GAPrune: Gradient-Alignment Pruning for Domain-Aware Embeddings
Authors: name: Yixuan Tang, name: Yi Yang

Domain-specific embedding models have shown promise for applications that
require specialized semantic understanding, such as coding agents and financial
retrieval systems, often achieving higher performance gains than general
models. However, state-of-the-art embedding models are typically based on LLMs,
which contain billions of parameters, making deployment challenging in
resource-constrained environments. Model compression through pruning offers a
promising solution, but existing pruning methods treat all parameters
uniformly, failing to distinguish between general semantic representations and
domain-specific patterns, leading to suboptimal pruning decisions. Thus, we
propose GAPrune, a pruning framework that addresses this challenge by
considering both domain importance and preserving general linguistic
foundation. Our method uses Fisher Information to measure importance and
general-domain gradient alignment to assess parameter behavior, then combines
these signals using our Domain Alignment Importance (DAI) scoring. Lower DAI
scores indicate that the parameter is either less important for the domain task
or creates conflicts between domain and general objectives. Experiments on two
domain benchmarks, FinMTEB and ChemTEB, show that GAPrune maintains performance
within 2.5% of dense models in one-shot pruning at 50% sparsity, while
outperforming all baselines. With retraining in 100 steps, GAPrune achieves
+4.51% improvement on FinMTEB and +1.73% on ChemTEB, demonstrating that our
pruning strategy not only preserves but enhances domain-specific capabilities.
Our findings demonstrate that principled pruning strategies can achieve model
compression and enhanced domain specialization, providing the research
community with a new approach for development.