gebhart/patrepeval huggingface dataset:
Carbon-Pt Nanoparticles Modified TiO<SUB>2</SUB> Nanotubes for Simultaneous Detection of Dopamine and Uric Acid (2011)

The present work describes sensing application of modified TiO2 nanotubes having carbon-Pt nanoparticles for simultaneous detection of dopamine and uric acid. The TiO2 nanotubes electrode was prepared using anodizing method, followed by electrodeposition of Pt nanoparticles onto the tubes. Carbon was deposited by decomposition of polyethylene glycol in a tube furnace to improve the conductivity. The C-Pt-TiO2 nanotubes modified electrode was characterized by cyclic voltammetry and differential pulse voltammetry methods. The modified electrode displayed high sensitivity towards the oxidation of dopamine and uric acid in a phosphate buffer solution (pH 7.00). The electro-oxidation currents of dopamine and uric acid were linearly related to the concentration over a wide range of 3.5 x 10(-8) M to 1 x 10(-5) M and 1 x 10(-7) M to 3 x 10(-5) M respectively. The limit of detection was determined as 2 x 10(-10) M for dopamine at signal-to-noise ratio of 3. The interference of uric acid was also investigated. Electro-oxidation currents of dopamine in the presence of fix amount of uric acid represented a linear behaviour towards successive addition of dopamine in range of 1 x 10(-7) M to 1 x 10(-5) M. Furthermore, in a solution containing dopamine, uric acid and ascorbic acid the overlapped oxidation peaks of dopamine and ascorbic acid could be easily separated by using C-Pt-TiO2 nanotubes modified electrode.
Nuclease sensitive element binding protein 1 gene disruption results in early embryonic lethality (2006)

Nuclease sensitive element binding protein 1 (NSEP1) is a member of the EFIA/NSEP1/YB-1 family of DNA-binding proteins whose members share a cold shock domain; it has also been termed DNA-binding protein B and Y box binding protein-1 because of its recognition of transcriptional regulatory elements. In addition, NSEP1 functions in the translational regulation of renin, ferritin, and interleukin 2 transcripts, and our laboratory has reported that it plays a role in the biosynthesis of selenium-containing proteins. To test the functional importance of NSEP1 in murine embryonic development, we have utilized a clone of ES cells in which the NSEP1 gene had been disrupted by integration of a plasmid gene-trapping vector into the seventh exon. Injection of these cells into C57BL/6 blastocysts resulted in 11 high percentage chimeric mice; crosses to wild type C57BL/6 mice generated 82 F1 agouti mice, indicating germ line transmission of the ES cell clone, but genotyping showed no evidence of the disrupted allele in any of these agouti offspring even though spermatozoa from four of five tested mice contained the targeted allele. Embryos harvested after timed matings of chimeric male mice demonstrated only the wildtype allele in 27 embryos tested at E7.5, E12.5, and E18.5. These results suggest that gene targeting of NSEP1 induces a lethal phenotype in early embryos, due to either haploinsufficiency of NSEP1 or formation of a dominant negative form of the protein. In either case, these data indicate the functional importance of the NSEP1 gene in murine early embryonic development.
Frequent hypomethylation of multiple genes overexpressed in pancreatic ductal adenocarcinoma. (2003)

To investigate the relationship between DNA hypomethylation and gene overexpression in pancreatic cancer, we analyzed the methylation status of a subset of 18 genes previously identified by global gene expression studies as overexpressed in pancreatic cancer tissues compared with normal pancreas. For comparison, we determined the methylation status of 14 genes not known to be overexpressed in pancreatic cancer. Methylation-specific PCR analysis revealed that 19 of these 32 genes were methylated at their 5' CpGs in normal pancreas. We then analyzed these 19 genes for their methylation pattern in pancreatic cancers and found that all 7 of the genes (claudin4, lipocalin2, 14-3-3sigma, trefoil factor2, S100A4, mesothelin, and prostate stem cell antigen) that were overexpressed in the neoplastic cells of pancreatic cancers and not expressed in normal pancreatic duct displayed a high prevalence of hypomethylation in pancreatic cancer cell lines and primary pancreatic carcinomas. By contrast, only 1 of 12 genes not overexpressed in pancreatic cancer demonstrated hypomethylation (P = 0.0002). In pancreatic cancer cell lines that retained methylation of 1 or more of the 7 aforementioned overexpressed and hypomethylated genes, treatment with 5-aza-2'-deoxycytidine or with trichostatin A, either alone or in combination, almost invariably reactivated the transcription of each of these 7 genes. These results indicate that gene hypomethylation is a frequent epigenetic event in pancreatic cancer and is commonly associated with the overexpression of affected genes.
Two Functionally Distinct Forms of a Retroviral Receptor Explain the Nonreciprocal Receptor Interference among Subgroups B, D, and E Avian Leukosis Viruses (2001)

Subgroups B, D, and E avian leukosis viruses (ALV-B, -D, and -E) share the same chicken receptor, TVB(S1), a tumor necrosis factor receptor (TNFR)-related protein. These viruses, however, exhibit nonreciprocal receptor interference (NRI): cells preinfected with ALV-B or ALV-D are resistant to superinfection by viruses of all three subgroups, whereas those pre-infected by ALV-E are resistant only to superinfection by other subgroup E viruses. In this study, we investigated the basis of this phenomenon by characterizing the interaction of TVB(S1) with ALV-B Env or ALV-E Env. Sequential immunoprecipitation analysis using surface envelope immunoglobulin fusion proteins revealed the existence of two separate types of TVB(S1) that are encoded by the same cDNA clone. One form, designated the type 1 receptor, is specific for ALV-B and ALV-E. The other form, the type 2 receptor, is specific for ALV-B. We show that a protein consisting of only the first and second extracellular cysteine-rich domains of TVB(S1) is capable of forming both receptor types. However, the third extracellular cysteine-rich domain is required for efficient formation of the type 1 receptor. We also demonstrate that heterogeneous N-linked glycosylation cannot explain the difference in activities of the two receptor types. The existence of two types of TVB(S1) explains the NRI pattern between ALV-B and -E: subgroup B viruses establish receptor interference with both receptor types, whereas subgroup E viruses interfere only with the type 1 receptor, leaving the type 2 receptor available to mediate subsequent rounds of ALV-B entry. The formation of a TVB receptor type that is specific for cytopathic ALV may also have important implications for understanding how some subgroups of ALV cause cell death.
Magnetite Decorated Multiwalled Carbon Nanotube Based Supercapacitor for Arsenic Removal and Desalination of Seawater (2010)

A new type of flexible carbon fabric supported magnetite multiwalled carbon nanotubes (Fe3O4-MWNTs) nanocomposite based supercapacitor was fabricated for the removal of high concentration of arsenic and desalination of seawater. MWNTs were synthesized by a chemical vapor deposition (CVD) technique, purified by air oxidation and acid treatment followed by further functionalization. Decoration of magnetite (Fe3O4) nanoparticles over functionalized MWNTs surface was done by a chemical technique. Fe3O4-MWNTs nanocomposite was characterized using different characterization techniques. Electrochemical activity of the nanocomposite was analyzed for arsenite and arsenate ions containing water as well as for seawater by using cyclic voltametry (CV). Adsorption isotherms and kinetic characteristics of sodium, arsenate, and arsenite ion removal were studied. Performance of the filter made up of nanocomposite-based electrodes was examined by an inductive coupled plasma optical emission spectroscopy (ICP-OES) technique. The present study shows the novel nature of the nanocomposite, which can remove both types of arsenic ions (arsenate and arsenite) and salt from seawater. High desalination efficiency (removal of sodium, magnesium, and calcium) of seawater and repeatability for the simultaneous removal of arsenic (both arsenate and arsenite) and sodium have been demonstrated in the present work.
Different techniques for urinary protein analysis of normal and lung cancer patients (2005)

Many components in urine are useful in clinical diagnosis and urinary proteins are known as important components to define many diseases such as proteinuria, kidney, bladder and urinary tract diseases. In this study, we focused on the comparison of different sample preparation methods for isolating urinary proteins prior to protein analysis of pooled healthy and lung cancer patient samples. Selective method was used for preliminary investigation of some putative urinary protein markers. Urine samples were passed first through a gel filtration column (PD-10 desalting column) to remove high salts and subsequently concentrated. Remaining interferences were removed by ultrafiltration or four precipitation methods. The analysis of urinary proteins by high-performance liquid chromatography and sodium dodecyl sulfate-polyacrylamide gel electrophoresis showed many similarities in profiles among preparation methods and a few profiles were different between normal and lung cancer patients. In contrast, the results of two-dimensional gel electrophoresis (2-DE) showed more distinctly different protein patterns. Our finding showed that the sequential preparation of urinary proteins by gel filtration and ultrafiltration could retain most urinary proteins which demonstrated the highest protein spots on 2-D gels and able to identify preliminary urinary protein markers related to cancer. Although sequential preparation of urine samples by gel filtration and protein precipitation resulted in low amounts of proteins on 2-D gels, high Mr proteins were easily detected. Therefore, there are alternative choices for urine sample preparation for studying the urinary proteome and identifying urinary protein markers important for further preclinical diagnostic and therapeutic applications.
New pulsatile bioreactor for fabrication of tissue‐engineered patches (2001)

To date, one approach to tissue engineering has been to develop in vitro conditions to ultimately fabricate functional cardiovascular structures prior to final implantation. In our current experiment, we developed a new pulsatile flow system that provides biochemical and biomechanical signals to regulate autologous patch-tissue development in vitro. The newly developed patch bioreactor is made of Plexiglas and is completely transparent (Mediport Kardiotechnik, Berlin). The bioreactor is connected to an air-driven respirator pump, and the cell culture medium continuously circulates through a closed-loop system. We thus developed a closed-loop, perfused bioreactor for long-term patch-tissue conditioning, which combines continuous, pulsatile perfusion and mechanical stimulation by periodically stretching the tissue-engineered patch constructs. By adjusting the stroke volume, the stroke rate, and the inspiration/expiration time of the ventilator, it allows various pulsatile flows and different levels of pressure. The whole system is a highly isolated cell culture setting, which provides a high level of sterility, gas supply, and fits into a standard humidified incubator. The bioreactor can be sterilized by ethylene oxide and assembled with a standard screwdriver. Our newly developed bioreactor provides optimal biomechanical and biodynamical stimuli for controlled tissue development and in vitro conditioning of an autologous tissue-engineered patch.
Future projections and capabilities of GMR NV memory (2002)

Sub-micron memory elements made from sandwich and multilayer GMR material have been studied experimentally and analytically. The studies show that these elements are capable of fast read and write, do not exhibit wear out, have high densities for a given lithography, require few masks, and are very compatible with CMOS technology. Analysis shows that several high performance sub-micron modes of operation are possible. Experimentally, 0.2 micron wide cells were made which exhibited a memory mode with large outputs of /spl plusmn/8%. Analysis shows that this mode is suitable for multi-megabit die with high performance if yield can be achieved.
Development of high-performance optical system for small satellites (2007)

Funded by the Ministry of Commerce, Industry, and Energy of Korea, Satrec Initiative has initiated the development of the prototype model of a TMA-based electro-optical system as part of the national space research and development program. Its optical aperture diameter is 120 mm, the effective focal length is 462 mm, and its full field-of-view is 5.08 degrees. The dimension is about 600 mm × 400 mm × 400 mm and its weight is less than 15 kg. To demonstrate its performance and versatility, multi-spectral imaging in visible and near-infrared region was chosen as the application of the prototype. In this paper, the progress made so far on the prototype development and the future plan will be presented.
3-氨基4-酰胺肟基呋咱的晶体结构 (2006)

从水和乙醇的混合溶剂中培养出了3-氨基-4-酰胺肟基呋咱（AAOF）的单晶，用四圆单晶X-射线衍射仪、IR和元素分析对其结构进行了表征。结果表明，AAOF晶体属单斜晶系，空间群P21/C。晶体学参数为：Mr=143．12，a=0．7651（3）nm，b=1．1702（3）nm，c=1．9216（10）nm，J8=96．47（4）°，V=1．7095（12）nm^3，Z=4，Da=1．668g·cm^-3，F（000）=888。AAOF分子平面性好，晶体中存在分子内和分子间氢键。
Learning long-term dependencies in NARX recurrent neural networks (1996)

It has previously been shown that gradient-descent learning algorithms for recurrent neural networks can perform poorly on tasks that involve long-term dependencies, i.e. those problems for which the desired output depends on inputs presented at times far in the past. We show that the long-term dependencies problem is lessened for a class of architectures called nonlinear autoregressive models with exogenous (NARX) recurrent neural networks, which have powerful representational capabilities. We have previously reported that gradient descent learning can be more effective in NARX networks than in recurrent neural network architectures that have "hidden states" on problems including grammatical inference and nonlinear system identification. Typically, the network converges much faster and generalizes better than other networks. The results in this paper are consistent with this phenomenon. We present some experimental results which show that NARX networks can often retain information for two to three times as long as conventional recurrent neural networks. We show that although NARX networks do not circumvent the problem of long-term dependencies, they can greatly improve performance on long-term dependency problems. We also describe in detail some of the assumptions regarding what it means to latch information robustly and suggest possible ways to loosen these assumptions.
Fabrication of metal nanoparticle arrays by controlled decomposition of polymer particles (2013)

We report a novel fabrication method for ordered arrays of metal nanoparticles that exploits the uniform arrangement of polymer beads deposited as close-packed monolayers. In contrast to colloidal lithography that applies particles as masks, we used thermal decomposition of the metal-covered particles to precisely define metal structures. Large arrays of noble metal (Au, Ag, Pt) nanoparticles were produced in a three-step process on silicon, fused silica and sapphire substrates, demonstrating the generality of this approach. Polystyrene spheres with diameters ranging between 110 nm and 1 μm were convectively assembled into crystalline monolayers, coated with metal and annealed in a resistive furnace or using an ethanol flame. The thermal decomposition of the polymer microspheres converted the metal layer into particles arranged in hexagonal arrays that preserved the order of the original monolayer. Both the particle size and the interparticle distance were adjusted via the thickness of the metal coating and the sphere diameter, respectively.
Mechanisms of T and B cell collaboration in the in vitro production of anti-DNA antibodies in the NZB/NZW F1 murine SLE model. (1987)

Abstract B/W mice spontaneously develop IgG antibodies to DNA that cause lethal immune nephritis. T and B cell interactions in the in vitro anti-DNA antibody response of B/W mice were investigated, and two distinct families of helper T cells that drive these responses were defined. First, the anti-DNA antibody-forming cell (AFC) response was found to be increased in B/W mice with nephritis and was inhibited with the monoclonal antibody anti-L3T4, suggesting a major role for helper T cells. Purified splenic T cells from mice with nephritis were able to augment both the IgG and the IgM anti-DNA AFC response of young B/W B cells. T helper cells were cloned from spleens of NZB/W F1 female mice with high titer anti-DNA antibodies and nephritis. The cloned T cells augmented both IgG and IgM anti-DNA AFC responses of young B/W B cells. Four clones--27.9, 30.7, 30.8, and 30.10--were selected for further study. These cells proliferated, in the context of syngeneic (H2d/z) antigen-presenting cells (APC) but not to allogeneic APC. Analysis of the mechanism of T helper cell clone-mediated augmentation of anti-DNA AFC revealed two populations: "cognate" T helper cells, which specifically augment anti-DNA AFC (30.7 and 30.10), and non-antigen-specific T helper cells (27.9 and 30.8), which augment the response of B cells of differing specificity by a bystander mechanism, probably through increased release of B cell growth and differentiation factors.
Electrospray Ionization Mass Spectrometric Analysis of Intact Cytochrome P450:  Identification of Tienilic Acid Adducts to P450 2C9 (1999)

A general scheme for the purification of baculovirus-expressed cytochrome P450s (P450s) from the crude insect cell pastes has been designed which renders the P450s suitable for analysis by high-performance liquid chromatography (HPLC) electrospray ionization mass spectrometry (ESI-MS). An HPLC/ESI-MS procedure has been developed to analyze small amounts of intact purified P450 (P450s cam-HT, 1A1, 1A2, 2A6, 2B1, 2C9, 2C9 C175R, 3A4, 3A4-HT) and rat NADPH cytochrome P450 reductase (P450 reductase). The experimentally determined and predicted (based on the amino acid sequences) molecular masses (MMs) of the various proteins had identical rank orders. For each individual protein, the difference between the experimentally determined (+/-SD, based on experiments performed on at least 3 different days) and predicted MMs ranged from 0.002 to 0.035%. Each experimentally determined MM had a standard deviation of less than 0.09% (based on the charge state distribution). Application of this HPLC/ESI-MS technique made the detection of the covalent modification to P450 2C9 following mechanism-based inactivation by tienilic acid possible. In the absence of glutathione, three P450 2C9 species were detected that produced ESI mass spectra corresponding to native P450 2C9 and both a monoadduct and a diadduct of tienilic acid to P450 2C9. In the presence of glutathione, only native P450 2C9 and the monoadduct were detected. Based on the observed mass shifts for the P450 2C9/tienilic acid adducts, a mechanism for the inactivation of P450 2C9 by tienilic acid is proposed.
Effect of Se Content in High-Cyanide Silver Plating Solution on {200} Crystal Plane Orientation Ratio of Electrodeposited Silver Layer (2014)

Electrodeposited silver layers obtained from high-cyanide silver plating solution are widely applied for connectors and switches of automobiles. However, few groups have discussed the relationship between the crystal structure of silver layers and their properties. In this study, the effect of the concentration of Se, added as a brightener to high-cyanide silver plating solution, was investigated by XRD and EBSD analysis for electrodeposited silver layers with {200} orientation. By optimizing the concentration of Se in the silver plating solution, the {200} orientation ratio of the silver layer was increased to as high as 94%. Since the diffusion of Cu from the Cu substrate used in this study into the silver layer was inhibited, the silver layer with the high {200} orientation ratio exhibited good electrical contact resistance of the surface of 1.3mΩ after a heating test performed at 200°C for 74h. In addition, the silver layer had good bend formability. The results of XRD analysis confirmed that the recrystallization of the electrodeposited silver layer occurred at room temperature within several hours, thus increasing the {200} orientation ratio of the silver layer.
Eyes with higher contrast look younger (2012)

The luminance and color contrast between the eyes, mouth, eyebrows, and the skin surrounding those features (‘facial contrast’) decreases with age, and faces manipulated to have increased contrast appear younger, while faces manipulated to have reduced contrast appear older (Porcheron et al. 2011 VSS). Thus there is evidence that certain kinds of contrast in the face change with age and are related to the perception of a person’s age. Here we investigated contrast between the iris and sclera, which we term ‘ocular contrast’. In particular, we investigated the relationship between ocular contrast and age, and between ocular contrast and perceived age. Using a set of carefully controlled full face color photographs of 289 women aged from 20 to 69, we measured the contrast between the iris and sclera of both eyes in the CIELab L* (light-dark), a* (red-green), and b* (yellow-blue) axes. There were significant contrast changes with age in all three channels, due primarily to the appearance of the sclera becoming darker, redder, and yellower. In a separate study, subjects estimated the age of 150 of these faces. Ocular contrast in each of the L*, a*, and b* channels was found to predict the difference between actual and perceived age of the face. Faces with higher ocular contrast in the luminance and b* channels were perceived as younger. Faces in which the sclera was less red than the iris were considered younger than those where the sclera was more red than the iris. Together these findings indicate that ocular contrast changes with age and is a cue that observers use to estimate the age of a person from their face. Meeting abstract presented at VSS 2012
Inflammation, Depression, and Slow Gait: A High Mortality Phenotype in Later Life (2015)

Comprehensive assessment of older adults is warranted for the development of treatment strategies targeting a high-mortality risk phenotype consisting of inflammation, depression, and slow gait speed.
A convenient synthetic route to methylated silacyclohexanes (1986)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTA convenient synthetic route to methylated silacyclohexanesBinh T. Nguyen and Frank K. CartledgeCite this: J. Org. Chem. 1986, 51, 12, 2206–2210Publication Date (Print):June 1, 1986Publication History Published online1 May 2002Published inissue 1 June 1986https://pubs.acs.org/doi/10.1021/jo00362a009https://doi.org/10.1021/jo00362a009research-articleACS PublicationsRequest reuse permissionsArticle Views544Altmetric-Citations24LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose Get e-Alerts