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Lee, Y. T. "Crossed Molecular Beam Studies and Dynamics of Decomposition of Chemically Activated Radicals", University of Chicago, United States Department of Energy (through predecessor agency the Atomic Energy Commission), (September 1973).

Lee, Y. T. & S. J. Sibener. "Internal Energy Dependence of Molecular Condensation Coefficients Determined from Molecular Beam Surface Scattering Experiments", Lawrence Berkeley Laboratory, University of California, Berkeley, United States Department of Energy, (May 1978).

Lee, Y. T., Sibener, S. J. & R. J. Buss. "Development of a Supersonic Atomic Oxygen Nozzle Beam Source for Crossed Beam Scattering Experiments", Lawrence Berkeley Laboratory, University of California, Berkeley, United States Department of Energy, (May 1978).

Lee, Y. T., Baseman, R. J., Guozhong, H. & R. J. Buss. "Reaction Mechanism of Oxygen Atoms with Unsaturated Hydrocarbons by the Crossed-Molecular-Beams Method", Lawrence Berkeley Laboratory, University of California, Berkeley, United States Department of Energy-Office of Basic Energy Science, (April 1982).

Lee, Y. T. "Molecular-beam Studies of Primary Photochemical Processes", Lawrence Berkeley Laboratory, University of California, Berkeley, United States Department of Energy, (December 1982).

Lee, Y. T., Continetti, R. E. & B. A. Balko. "Molecular Beam Studies of Hot Atom Chemical Reactions: Reactive Scattering of Energetic Deuterium Atoms", Lawrence Berkeley Laboratory, United States Department of Energy, (February 1989).

Lee, Y.T., "Energy, Environment, and the Responsibility of Scientists", (2007).