GitHub repository: CDCgov/spheres-augur-build
Primary language: Python
Created: 2020-09-15T14:05:06Z
Description: This repository analyzes viral genomes using Nextstrain to understand how SARS-CoV-2, the virus that is responsible for the COVID-19 pandemic, evolves and spreads. This is a copy of the original Nextstrain ncov repository, which will (by default) build augur all 50 states + DC + PR using the same parameters and subsampling strategy.