is passed, where I have access to all files. I currently don't know how to access them.

So imo something like this should be possible and used as documentation:
```
def create_arguments(file_dict, config_file)
    return "--lint", file_dict.keys()
```

@NiklasMM why there's no `file_dict` parameter? :)
Removing `difficulty/newcomer` label until this is resolved.
There was a misunderstanding from my side: `file_dict` is accessed via self.
So the example should be this in the end:
```python
def create_arguments(config_file):
    return "--lint", self.file_dict.keys()
```

Resolving patch:
diff --git a/coalib/bearlib/abstractions/Linter.py b/coalib/bearlib/abstractions/Linter.py
--- a/coalib/bearlib/abstractions/Linter.py
+++ b/coalib/bearlib/abstractions/Linter.py
@@ -775,9 +775,8 @@ def linter(executable: str,
     ...         output_format='regex',
     ...         output_regex='...')
     ... class YLintBear:
-    ...     @staticmethod
-    ...     def create_arguments(config_file):
-    ...         return '--lint', filename
+    ...     def create_arguments(self, config_file):
+    ...         return '--lint', self.file_dict.keys()
 
     Requiring settings is possible like in ``Bear.run()`` with supplying
     additional keyword arguments (and if needed with defaults).


Test patch:
Repository: coala/coala

Issue:
Add docstring for coala_modes.py mode_normal
This function should have a proper docstring, and indicate that `log_printer` is unused & deprecated.


Discussion:
I am new to coala .Can I work on this issue?
Please read our newcomer guide, and I would recommend you pick a `difficulty/newcomer` issue first ;) @Subhash-Saurabh 
Hi. Can I work on this issue? There aren't many newcomer issues available and I have some experience with open source.
Please drop by in our gitter channel and mention me once you accepted invitation :+1:

Resolving patch:
diff --git a/coalib/coala_modes.py b/coalib/coala_modes.py
--- a/coalib/coala_modes.py
+++ b/coalib/coala_modes.py
@@ -1,4 +1,13 @@
 def mode_normal(console_printer, log_printer, args, debug=False):
+    """
+    This is the default coala mode. User interaction is allowed in this mode.
+
+    :param console_printer: Object to print messages on the console.
+    :param log_printer:     Deprecated.
+    :param args:            Alternative pre-parsed CLI arguments.
+    :param debug:           Run in debug mode, bypassing multiprocessing,
+                            and not catching any exceptions.
+    """
     import functools
 
     from coalib.coala_main import run_coala


Test patch:
Repository: coala/coala

Issue:
Compatibility.py: Add comment explaining JSONDecodeError is missing in Python 3.4
difficulty/newcomer

Opened via [gitter](https://gitter.im/coala/coala/?at=59098da68fcce56b205cd7e0) by @jayvdb


Discussion:
Hi 
I'd like to work on this issue.
Great!  Please follow our http://coala.io/newcomer process; jump onto http://coala.io/chat and request to join the org, so that we can assign this issue to you.
Ok, the next step is creating a nice commit http://coala.io/commit
Hello. I would like to work on this issue.
Unassigning due to inactivity.

Resolving patch:
diff --git a/coalib/misc/Compatibility.py b/coalib/misc/Compatibility.py
--- a/coalib/misc/Compatibility.py
+++ b/coalib/misc/Compatibility.py
@@ -1,5 +1,6 @@
 import json
 try:
+    # JSONDecodeError class is available since Python 3.5.x.
     JSONDecodeError = json.decoder.JSONDecodeError
 except AttributeError:  # pragma Python 3.5,3.6: no cover
     JSONDecodeError = ValueError


Test patch:
Repository: coala/coala

Issue:
Create Indentation aspects under Formatting.Spacing
Create an aspects named `Indentation` in files `Formatting.py`. The new aspects should have fullname of `root.Formatting.Spacing.Indentation`. It should have atleast the following taste:

- `indent_type` - what type of indentation used, could be `tab` or `space`
- `indent_size` - number of spaces per indentation level


Discussion:
hi, please assign the task to me :)

Resolving patch:
diff --git a/coalib/bearlib/aspects/Formatting.py b/coalib/bearlib/aspects/Formatting.py
--- a/coalib/bearlib/aspects/Formatting.py
+++ b/coalib/bearlib/aspects/Formatting.py
@@ -133,6 +133,40 @@ def func(   ):
         """
 
 
+@Spacing.subaspect
+class Indentation:
+    """
+    Spaces/tabs used before blocks of code to convey a program's structure.
+    """
+    class docs:
+        example = """
+        # If this code was written on an editor that defined a tab as 2
+        # spaces, mixing tabs and spaces would look like this on a different
+        # editor defining tabs as four spaces.
+
+        def spaces():
+          pass
+
+        def tabs():
+            pass
+        """
+        example_language = 'Python'
+        importance_reason = """
+        Mixing tabs and spaces can cause issues when collaborating on
+        code, as well as during testing and compilation.
+        """
+        fix_suggestions = """
+        Using either tabs or spaces consistently.
+        If using spaces, by using a suitable number of spaces, preferably four.
+        """
+    indent_type = Taste[int](
+        'Represents the type of indent used.',
+        ('tab', 'space'), default='tab')
+    indent_size = Taste[int](
+        'Represents the number of spaces per indentation level.',
+        (2, 3, 4, 5, 6), default=4)
+
+
 @Spacing.subaspect
 class TrailingSpace:
     """


Test patch:
Repository: coala/coala

Issue:
ConfigurationGathering.py: Fix docstring of function warn_config_absent()
return values of True and False are interchanged

difficulty/newcomer


Discussion:
If no one has been assigned this issue can I please work on it @ishanSrt 
I've requested a PR here. https://github.com/coala/coala/pull/5032

Sorry @shikhar-scs if you did not get assigned to this on time. Sometimes you gotta wait. Next time just ask a maintainer if you see him active on gitter.
@ppatel221 you should wait for assignment to an issue, your PR may be rejected by the maintainers
@ishanSrt 

> Next time just ask a maintainer if you see him active on gitter.

Yeah sure I'll do that the next time
 As of now, should I wait or work on this?
@ppatel221 Please get assigned to any issue before starting working on that. :smile:

@shikhar-scs Say "Hello World" on gitter channel and ask any maintainer to assign you to this issue after accepting the invite sent. Also, don't submit a PR (that might waste your precious time) before you are assigned to the issue. :+1:
Meanwhile, go through https://coala.io/newcomer :smiley:
I am starting work here, will hardly take any time. I'll file a PR once I am assigned
@ppatel221 is already working on this one.
@jayvdb Then assign "somebody" :stuck_out_tongue:
(We had a discussion on channel for not reviewing unless someone is assigned to the issue :wink:)
Hello Everyone, I would like to work on this issue. How do I proceed from here on?
@Jai-Z 2 people are already battling for this. better pick a different issue 😅
No problem. Thanks for replying though. 

  
@jayvdb Can I please resume my work ?
Please accept the invite via mail @shikhar-scs and then I'm going to assign you. You were first for this issue.
Accepted :smile: 
Could you please assign me this ? @Makman2 

Resolving patch:
diff --git a/coalib/settings/ConfigurationGathering.py b/coalib/settings/ConfigurationGathering.py
--- a/coalib/settings/ConfigurationGathering.py
+++ b/coalib/settings/ConfigurationGathering.py
@@ -194,8 +194,8 @@ def warn_config_absent(sections, argument, log_printer=None):
     :param argument:    An argument OR a list of arguments that at least 1
                         should present.
     :param log_printer: A log printer to emit the warning to.
-    :return:            Returns a boolean True if the given argument
-                        is present in the sections, else returns False.
+    :return:            Returns a boolean False if the given argument
+                        is present in the sections, else returns True.
     """
     if isinstance(argument, str):
         argument = [argument]


Test patch:
Repository: coala/coala

Issue:
Add more description to `preferred_quotation` taste
<!-- Hello! If you're filing a bug, please include every step so as to help us reproduce it on our machines. If you're unsure about how to file an issue, use the issue template. If you need any help regarding usage of coala, check out the documentation or hit us up on chat. You can ignore or delete this text, it is commented and won't appear when the issue is submitted or previewed.

Chat: https://coala.io/chat
Issue Template: https://github.com/coala/coala/blob/master/CONTRIBUTING.rst#filing-issues
Documentation: https://docs.coala.io
-->
`preferred_quotation` taste needs more description for making it in accordance with the new design of `Quotation` aspect, being discussed here https://github.com/coala/cEPs/pull/148


Discussion:

Resolving patch:
diff --git a/coalib/bearlib/aspects/Formatting.py b/coalib/bearlib/aspects/Formatting.py
--- a/coalib/bearlib/aspects/Formatting.py
+++ b/coalib/bearlib/aspects/Formatting.py
@@ -381,6 +381,7 @@ class docs:
 
         string = 'coala is always written with lowercase c.'
         string = "coala is always written with lowercase c."
+        string = "'coala' is always written with lowercase 'c'."
         """
         example_language = 'Python'
         importance_reason = """
@@ -391,5 +392,7 @@ class docs:
         Choosing a preferred quotation and using it everywhere (if possible).
         """
     preferred_quotation = Taste[str](
-        'Represents the preferred quotation',
+        'Represents the preferred quotation marks.'
+        'It ensures that every string contains the selected style of quotes, '
+        'except where there is a delimiter collision.',
         ('\'', '"'), default='\'')


Test patch:
Repository: coala/coala

Issue:
Imported classes should be arranged lexicographically
Classes being imported in `coala/coalib/bearlib/languages/__init__.py` file should be arranged alphabetically.

A good newcomer issue. 


Discussion:
Hi @Mah1ndra , are you still working on it ?. If not then can i take up the issue?
I want to work on this issue if no one is working on it
Hi @jayvdb . Since the contributor is not responding, i'll submit a pr for this(no activity from 15 days). Is it okay if i do that?
Thanks
Is this issue open?

@ishucr7 @aditya81070  @shivank1234 The issue has already been solved by the assignee. Please find yourselves other issues.
IMHO It would be really helpful if you have a look at the `Open Pr` present and have a look if the assignee has solved the problem before asking to claim the issue.It would really help you save, your time and you can better focus on other available issues :)
@jayvdb This issues can also be closed. 
No it can not be closed @pandyamarut .

It had a PR which was still open, but has been abandoned, so I have closed it and unassigned this issue, so another newcomer can attempt it.
can i work on this issue?

Hi @jayvdb 
Just checking if I've understood the problem well or not.

I just have to rearrange the imported modules in alphabetical order in 
`coala/coalib/bearlib/languages/__init__.py` file only right?

Or every file?
Yup, just that one file.

Resolving patch:
diff --git a/coalib/bearlib/languages/__init__.py b/coalib/bearlib/languages/__init__.py
--- a/coalib/bearlib/languages/__init__.py
+++ b/coalib/bearlib/languages/__init__.py
@@ -7,6 +7,7 @@
 from .Language import Languages
 
 from .definitions.Unknown import Unknown
+
 from .definitions.antlr import antlr
 from .definitions.Bash import Bash
 from .definitions.C import C
@@ -20,12 +21,13 @@
 from .definitions.html import HTML
 from .definitions.Java import Java
 from .definitions.JavaScript import JavaScript
+from .definitions.Jinja2 import Jinja2
 from .definitions.JSON import JSON
 from .definitions.JSP import JSP
 from .definitions.KornShell import KornShell
 from .definitions.m4 import m4
-from .definitions.Matlab import Matlab
 from .definitions.Markdown import Markdown
+from .definitions.Matlab import Matlab
 from .definitions.ObjectiveC import ObjectiveC
 from .definitions.PHP import PHP
 from .definitions.PLSQL import PLSQL
@@ -33,14 +35,14 @@
 from .definitions.Python import Python
 from .definitions.Ruby import Ruby
 from .definitions.Scala import Scala
+from .definitions.Shell import Shell
 from .definitions.Swift import Swift
 from .definitions.Tcl import Tcl
 from .definitions.TinyBasic import TinyBasic
-from .definitions.Vala import Vala
 from .definitions.TypeScript import TypeScript
-from .definitions.Shell import Shell
-from .definitions.Jinja2 import Jinja2
+from .definitions.Vala import Vala
 from .definitions.VisualBasic import VisualBasic
 from .definitions.XML import XML
-from.definitions.ZShell import ZShell
+from .definitions.ZShell import ZShell
+
 # Stop ignoring PyUnusedCodeBear


Test patch:
Repository: coala/coala

Issue:
Add language definition file for D



Discussion:
@jayvdb Can I please take this up?
@jayvdb kindly assign me the issue. 

Resolving patch:
diff --git a/coalib/bearlib/languages/__init__.py b/coalib/bearlib/languages/__init__.py
--- a/coalib/bearlib/languages/__init__.py
+++ b/coalib/bearlib/languages/__init__.py
@@ -13,6 +13,7 @@
 from .definitions.CPP import CPP
 from .definitions.CSharp import CSharp
 from .definitions.CSS import CSS
+from .definitions.D import D
 from .definitions.Fortran import Fortran
 from .definitions.Golang import Golang
 from .definitions.GraphQL import GraphQL
diff --git a/coalib/bearlib/languages/definitions/D.py b/coalib/bearlib/languages/definitions/D.py
new file mode 100644
--- /dev/null
+++ b/coalib/bearlib/languages/definitions/D.py
@@ -0,0 +1,32 @@
+from coalib.bearlib.languages.Language import Language
+
+
+@Language
+class D:
+    extensions = '.d',
+    comment_delimiters = '//',
+    string_delimiters = {'"': '"'}
+    multiline_comment_delimiters = {'/*': '*/'}
+    indent_types = {'{': '}'}
+    encapsulators = {'(': ')', '[': ']'}
+    keywords = [
+        'abstract', 'alias', 'align', 'asm', 'assert', 'auto', 'body', 'bool',
+        'break', 'byte', 'case', 'cast', 'catch', 'cdouble', 'cent', 'cfloat',
+        'char', 'class', 'const', 'continue', 'creal', 'dchar', 'debug',
+        'default', 'delegate', 'delete', 'deprecated', 'do', 'double', 'else',
+        'enum', 'export', 'extern', 'false', 'final', 'finally', 'float',
+        'for', 'foreach', 'foreach_reverse', 'function', 'goto', 'idouble',
+        'if', 'ifloat', 'immutable', 'import', 'in', 'inout', 'int',
+        'interface', 'invariant', 'ireal', 'is', 'lazy', 'long', 'macro',
+        'mixin', 'module', 'new', 'nothrow', 'null', 'out', 'override',
+        'package', 'pragma', 'private', 'protected', 'public', 'pure', 'real',
+        'ref', 'return', 'scope', 'shared', 'short', 'static', 'struct',
+        'super', 'switch', 'synchronized', 'template', 'this', 'throw', 'true',
+        'try', 'typedef', 'typeid', 'typeof', 'ubyte', 'ucent', 'uint',
+        'ulong', 'union', 'unittest', 'ushort', 'version', 'void', 'wchar',
+        'while', 'with', '__FILE__', '__FILE_FULL_PATH__', '__MODULE__',
+        '__LINE__', '__FUNCTION__', '__PRETTY_FUNCTION__', '__gshared',
+        '__traits', '__vector', '__parameters',
+    ]
+    special_chars = list(r'>+~/|}.^),{#=&!?@<$](%*[-')
+    string_delimiter_escape = {'"': '\\"'}


Test patch:
diff --git a/tests/TestUtilities.py b/tests/TestUtilities.py
--- a/tests/TestUtilities.py
+++ b/tests/TestUtilities.py
@@ -39,6 +39,7 @@
     'C#',
     'CPP',
     'CSS',
+    'D',
     'Extensible Markup Language 1.0',
     'Fortran',
     'Golang',
Repository: coala/coala

Issue:
require_setting docstring contains strange " and following"
In require_setting we see

```
    :param arr:          A list containing a description in [0] and the name
                         of the bears who need this setting in [1] and
                         following.
```

"and following" should be removed.


Discussion:

Resolving patch:
diff --git a/coalib/output/ConsoleInteraction.py b/coalib/output/ConsoleInteraction.py
--- a/coalib/output/ConsoleInteraction.py
+++ b/coalib/output/ConsoleInteraction.py
@@ -547,8 +547,7 @@ def require_setting(setting_name, arr, section):
 
     :param setting_name: Name of the setting missing
     :param arr:          A list containing a description in [0] and the name
-                         of the bears who need this setting in [1] and
-                         following.
+                         of the bears who need this setting in [1].
     :param section:      The section the action corresponds to.
     :param return:       Returns the setting value that was requested from the
                          user.


Test patch:
Repository: coala/coala

Issue:
Result.py: Add docstring regarding the case that line or column is None
The output generated by coala can have ```line``` being ```None``` or ```column``` being ```None```.

```column = None``` means there is an error with the whole line.
```line = None``` means the whole file. The reason behind it is that it's an unknown line means it can occur anywhere in the file.

All combinations with None values and numbers for line and column are allowed, except ```line=None``` and ```column=<some number>```

This should be clarified in the documentation.

(ref: http://api.coala.io/en/latest/coalib.results.html#module-coalib.results.Result)


Discussion:
@li-boxuan do you want to work on it?

@newbazz I'm currently working on other issues. Take it if you want. :-)
@hritikhks You need to get one newcomer issue merged/approved first.
@li-boxuan , can i work on this ?
@li-boxuan , in the Result.py file i see in line 155 ans 156 line and column have been set to none. Shall i add 2 docstrings below them ?
@ananyaarun You can do as what you say first, create a PR and then reviewers can comment and discuss about what the best place should be.

Resolving patch:
diff --git a/coalib/results/Result.py b/coalib/results/Result.py
--- a/coalib/results/Result.py
+++ b/coalib/results/Result.py
@@ -177,8 +177,12 @@ def from_values(cls,
             The related file.
         :param line:
             The first related line in the file. (First line is 1)
+            line = None means an unknown line occurs anywhere in the file.
         :param column:
             The column indicating the first character. (First character is 1)
+            column = None means there is an error with the whole line.
+            All combinations of None values are allowed for line and column,
+            Except line = None and column = <some number>
         :param end_line:
             The last related line in the file.
         :param end_column:


Test patch:
Repository: coala/coala

Issue:
Typo in docstring
In `coala/coalib/settings/Setting.py`,
In line 174, the word `of` should be replaced with `off`. 


Discussion:
Please assign this to me

@budukhyash Ask in the [main channel](https://gitter.im/coala/coala) to get it assigned to you.

Resolving patch:
diff --git a/coalib/settings/Setting.py b/coalib/settings/Setting.py
--- a/coalib/settings/Setting.py
+++ b/coalib/settings/Setting.py
@@ -171,7 +171,7 @@ def __init__(self,
                                            to this value.
         :param origin:                     The originating file. This will be
                                            used for path conversions and the
-                                           last part will be stripped of. If
+                                           last part will be stripped off. If
                                            you want to specify a directory as
                                            origin be sure to end it with a
                                            directory separator.


Test patch:
Repository: coala/coala

Issue:
Small typo in coalib/output/printers/LogPrinter.py
Should read responsibility instead of reponsibility.



Discussion:

Resolving patch:
diff --git a/coalib/output/printers/LogPrinter.py b/coalib/output/printers/LogPrinter.py
--- a/coalib/output/printers/LogPrinter.py
+++ b/coalib/output/printers/LogPrinter.py
@@ -85,7 +85,7 @@ def log_exception(self,
 
     def log_message(self, log_message, **kwargs):
         """
-        It is your reponsibility to implement this method, if you're using this
+        It is your responsibility to implement this method, if you're using this
         mixin.
         """
         raise NotImplementedError


Test patch:
Repository: coala/coala

Issue:
Required changes to sync moban



Discussion:

Resolving patch:
diff --git a/setup.py b/setup.py
--- a/setup.py
+++ b/setup.py
@@ -438,9 +438,9 @@ def read_requirements(filename):
 
 if __name__ == '__main__':
     pip_version = LooseVersion(pip.__version__)
-    if pip_version < LooseVersion('9.0.1'):
-        raise RuntimeError('Version of pip is less than 9.0.1. '
-                           'Consider upgrading pip to pip~=9.0.1')
+    if pip_version < LooseVersion('9.0.3'):
+        raise RuntimeError('Version of pip is less than 9.0.3. '
+                           'Consider upgrading pip to pip~=9.0.3')
     setup(name='coala',
           version=VERSION,
           description=DESCRIPTION,


Test patch: