1999–2000 ISU Junior Grand Prix Medal table Medal table

| Rank_ | Nation | Gold | Silver | Bronze | Total |
|---|---|---|---|---|---|
| 1 | Russia | 12 | 7 | 11 | 30 |
| 2 | United States | 8 | 12 | 6 | 26 |
| 3 | Canada | 4 | 1 | 5 | 10 |
| 4 | Ukraine | 3 | 2 | 4 | 9 |
| 5 | France | 0 | 5 | 2 | 7 |
| 6 | China | 3 | 2 | 0 | 5 |
| 6 | Japan | 2 | 1 | 2 | 5 |
| 7 | Germany | 2 | 1 | 1 | 4 |
| 8 | Italy | 1 | 0 | 2 | 3 |
| 9 | Estonia | 1 | 1 | 0 | 2 |
| 9 | Czech Republic | 0 | 1 | 1 | 2 |
| 10 | United Kingdom | 0 | 1 | 0 | 1 |
| 10 | Hungary | 0 | 1 | 0 | 1 |
| 10 | Sweden | 0 | 1 | 0 | 1 |
| 11 | Denmark | 0 | 0 | 1 | 1 |
| 11 | Switzerland | 0 | 0 | 1 | 1 |