GitHub repository: Aleksobrad/TCR-analysis
Primary language: R
Created: 2016-01-11T22:25:28Z
Description: Code used for analysis of tabular CDR3 T-Cell Receptor Sequencing Data. Includes functions for Jensen-Shannon Divergence, Clonality, CD4/CD8 sort disambiguation, and alloreactivity determination from matched unstimulated and stimulated samples, with adjustable sensitivity thresholds.