1989–90 Football Conference Top scorers in order of league goals Top scorers in order of league goals

| Player | Club | League | FA_Cup | FA_Trophy | League_Cup | Total |
|---|---|---|---|---|---|---|
| Robbie Cooke | Kettering Town | 28 | 0 | 0 | 0 | 28 |
| Efan Ekoku | Sutton | 25 | 0 | 0 | 0 | 25 |
| Simon Read | Farnborough Town | 23 | 2 | 0 | 1 | 26 |
| Ian Thompson | Merthyr Tydfil | 21 | 3 | 0 | 0 | 24 |
| John Borthwick | Darlington | 19 | 2 | 0 | 1 | 22 |
| Mark Carter | Runcorn | 19 | 0 | 2 | 1 | 22 |
| Mike Doherty | Runcorn | 18 | 1 | 0 | 0 | 19 |
| Gary Bull | Barnet | 17 | 5 | 0 | 3 | 25 |
| Andrew Clarke | Barnet | 17 | 2 | 0 | 0 | 19 |
| Paul Furlong | Enfield | 17 | 0 | 1 | 1 | 19 |
| Paul Gorman | Fisher Athletic | 17 | 0 | 0 | 0 | 17 |