GitHub repository: shishenyxx/PASM
Primary language: Python
Description: Here are scripts for Postzygotic Amplicon Sequencing for Mosaicism (PASM) and some codes for the method we now define as Massive Parallel Amplicon Sequencing (MPAS). We provided perl+R versions, python versions, and an extended snakemake version with all additional annotations. The scripts are useful for the calculation of variant allelic fraction based on deep sequencing data as well as additional annotations for mosaic variants.