hansen7/spatialagent_human huggingface dataset:
Reasoning: First 50 - regional/structural, cell type and subclass/subtype annotation, neuronal activation
Note: In Schizophrenia, downregulation of neuronal activity in the DLPFC has been reported (Smucny et al., 2022 - https://www.nature.com/articles/s41386-021-01089-0). What neuronal cell types activity is affected and what non-neuronal and other cell types are proximal to the affected neuronal cell types?
Gene: NRXN3
Rank: 51.0
Reasoning: Pre synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: SYN1
Rank: 52.0
Reasoning: Pre synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: SYN2
Rank: 53.0
Reasoning: Pre synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: SYN3
Rank: 54.0
Reasoning: Pre synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: SYP
Rank: 55.0
Reasoning: Pre synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: SYT1
Rank: 56.0
Reasoning: Pre synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: STX1A
Rank: 57.0
Reasoning: Pre synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: VAMP2
Rank: 58.0
Reasoning: Pre synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: VGAT
Rank: 59.0
Reasoning: Pre synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: VGLUT1
Rank: 60.0
Reasoning: Pre synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: VGLUT2
Rank: 61.0
Reasoning: Pre synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: VGLUT3
Rank: 62.0
Reasoning: Pre synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: GAP43
Rank: 63.0
Reasoning: Pre synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: VMAT2
Rank: 64.0
Reasoning: Pre synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: NRG1
Rank: 65.0
Reasoning: Post synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: DLG4
Rank: 66.0
Reasoning: Post synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: DLG3
Rank: 67.0
Reasoning: Post synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: SHANK1
Rank: 68.0
Reasoning: Post synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: SHANK3
Rank: 69.0
Reasoning: Post synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: HOMER1
Rank: 70.0
Reasoning: Post synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: HOMER2
Rank: 71.0
Reasoning: Post synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: HOMER3
Rank: 72.0
Reasoning: Post synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers
Gene: GPHN
Rank: 73.0
Reasoning: Post synaptic marker
Note: https://www.alomone.com/synaptic-markers-for-pre-and-postsynaptic-regions?srsltid=AfmBOorvpugcJXthma_V9UY2fua_gCkNcxyRF6fHMPELLMW3HA5V5iv0#Presynaptic-Markers