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Marvels Comics: X-Men: "How I Learned to Love the Bomb" (bersama Sean Phillips, one-shot, 2000)

Volume 1 (hc, 352 pages, 2002, ) collects:

"The Tomorrow People" (bersama Adam Kubert dan Andy Kubert, in #1–6, 2000–2001)

"Return to Weapon X" (bersama Adam Kubert, Tom Raney dan Tom Derenick, in #7–12, 2001–2002)

Volume 2 (hc, 336 pages, 2003, ) collects:

"World Tour" (bersama Adam Kubert dan Chris Bachalo, in #15–20, 2002)

"Hellfire & Brimstone" (bersama Adam Kubert dan Kaare Andrews, in #21–25, 2002–2003)

Volume 3 (hc, 312 pages, 2003, ) collects:

Ultimate War #1–4 (bersama Chris Bachalo, 2003)

"Return of the King" (bersama Ben Lai, David Finch dan Adam Kubert, in #26–33, 2003)

Enemy of the State: The Complete Edition (hc, 352 pages, 2006, ; tpb, 2008, ) collects:

"Enemy of the State" (bersama John Romita, Jr., in #20–25, 2004–2005)

"Agent of S.H.I.E.L.D." (bersama John Romita, Jr., in #26–31, 2005)

"Prisoner Number Zero" (bersama Kaare Andrews, in #32, 2005)

Old Man Logan (hc, 224 pages, 2009, ; tpb, 2010, ) collects:

"Old Man Logan" (bersama Steve McNiven, in #66–72 dan Old Man Logan Giant-Sized Special, 2008–2009)

The Ultimates (hc, 400 pages, 2004, ; tpb, 2010, ) collects:

"Super-Human"  (bersama Bryan Hitch, in #1–6, 2002)

"Homeland Security" (bersama Bryan Hitch, #7–13, 2002–2004)

The Ultimates 2 (hc, 464 pages, 2007, ; tpb, 2010, ) collects:

"Gods and Monsters" (bersama Bryan Hitch, #1–6, 2005)

"The Reserves" (bersama Steve Dillon, Annual #1, 2005)

"Grand Theft America" (bersama Bryan Hitch, #7–13, 2005–2007)

Omnibus (collects v1 #1–13, v2 #1–13 dan Annual #1, hc, 896 pages, 2009, )

411 #1: "Tit-for-Tat" (bersama Frank Quitely, Marvel, 2003)

Trouble #1–5 (bersama Terry Dodson, 2003) collected as Trouble (hc, 120 pages, 2011, )

Marvel Knights Spider-Man (bersama Terry Dodson dan Frank Cho, 2004–2005) collected as:

Down Among the Dead Men (collects #1–4, tpb, 96 pages, 2004, )

Venomous (collects #5–8, tpb, 96 pages, 2005, )

The Last Stand (collects #9–12, tpb, 96 pages, 2005, )

Marvel Knights Spider-Man (collects #1–12, hc, 304 pages, 2005, )

Volume 1 (hc, 320 pages, 2005, ) includes:

"The Fantastic" (bersama Brian Michael Bendis dan Adam Kubert, in #1–4, 2004)

Volume 2 (hc, 240 pages, 2006, ) includes:

"Inhuman" (bersama Jae Lee, in Annual #1, 2005)

Volume 3 (hc, 296 pages, 2007, ) collects:

"Crossover" (bersama Greg Land, in #21–23, 2005)

"Tomb of Namor" (bersama Greg Land, in #24–26, 2005–2006)

"President Thor" (bersama Greg Land dan Mitch Breitweiser, in #27–29, 2006)

"Frightful" (bersama Greg Land dan Mitch Breitweiser, in #30–32, 2006)

World's Greatest (hc, 200 pages, 2009, ; tpb, 2009, ) collects:

"World's Greatest" (bersama Bryan Hitch, in #554–557, 2008)

"The Galactus Engine" (bersama Bryan Hitch, in #558–561, 2008–2009)

The Master of Doom (hc, 248 pages, 2009, ; tpb, 2010, ) collects:

"Mr. and Mrs. Thing" (bersama Bryan Hitch, in #562–565, 2009)

"Doom's Master" (bersama Bryan Hitch, Joe Ahearne, Neil Edwards dan Stuart Immonen, in #566–569, 2009)

Civil War #1–7 (bersama Steve McNiven, 2006–2007) collected as CW (tpb, 208 pages, 2007, ; hc, 512 pages, 2008, )

Marvel 1985 #1–6 (bersama Tommy Lee Edwards, 2008) collected as M1985 (hc, 176 pages, 2009, ; tpb, 2009, )

Ultimate Comics: Avengers Omnibus (hc, 608 pages, 2012, ) collects:

"The Next Generation" (bersama Carlos Pacheco, in UC-A #1–6, 2009–2010)

"Crime & Punishment" (bersama Leinil Francis Yu, in UC-A 2 #1–6, 2010)

"Blade vs. the Avengers" (bersama Steve Dillon, in UC-A 3 #1–6, 2010–2011)

UC: Avengers vs. New Ultimates #1–6 (bersama Leinil Francis Yu dan Stephen Segovia, 2011)