GitHub repository: Kirovez/BLAST_run_parse_mask
Created: 2016-03-24T07:13:16Z
Description: Python 3.4 script to run BLASTn and create  1) fasta file contained query sequences showed similarity to sbjct; 2) BLAST_MASK file with query sequences with masked 'n' regions participated in alignment;  3) fasta file of queries which did not show similarity; 4) HIT fasta file contained parts of sequences participated in alignment.