List of RNA structure prediction software Inter molecular interactions: MicroRNA:UTR Inter molecular interactions: MicroRNA:UTR

| Name_ | Species_Specific | Intra_molecular_structure | Comparative | Link |
|---|---|---|---|---|
| Diana-microT | human, mouse | no | yes | webserver |
| MicroTar | no | no | no | sourcecode |
| miTarget | no | no | no | webserver |
| miRror | no | no | no | webserver |
| PicTar | 8 vertebrates | no | yes | predictions |
| PITA | no | yes | no | executable, webserver, predictions |
| RNA22 | no | no | no | predictions custom |
| RNAhybrid | no | no | no | sourcecode, webserver |
| Sylamer | no | no | no | sourcecode webserver |
| TAREF | Yes | no | no | server/sourcecode |
| p-TAREF | Yes | no | no | server/standalone |
| TargetScan | vertebrates, flies, nematodes | evaluated indirectly | yes | sourcecode, webserver |