gebhart/patrepeval huggingface dataset:
Lactose crystallisation and early Maillard reaction in skim milk powder and whey protein concentrates (2005)

Lactose crystallisation and Maillard reaction are two major modifications occurring in milk and whey powders during processing and storage. In this work, the aim was first to monitor the solid-state early Maillard reaction (EMR) in whey protein concentrates (WPC) heated at 60 C and various water activities, and then, to characterise the physical changes that occur as a consequence of heat treatment in skim milk powder (SMP) and WPCs. After a w adjustment, SMP and WPC were heated at 60 C in hermetic conditions to induce an amino-sugar reaction. Furosine analysis (% of blocked lysine) was used to monitor the progress of EMR. The results showed that the kinetic of EMR was linked to the initial a w of the powders. Heating of SMP may lead to the crystallisation of lactose in humidified powders, without apparently affecting the progress of EMR. Surprisingly, lactose crystallisation -monitored by micro-Differential Scanning Calorimetry -was easily induced in heated SMP, whereas it was delayed or even inhibited in WPC. The results showed that this effect was dependent on the protein/lactose ratio in WPCs.
Polystyrene/graphene composite electrode fabricated by in situ polymerization for capillary electrophoretic determination of bioactive constituents in <i>Herba Houttuyniae</i> (2011)

A novel graphene/polystyrene composite electrode was developed for the enhanced amperometric detection of CE in this work. The composite electrode was fabricated on the basis of the in situ polymerization of a mixture of graphene and prepolymerized styrene in the bore of a piece of fused-silica capillary under heat. SEM, XRD, and FTIR offered insights into the nature of the composite. The results indicated that graphenes were well dispersed and embedded throughout the PS matrix to form an interconnected conducting network. The performance of this unique graphene-based detector has been demonstrated by separating and detecting rutin, isoquercitrin, quercitrin, and chlorogenic acid in Herba Houttuyniae (a traditional Chinese medicine) in combination with CE. The prepared graphene-based CE detector offered significantly lower detection potential, yielded enhanced signal-to-noise characteristics, and exhibited high resistance to surface fouling and enhanced stability. It showed long-term stability and reproducibility with a relative standard deviation of 3.1% for the peak current (n = 15).
Synthesis of Chiral α‐Fluoroketones through Catalytic Enantioselective Decarboxylation (2005)

Ein innovatives Konzept liefert die optisch aktiven α-Fluorketone 3 in hohen Ausbeuten und mit bis zu 99 % ee ausgehend von racemischen α-Fluor-β-ketoestern 1 in Gegenwart des chiralen Phosphanyloxazolin-Liganden 2. Durch diese palladiumkatalysierte Decarboxylierung/Allylierung können überdies ausschließlich kohlenstoffsubstituierte quartäre Stereozentren hoch enantioselektiv aufgebaut werden. dba=Dibenzylidenaceton.
Immunotherapy of murine prostate cancer using whole tumour cells killed <i>ex vivo</i> by cytosine deaminase/5‐fluorocytosine suicide‐gene therapy (2005)

The immunogenicity of irradiated tumour cells is enhanced when they are killed ex-vivo using suicide-gene therapy. This approach would be clinically applicable in terms of ease of vaccine production, safety, storage and avoidance of potential toxicities of in vivo gene transfer.
Dual frequency open-loop electric potential microscopy for local potential measurements in electrolyte solution with high ionic strength (2012)

Recent development of open-loop electric potential microscopy (OL-EPM) has enabled to measure local potential distribution at a solid/liquid interface. However, the operating environment of OL-EPM has been limited to a weak electrolyte solution (<1 mM). This has significantly limited its application range in biology and chemistry. To overcome this limitation, we have developed dual frequency (DF) mode OL-EPM. In the method, an ac bias voltage consisting of two frequency components at f(1) and f(2) is applied between a tip and sample. The local potential is calculated from the amplitudes of the f(1) and |f(1) - f(2)| components of the electrostatic force. In contrast to the conventional single frequency (SF) mode OL-EPM, the detection of the 2f(1) component is not required in DF mode. Thus, the maximum bias modulation frequency in DF mode is twice as high as that in SF mode. The high bias modulation frequency used in DF mode prevents the generation of electrochemical reactions and redistribution of ions and water, which enables to operate OL-EPM even in a strong electrolyte solution. In this study, we have performed potential measurements of nanoparticles on a graphite surface in 1 and 10 mM NaCl solution. The results demonstrate that DF mode OL-EPM allows measurements of local potential distribution in 10 mM electrolyte solution.
The polymorphic epithelial mucin MUC1 in human endometrium is regulated with maximal expression in the implantation phase (1994)

After ovulation, progesterone stimulates a temporally regulated secretory transformation in human endometrial epithelium. Using a combination of immunohistochemistry, and Western and Northern blotting, we demonstrate that 1) the polymorphic epithelial mucin MUC1 is secreted by human endometrial epithelium; 2) low levels of both mRNA and core protein are present in the preovulatory phase of the menstrual cycle; 3) mRNA levels increase several- fold after ovulation, consistent with transcriptional regulation by progesterone; 4) there is an increase in translation product in postovulatory endometrium; and 5) the tandem repeat domain of the MUC-1 polypeptide is glycosylated in endometrium.
Solvent extraction as a means of preparing homogeneous lignin fractions (2011)

Abstract Sequential extraction method was applied to lignins from hardwood and softwood isolated by kraft and VTT organosolv processes. Solvent extraction was found to fractionate lignin according to the molecular weight: small molecular weight lignin is dissolved in the organic solvents and the lignin with higher molecular weight is enriched into the residue. Isolated acetone fractions of lignin are more homogeneous with narrow molecular weight distributions. Based on the 31 P NMR results, both total hydroxyl content and the content of phenolic hydroxyl units are higher in the acetone fraction than in the residue. Pyrolysis-GC/MS of all lignins showed that p- hydroxy phenols are enriched to the residues. Preferential dissolution of syringyl type lignin in acetone was observed for hardwood kraft lignin, whereas the opposite behavior was seen for the hardwood organosolv lignin. Glass transition temperatures of all acetone soluble fractions were notably low compared to starting and residue lignins, which gives possibilities for future applications as a material with specific properties.
WCET Analysis for Multi-Core Processors with Shared L2 Instruction Caches (2008)

Multi-core chips have been increasingly adopted by microprocessor industry. For real-time systems to safely harness the potential of multi-core computing, designers must be able to accurately obtain the worst-case execution time (WCET) of applications running on multi-core platforms, which is very challenging due to the possible runtime inter-core interferences in using shared resources such as the shared L2 caches. As the first step toward time-predictable multi-core computing, this paper presents a novel approach to bounding the worst-case performance for threads running on multi-core processors with shared L2 instruction caches. The idea of our approach is to compute the worst-case instruction access interferences between different threads based on the program control flow information of each thread, which can be statically analyzed. Our experiments indicate that the proposed approach can reasonably estimate the worst- case shared L2 instruction cache misses by considering inter-thread instruction conflicts. Also, the WCET of applications running on multi-core processors estimated by our approach is much better than the estimation by simply assuming all L2 instruction accesses are misses.
Amino acid sequence of a heat‐stable enterotoxin isolated from enterotoxigenic <i>Escherichia coli</i> strain 18D (1983)

A heat-stable enterotoxin produced by a strain of enterotoxigenic Escherichia coli 18D was purified by ion-exchange and reversed-phase high-pressure liquid chromatography. The amino acid sequence of the purified toxin was determined by Edman-degradation and a combination of fast atom bombardment mass spectrometry and carboxypeptidase digestion to be Asn-Thr-Phe-Tyr-Cys-Cys-Glu-Leu-Cys-Cys-Asn-Pro-Ala-Cys-Ala-Gly-Cys-Tyr.
Multidimensional coherent pulse addition of ultrashort laser pulses (2015)

Spatially and temporally separated amplification and subsequent coherent addition of femtosecond pulses is a promising performance-scaling approach for ultrafast laser systems. Herein we demonstrate for the first time the application of this multidimensional scheme in a scalable architecture. Applying actively controlled divided-pulse amplification producing up to four pulse replicas that are amplified in two ytterbium-doped step-index fibers (6 μm core), pulse energies far beyond the damage threshold of the single fiber have been achieved. In this proof-of-principle experiment, high system efficiencies are demonstrated at both high pulse energies (i.e., in case of strong saturation) and high accumulated nonlinear phases.
Environmental effects of terpenoid chemicals: a review (1978)

Abstract Entry of terpenes into the atmosphere occurs by volatilization of hydrocarbons from foliage, especially over forest lands. These compounds react photochemically with ozone, causing a blue haze. The total volume of reactive hydrocarbons released naturally appears several times greater than that from man's activities. Diterpenes also enter the environment through surface water runoff. Recently dehydroabietic acid and other terpenoidal compounds were found in ocean sediments, deposited by rivers. Few cases of air pollution can be related to industrial operations or processing of terpenes. Veneer dryer stack gas emissions cause an aesthetic problem, controllable by better modes of operation. Workers in soldering operations require protection from fumes caused by use of rosin cores. Rosin and rosin derivatives are virtually nontoxic to mammals and find use in food packaging applications. Sulfate turpentine is the source of pinenes for manufacture of synthetic flavors and perfumes. Resin acids and related diterpenes are, however, acutely toxic to aquatic organisms and can cause severe problems to fisheries if released in pulp mill wastes. Both monoterpenes and diterpenes are biodegradable. The future widespread use of toxaphene as an insecticide is uncertain because of its toxicity to aquatic fauna and relatively long persistence in soils and sediments. Recent results have demonstrated microbiological uptake of toxaphene components leading to problems of bioaccumulation through the food chain.
Improving conceptual search results reorganization using term-concept mappings retrieved from Wikipedia (2008)

This paper describes a way of improving search engine results conceptual reorganization that uses formal concept analysis. This is done by using redirections to solve conceptual redundancies and by adding preliminary disambiguation and expanding the concept lattice with extra navigation nodes based on Wikipedia’s ontology and strong conceptual links.
Pre-authentication filters (2008)

Recent studies have demonstrated that it is possible to perform public key cryptographic operations on the resource-constrained sensor platforms. However, the significant resource consumption imposed by public key cryptographic operations makes such mechanisms easy targets of Denial- of Service (DoS) attacks. For example, if digital signatures such as ECDSA are used directly for broadcast authentication without further protection, an attacker can simply broadcast forged packets and force the receiving nodes to perform a large number of unnecessary signature verifications, eventually exhausting their battery power. This paper studies how to deal with such DoS attacks when signatures are used for broadcast authentication in sensor networks. In particular, this paper presents two filtering techniques, a group-based filter and a key chain-based filter, to handle DoS attacks against signature verification. Both methods can significantly reduce the number of unnecessary signature verifications that a sensor node has to perform. The analytical results also show that these two techniques are efficient and effective for resource-constrained sensor networks.
Chemically modified cellulose micro- and nanofibrils as paper-strength additives (2017)

Chemically modified cellulose micro- and nanofibrils were successfully used as paper strength additives. Three different kinds of cellulose nanofibrils (CNFs) were studied: carboxymethylated CNFs, periodate-oxidised carboxymethylated CNFs and dopamine-grafted carboxymethylated CNFs, all prepared from bleached chemical fibres of dissolving grade, and one microfibrillated cellulose from unbleached kraft fibres. In addition to mechanical characterization of the final paper sheets the fibril retention, sheet density and sheet morphology were also studied as a function of addition of the four different cellulose fibrils. In general, the cellulose fibrils, when used as additives, significantly increased the tensile strength, Young’s modulus and strain-at-break of the paper sheets. The effects of the different fibrils on these properties were compared and evaluated and used to analyse the underlying mechanisms behind the strengthening effect. The strength-enhancing effect was most pronounced for the periodate-oxidised CNFs when they were added together with polyvinyl amine (PVAm) or poly(dimethyldiallylammonium chloride) (pDADMAC). The addition of periodate-oxidised CNFs, with pDADMAC as retention aid, resulted in a 37% increase in tensile strength at a 2 wt% addition and an 89% increase at a 15 wt% addition (from 67 to 92 and 125 kNm/kg, respectively) compared to a reference with only pDADMAC. Wet-strong sheets with a wet tensile index of 30 kNm/kg were also obtained when periodate-oxidised CNFs and PVAm were combined. This significant increase in wet strength is suggested to be the result of a formation of cross-links between the aldehyde groups, introduced by the periodate oxidation, and hydroxyl groups on the lignocellulosic fibres and the primary amines of PVAm. Even though less significant, there was also an increase in wet tensile strength when pDADMAC was used together with periodate-oxidised fibrils which shows that the aldehyde groups are able to increase the wet strength without the presence of the primary amines of the PVAm. As an alternative method to strengthen the fibre network, carboxymethylated CNFs grafted with dopamine, by an ethyl dimethylaminopropyl carbodiimide coupling, were used as a strength additive. When used as an additive, these CNFs showed a strong propensity to form films on and around the fibres and significantly increased the mechanical properties of the sheets. Their addition resulted in an increase in the Young´s modulus by 41%, from 5.1 to 7.2 GPa, and an increase in the tensile strength index of 98% (from 53 to 105 kNm/kg) with 5 wt% retained dopamine-grafted CNFs.
Novel target genes and a valid biomarker panel identified for cholangiocarcinoma (2012)

Cholangiocarcinoma is notoriously difficult to diagnose, and the mortality rate is high due to late clinical presentation. CpG island promoter methylation is frequently seen in cancer development. In the present study, we aimed at identifying novel epigenetic biomarkers with the potential to improve the diagnostic accuracy of cholangiocarcinoma. Microarray data analyses of cholangiocarcinoma cell lines treated with epigenetic drugs and their untreated counterparts were compared with previously published gene expression profiles of primary tumors and with non-malignant controls. Genes responding to the epigenetic treatment that were simultaneously downregulated in primary cholangiocarcinoma compared with controls (n = 43) were investigated for their promoter methylation status in cancer cell lines from the gastrointestinal tract. Genes commonly methylated in cholangiocarcinoma cell lines were subjected to quantitative methylation-specific polymerase chain reaction in a total of 93 clinical samples (cholangiocarcinomas and non-malignant controls). CDO1, DCLK1, SFRP1 and ZSCAN18, displayed high methylation frequencies in primary tumors and were unmethylated in controls. At least one of these four biomarkers was positive in 87% of the tumor samples, with a specificity of 100%. In conclusion, the novel methylation-based biomarker panel showed high sensitivity and specificity for cholangiocarcinoma. The potential of these markers in early diagnosis of this cancer type should be further explored.
The Inducible CXCR3 Ligands Control Plasmacytoid Dendritic Cell Responsiveness to the Constitutive Chemokine Stromal Cell–derived Factor 1 (SDF-1)/CXCL12 (2003)

The recruitment of selected dendritic cell (DC) subtypes conditions the class of the immune response. Here we show that the migration of human plasmacytoid DCs (pDCs), the blood natural interferon alpha-producing cells, is induced upon the collective action of inducible and constitutive chemokines. Despite expression of very high levels of CXCR3, pDCs do not respond efficiently to CXCR3 ligands. However, they migrate in response to the constitutive chemokine stromal cell-derived factor 1 (SDF-1)/CXCL12 and CXCR3 ligands synergize with SDF-1/CXCL12 to induce pDC migration. This synergy reflects a sensitizing effect of CXCR3 ligands, which, independently of a gradient and chemoattraction, decrease by 20-50-fold the threshold of sensitivity to SDF-1/CXCL12. Thus, the ability of the constitutive chemokine SDF-1/CXCL12 to induce pDC recruitment might be controlled by CXCR3 ligands released during inflammation such as in virus infection. SDF-1/CXCL12 and the CXCR3 ligands Mig/CXCL9 and ITAC/CXCL1 display adjacent expression both in secondary lymphoid organs and in inflamed epithelium from virus-induced pathologic lesions. Because pDCs express both the lymph node homing molecule l-selectin and the cutaneous homing molecule cutaneous lymphocyte antigen, the cooperation between inducible CXCR3 ligands and constitutive SDF-1/CXCL12 may regulate recruitment of pDCs either in lymph nodes or at peripheral sites of inflammation.
Alzheimer disease (1981)

Eleven outpatients with Alzheimer disease of moderate severity completed a double-blind placebo-controlled crossover trial of lecithin. Each patient received 10 gm three times daily of a placebo for 3 months. Plasma choline levels rose threefold and remained at that level throughout the lecithin administration period. A significant difference between mean baseline scores and treatment scores was found on tests of new learning ability, indicating a practice effect in these tests. However, there were no differences between mean placebo and lecithin scores on any of the psychological test measures.
The Role of Genetic Variation Near Interferon-Kappa in Systemic Lupus Erythematosus (2010)

Systemic lupus erythematosus (SLE) is a systemic autoimmune disease characterized by increased type I interferons (IFNs) and multiorgan inflammation frequently targeting the skin. IFN-kappa is a type I IFN expressed in skin. A pooled genome-wide scan implicated the IFNK locus in SLE susceptibility. We studied IFNK single nucleotide polymorphisms (SNPs) in 3982 SLE cases and 4275 controls, composed of European (EA), African-American (AA), and Asian ancestry. rs12553951C was associated with SLE in EA males (odds ratio = 1.93, P = 2.5 x 10(-4)), but not females. Suggestive associations with skin phenotypes in EA and AA females were found, and these were also sex-specific. IFNK SNPs were associated with increased serum type I IFN in EA and AA SLE patients. Our data suggest a sex-dependent association between IFNK SNPs and SLE and skin phenotypes. The serum IFN association suggests that IFNK variants could influence type I IFN producing plasmacytoid dendritic cells in affected skin.
Packaging of emerging optical interconnection technologies in telecom platforms (2002)

Emerging optical interconnection technologies offer both new capabilities and packaging challenges for the system designer. These emerging technologies include parallel optics, high bandwidth plastic optical fiber, and new VCSELs which cover an increasing range of wavelengths. Parallel optics offers low cost interconnection with perhaps the best use of backplane space. Plastic optical fiber (POF) has been demonstrated with high bandwidths above 1 GHz/spl middot/km and low loss between 850 nm and 1300 nm. VCSELs will soon be available over a range of wavelengths spanning the spectrum from at least 650 nm to at least 1300 nm. Never before have systems designers of computing and telecommunication systems had so many choices for optical interconnection and different packaging approaches. Goals for packaging may include the ability to make very small systems, the ability to distribute systems to solve thermal problems, achieving good fiber management, getting the most bandwidth on and off and printed wiring board at the least use of space and the least disruption of backplane routine area, being able to insert boards having both optical and electrical interconnects without manual intervention with connectors, and the ability to flexibly manage heat dissipation in a system and on circuit boards. These goals will be discussed in terms of emerging technologies.
Transcriptomic profiling and genomic mutational analysis of Human coronavirus (HCoV)-229E -infected human cells (2021)

Human coronaviruses (HCoVs) cause mild to severe respiratory infection. Most of the common cold illnesses are caused by one of four HCoVs, namely HCoV-229E, HCoV-NL63, HCoV-HKU1 and HCoV-OC43. Several studies have applied global transcriptomic methods to understand host responses to HCoV infection, with most studies focusing on the pandemic severe acute respiratory syndrome coronavirus (SARS-CoV), Middle East respiratory syndrome CoV (MERS-CoV) and the newly emerging SARS-CoV-2. In this study, Next Generation Sequencing was used to gain new insights into cellular transcriptomic changes elicited by alphacoronavirus HCoV-229E. HCoV-229E-infected MRC-5 cells showed marked downregulation of superpathway of cholesterol biosynthesis and eIF2 signaling pathways. Moreover, upregulation of cyclins, cell cycle control of chromosomal replication, and the role of BRCA1 in DNA damage response, alongside downregulation of the cell cycle G1/S checkpoint, suggest that HCoV-229E may favors S phase for viral infection. Intriguingly, a significant portion of key factors of cell innate immunity, interferon-stimulated genes (ISGs) and other transcripts of early antiviral response genes were downregulated early in HCoV-229E infection. On the other hand, early upregulation of the antiviral response factor Apolipoprotein B mRNA editing enzyme catalytic subunit 3B (APOBEC3B) was observed. APOBEC3B cytidine deaminase signature (C-to-T) was previously observed in genomic analysis of SARS-CoV-2 but not HCoV-229E. Higher levels of C-to-T mutations were found in countries with high mortality rates caused by SARS-CoV-2. APOBEC activity could be a marker for new emerging CoVs. This study will enhance our understanding of commonly circulating HCoVs and hopefully provide critical information about still-emerging coronaviruses.
Brentuximab Vedotin (SGN-35) in Patients With Relapsed or Refractory Systemic Anaplastic Large-Cell Lymphoma: Results of a Phase II Study (2012)

Brentuximab vedotin induced objective responses in the majority of patients and CRs in more than half of patients with recurrent systemic ALCL. Targeted therapy with this CD30-directed antibody-drug conjugate may be an effective treatment for relapsed or refractory systemic ALCL and warrants further studies in front-line therapy.