FC Bayern Munich II Recent record Recent record

| Season | Division | Tier | Position_ | Cup_ |
|---|---|---|---|---|
| 1994–95 | Regionalliga Süd | III | 7 | Quarter-final |
| 1995–96 | Regionalliga Süd | III | 13 | Round 1 |
| 1997–97 | Regionalliga Süd | III | 8 | DNQ |
| 1997–98 | Regionalliga Süd | III | 6 | DNQ |
| 1998–99 | Regionalliga Süd | III | 8 | DNQ |
| 1999–00 | Regionalliga Süd | III | 5 | DNQ |
| 2000–01 | Regionalliga Süd | III | 9 | DNQ |
| 2001–02 | Regionalliga Süd | III | 10 | DNQ |
| 2002–03 | Regionalliga Süd | III | 4 | Round 1 |
| 2003–04 | Regionalliga Süd | III | 1 | DNQ |
| 2004–05 | Regionalliga Süd | III | 6 | Quarter-final |
| 2005–06 | Regionalliga Süd | III | 11 | DNQ |
| 2006–07 | Regionalliga Süd | III | 8 | DNQ |
| 2007–08 | Regionalliga Süd | III | 8 | DNQ |
| 2008–09 | 3. Liga | III | 5 | — |
| 2009–10 | 3. Liga | III | 8 | — |