#NEWLINE# def __init__( self , fname ) : #NEWLINE# #INDENT# self . fname = fname #NEWLINE# Model . __init__ ( self ) #NEWLINE# self . gtf = GTF ( gene . fname ) #NEWLINE# gene_gen = self . gtf . genes #NEWLINE# gene = gene_gen . next ( ) #NEWLINE# self . has_isoform = ( 'isoform_id' in gene . attributes ) #NEWLINE# self . has_biotype = ( 'gene_biotype' in gene . attributes )