gebhart/patrepeval huggingface dataset:
Treatment of Condensate and Water Blocks in Hydraulic Fractured Shale Gas-Condensate Reservoirs (2015)

Abstract The accumulation of condensate in fractures is one of the challenges of producing gas from gas-condensate reservoirs. When the bottomhole pressure drops below the dew point, condensate forms in and around fractures and causes a significant drop in the gas relative permeability, which leads to a decline in the gas production rate. This reduction of gas productivity is in addition to the reduction due to water blocking by the fracking water. Solvents can be used to remove liquid blocks and increase gas and condensate production rates. In this paper, dimethyl ether (DME) is introduced as a novel solvent for this purpose. In addition to good partitioning into condensate/gas/aqueous phases, DME has a high vapor pressure, which improves the flow back after the treatment. We compare its behavior with both methanol and ethanol solvents.
The Question of Orientation in the Introduction of the Triphenylmethyl Radical into Solvent Substrates of Toluene, Chlorobenzene and Methyl Benzoate. The Tritylation of Aromatic Rings Containing Deactivating Groups (1956)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTThe Question of Orientation in the Introduction of the Triphenylmethyl Radical into Solvent Substrates of Toluene, Chlorobenzene and Methyl Benzoate. The Tritylation of Aromatic Rings Containing Deactivating GroupsRobert A. Benkeser and Rex B. GosnellCite this: J. Am. Chem. Soc. 1956, 78, 19, 4914–4916Publication Date (Print):October 1, 1956Publication History Published online1 May 2002Published inissue 1 October 1956https://doi.org/10.1021/ja01600a028RIGHTS & PERMISSIONSArticle Views206Altmetric-Citations8LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InReddit PDF (394 KB) Get e-Alerts Get e-Alerts
Effects of hyaluronic acid and basic fibroblast growth factor on motility of chondrocytes and synovial cells in culture (2001)

The capacity of chondrogenic precursor cells to migrate and proliferate in an injured area is considered to be essential for cartilage repair. We examined cell motility of chondrocytes and synovial cells in monolayer culture and the chemokinetic effects of hyaluronic acid (HA) and basic fibroblast growth factors (bFGF) on these cells. The velocity of chondrocyte migration was accelerated by giving bFGF and simultaneously administering of both HA and bFGF, but it was not affected by HA alone. The velocity of synovial cell migration was increased by HA, but not by bFGF. HA had a chemokinetic effect on synovial cells and bFGF had the same effect on chondrocytes. Treatment with exogenous HA and bFGF may be of value for repairing articular cartilage injury by recruiting chondrogenic cells and promoting migration of chondrocytes in the cartilage tissue.
Room-Temperature Electro-Luminescence of Type-II GaSb/GaAs Quantum Rings (2012)

The influence of Sb/background As flux ratios on GaSb nano-structures is investigated in this letter. With decreasing Sb/background As flux ratios under high Sb irradiation during the post soaking procedure, ring formation, photoluminescence (PL) intensity enhancement, and PL peak red shift are observed. With further reduced Sb flux and Sb/background As ratios, the observed more intense PL intensities of the quantum-ring (QR) samples compared with quantum dots suggest that more electron-hole wave function overlapping is obtained. The observation of room-temperature electro-luminescence of a QR PIN diode has revealed the potential of the nano-structure in light-emitting device application.
Inhibition of bovine sperm‐oocyte fusion by the carbohydrate GalNAc (1999)

The TEC-2 epitope is a carbohydrate located on the plasma membrane (oolemma) of the oocyte and appears to be involved in bovine sperm-oolemma fusion. The carbohydrates N-acetylgalactosamine (GalNAc) and galactose are part of the TEC-2 epitope and this study investigated the involvement of these carbohydrates during bovine fertilization. Gametes were exposed to the carbohydrates GalNAc, galactose, and fructose, and the lectins DBA and Con A to determine whether there was an effect on fertilization. The DBA lectin recognizes the carbohydrate GalNAc, whereas Con A recognizes the carbohydrates glucose and mannose. Oocytes pretreated with the DBA lectin prior to fertilization showed a reduction in cleavage corresponding to an increase in lectin concentrations. There was a significant increase in sperm-oolemma binding although fusion was inhibited. Oocytes exposed to GalNAc prior to sperm insemination had no effect on fertilization, however, sperm pretreatment with the carbohydrate caused inhibition of fertilization, with a reduction in cleavage rates as the GalNAc concentration increased. There was also a significant decrease in sperm-oolemma fusion and a significant increase in sperm-oolemma binding. When gametes were exposed to GalNAc at the time of fertilization a similar response to that seen with sperm pretreatment was observed. The carbohydrates galactose and fructose and the lectin Con A did not affect fertilization. In conclusion, the carbohydrate GalNAc, which is associated with the TEC-2 epitope, has a specific role during bovine sperm-oolemma fusion. This study also suggests that there is a carbohydrate-binding molecule on the sperm that binds GalNAc. Mol. Reprod. Dev. 54:179–185, 1999. © 1999 Wiley-Liss, Inc.
Using tree-grammars for training set expansion in page classi .cation (2005)

In this paper we describe a method for the expansionof training sets made by XY trees representing page layout.This approach is appropriate when dealing with page classificationbased on MXY tree page representations. The basicidea is the use of tree grammars to model the variationsin the tree which are caused by segmentation algorithms.A set of general grammatical rules are defined and used toexpand the training set. Pages are classified with a k - nnapproach where the distance between pages is computed bymeans of tree-edit distance.
The Lincoln Continuous Speech Recognition system: recent developments and results (1989)

The Lincoln stress-resistant HMM CSR has been extended to large vocabulary continuous speech for both speaker-dependent (SD) and speaker-independent (SI) tasks. Performance on the DARPA Resource Management task (991 word vocabulary, perplexity 60 word-pair grammar) [1] is 3.4% word error rate for SD training of word-context-dependent triphone models and 12.6% word error rate for SI training of (word-context-free) tied mixture triphone models.
Kallikrein 4 Is a Proliferative Factor that Is Overexpressed in Prostate Cancer (2007)

Kallikrein 4 (KLK4) is a member of the human tissue KLK family. Whereas all other KLKs are secreted proteins with extracellular functions, KLK4 is primarily localized to the nucleus, indicating that it has a different function compared with other members of the KLK family. In addition, KLK4 expression is highly enriched in the prostate and is regulated by androgens. Here, we studied the possible functional role of KLK4 in prostate cancer cells and examined its expression at the protein level in prostate cancer specimens. Consistent with its mRNA expression, KLK4 protein is significantly overexpressed in malignant prostate compared with normal prostate. KLK4 expression is predominantly in the nucleus of basal cells in the prostate epithelium in keeping with its distribution in prostate cancer cells in vitro. Furthermore, adenovirus-mediated expression of KLK4 dramatically induces proliferation of prostate cancer cells, at least in part through significant alterations in cell cycle regulatory gene expression. Consistent with these data, small interfering RNA-mediated knockdown of endogenous KLK4 in LNCaP prostate cancer cells inhibits cell growth. These data identify KLK4 as the first member of the KLK family that is a proliferative factor with effects on gene expression and indicate that it may have an important role in prostate cancer development and progression.
Candidate Genes Implicated in Type 1 Diabetes Susceptibility (2008)

Type 1 diabetes (T1D) is an autoimmune disease resulting from pancreatic beta-cells destruction, often appearing on a genetic ground susceptibility under the influence of one or more environmental factors. Multiplex families studies, using genetic markers allowed the identification of various genes, including HLA, insulin, SUMO-4 and CTLA-4 all being linked with different degrees to disease risk. The MIF gene was also suggested, although its role has yet to be established on family or twin studies. The difference in susceptibility among T1D patients suggest the development of the disease as resulting from the interaction between genetic and environmental factors. This review emphasizes the importance of identifying the genes that have a direct impact on the autoimmune process, while recalling the different strategies that are followed. The style of writing should appeal to those with strong interests in molecular biology with an equal balance of immunology and molecular epidemiology.
Abstract 3445: Targeting Thromboxane A2 receptor (TP) to block breast cancer metastasis (2012)

Abstract The thromboxane A2 (TXA2) receptor, TP, is a G-protein coupled receptor. Previous studies in our lab have shown that the TP pathway regulates tumor cell cytoskeleton and TP activation induces rapid tumor cell contractions through small GTPase RhoA activation. Conversely, TP depletion reduces the metastatic dissemination of breast cancer cells in vivo by blocking the extravasation of tumor cells. Humans express two TP isoforms, TPγ and TPα. We report here that elevated TPγ expression is associated with metastasis in patients with breast cancer. While TPγ is expressed in all breast cancer cell lines that we examined, TPγ is only expressed in malignant cell lines, indicates that TPγ plays a role in breast cancer progression. Treatment with a selective TPγ inhibitor (CAY10535) blocks TP agonist (U46619) induced cell body contraction and RhoA activation. Additionally, TPγ inhibitor reduces migratory capacity and invasiveness in human breast cancer cell lines. Our previous work has shown that active TP is required for efficient extravasation of tumor cells in vivo; in this study, we further demonstrate that mice treated with SQ29548 (a high affinity TP antagonist) prior to tumor cell injection developed fewer metastatic lesions than the mice treated with SQ29548 after tumor cell injection. In all, our study indicated that TPγ can be targeted to reduce the risk of breast cancer metastasis. Citation Format: {Authors}. {Abstract title} [abstract]. In: Proceedings of the 103rd Annual Meeting of the American Association for Cancer Research; 2012 Mar 31-Apr 4; Chicago, IL. Philadelphia (PA): AACR; Cancer Res 2012;72(8 Suppl):Abstract nr 3445. doi:1538-7445.AM2012-3445
Ligand-Exchange Dynamics on Gold Nanocrystals: Direct Monitoring of Nanoscale Polyvinylpyrrolidone–Thiol Domain Surface Morphology (2017)

We report direct high-resolution monitoring of an evolving mixed nanodomain surface morphology during thiol adsorption on polyvinylpyrrolidone (PVP)-stabilized single crystal gold nanocrystals. The thiol adsorption and replacement dynamics are much more complex than a simple complete substitution of the initial polymer ligand. We observed that during ligand exchange with linear thiol, the nanocrystal surface evolved from an initial 1 nm uniform PVP coating into a remarkably stable network of globular PVP domains 20-100 nm in size and ∼4 nm in height surrounded by thiol self-assembled monolayers. The final stability of such a mixed thiol-PVP surface morphology can possibly be attributed to the interfacial energy reduction from partially solvophilic surfaces and the entropic gain from mixed ligand surface layers. The ligand-exchange dynamics and the unusual equilibrium morphology revealed here provide important insights into both displacement dynamics of surface-bound molecules and the nanoscale peculiarities of surface functionalization of colloidal metal substrates.
The expression of major histocompatibility antigens under metallothionein gene promoter control. (1985)

A model system has been developed that provides insights into the mechanisms that control the amount of H-2 antigen on the cell surface. Hybrid genes have been constructed by using the metallothionein gene promoter to replace the H-2 gene promoter. The hybrid genes have been introduced into murine L cells and their expression has been studied. Cells containing the hybrid genes contain 20- to 60-fold more H-2 mRNA than nontransfected L cells, since the metallothionein gene promoter is much more active than the H-2 promoter. However, the total amount of H-2 antigen on the surface of the transfected L cell is similar to the amount of H-2 antigen on the normal L cell. Even after transcription from the metallothionein promoter is induced by the addition of cadmium to the cell culture medium, the amount of H-2 antigen on the surface of cells containing the hybrid genes does not increase. We conclude that the amount of H-2 antigen is controlled by events that occur after gene transcription. Evidence is presented that suggests that these post-transcriptional mechanisms may cause the expression of threefold more H-2Dd than H-2Ld on the surface of BALB/c cells. Furthermore, we suggest that the 5' untranslated portion of the H-2 mRNA is not important for directing the growing H-2 polypeptide to the cell surface.
Molecular solar thermal (MOST) energy storage and release system (2012)

A device for solar energy storage and release based on a reversible chemical reaction is demonstrated. A highly soluble derivative of a (fulvalene)diruthenium (FvRu2) system is synthesized, capable of storing solar energy (110 J g−1) in the form of chemical bonds and then releasing it “on demand”, when excited thermally or catalytically. A microfluidic device is designed and constructed for both the photo-harvesting and the heat-utilization steps, allowing for the recycling of material.
Whole and fractionated yellow pea flours reduce fasting insulin and insulin resistance in hypercholesterolaemic and overweight human subjects (2010)

The objective of the present study was to compare whole pea flour (WPF) to fractionated pea flour (FPF; hulls only) for their ability to reduce risk factors associated with CVD and diabetes in overweight hypercholesterolaemic individuals. Using a cross-over design, twenty-three hypercholesterolaemic overweight men and women received two-treatment muffins/d containing WPF, FPF or white wheat flour (WF) for 28 d, followed by 28 d washout periods. Daily doses of WPF and FPF complied with the United States Department of Agriculture's recommended level of intake of half a cup of pulses/d (approximately 50 g/d). Dietary energy requirements were calculated for each study subject, and volunteers were only permitted to eat food supplied by the study personnel. Fasting insulin, body composition, urinary enterolactone levels, postprandial glucose response, as well as fasting lipid and glucose concentrations, were assessed at the beginning and at the end of each treatment. Insulin concentrations for WPF (37·8 (SEM 3·4) pmol/ml, P = 0·021) and FPF (40·5 (SEM 3·4) pmol/ml, P = 0·037) were lower compared with WF (50·7 (SEM 3·4) pmol/ml). Insulin homeostasis modelling assessment showed that consumption of WPF and FPF decreased (P < 0·05) estimates of insulin resistance (IR) compared with WF. Android:gynoid fat ratios in women participants were lower (P = 0·027) in the WPF (1·01 (sem 0·01) group compared with the WF group (1·06 (SEM 0·01). Urinary enterolactone levels tended to be higher (P = 0·087) in WPF compared with WF. Neither treatment altered circulating fasting lipids or glucose concentrations. In conclusion, under a controlled diet paradigm, a daily consumption of whole and fractionated yellow pea flours at doses equivalent to half a cup of yellow peas/d reduced IR, while WPF reduced android adiposity in women.
Correlation of Seebeck coefficient and electric conductivity in polyaniline and polypyrrole (1998)

We have measured the Seebeck coefficient and electric conductivity in the air-stable conducting polymers polyaniline and polypyrrole at different doping levels. We find, at 300 K, the general correlation that the logarithm of the electrical conductivity varies linearly with the Seebeck coefficient on doping, but with a proportionality substantially in excess of a prediction from simple theory for a single type of mobile carrier. The correlation is unexpected in its universality and unfavorable in its consequences for thermoelectric applications. A standard model suggests that conduction by carriers of both signs may occur in these doped polymers, which thus leads to reduced thermoelectric efficiency. We also show that polyacetylene (which is not air stable), does exhibit the correlation with the expected proportionality, and, thus, its properties could be more favorable for thermoelectricity.
Calibrating Car-Following Models by Using Trajectory Data (2008)

The car-following behavior of individual drivers in real city traffic is studied on the basis of (publicly available) trajectory data sets recorded by a vehicle equipped with a radar sensor. By means of a nonlinear optimization procedure based on a genetic algorithm, the intelligent driver model and the velocity difference model are calibrated by minimizing the deviations between the observed driving dynamics and the simulated trajectory in following the same leading vehicle. The reliability and robustness of the nonlinear fits are assessed by applying different optimization criteria, that is, different measures for the deviations between two trajectories. The obtained errors are between 11% and 29%, which is consistent with typical error ranges obtained in previous studies. It is also found that the calibrated parameter values of the velocity difference model depend strongly on the optimization criterion, whereas the intelligent driver model is more robust. The influence of a reaction time is investigated by applying an explicit delay to the model input. A negligible influence of the reaction time is found and indicates that drivers compensate for their reaction time by anticipation. Furthermore, the parameter sets calibrated to a certain trajectory are applied to the other trajectories; this step allows for model validation. The results indicate that intradriver variability rather than interdriver variability accounts for a large part of the calibration errors. The results are used to suggest some criteria toward a benchmarking of car-following models.
In vivo protein interaction with the mouse M-lysozyme gene downstream enhancer correlates with demethylation and gene expression. (1996)

Differentiation of myeloid precursor cells results in transcriptional activation of the myeloid-specific murine M-lysozyme gene. M-lysozyme gene expression depends on the differentiation state of the myeloid cells and provides a marker for myeloid leukemias. The mouse lysozyme downstream enhancer (MLDE) was colocalized previously with the DNase I hypersensitive site in the chromatin of mature macrophages and shown to be macrophage differentiation-dependent. The correlation of the hypersensitive site appearance with expression of the M-lysozyme gene suggests that the enhancer becomes activated during macrophage differentiation. However, the predominant MLDE-binding protein GABP is ubiquitously expressed, indicating that additional regulatory mechanisms are required for restricting the tissue-specific activity of the enhancer. To demonstrate the specificity of the enhancer in vivo, we examined the in vivo interaction of factors with the MLDE in T cells, immature macrophage cells, and in macrophage cells. Although identical DNase I protection activity is present in extracts from all tested cell lines in vitro, the in vivo interaction of proteins is restricted to mature macrophage cells. The presence of factors capable of interacting with the enhancer is not sufficient for enhancer activity, suggesting that the process of differentiation results in factor accessibility for the MLDE. Analysis of the MLDE methylation state revealed a correlation between demethylation of the single CpG dinucleotide within the MLDE sequence and the in vivo interaction of proteins.
<title>Noninvasive temperature measurements during laser irradiation of the retina with optoacoustic techniques</title> (2002)

In all laser treatments at the fundus of the eye the temperature increase is unknown. In order to optimize the treatment modalities, a noninvasive online temperature determination is preferable. Applying laser pulses to the fundus, thermoelastic stress waves are emitted based on the thermal expansion of the heated tissue, mainly the retinal pigment epithelium (RPE). The amplitude of the thermoelastic wave is proportional to the thermal expansion coefficient, which linearly depends on temperature between 30-80 degree(s)C for water. The method was evaluated for selective RPE- treatment in vitro and clinically using the microsecond(s) -laser pulses for treatment and temperature determination simultaneously. Conventional laser photocoagulation was investigated in vitro using an Ar Ion laser for coagulation and low-energy N<SUB>2</SUB>-pumped dye laser pulses to probe the temperature. In all cases, sufficient pressure amplitudes were detected either by a needle hydrophon in vitro or by a contact lens with embedded transducer during treatment. Depending on the treatment parameter, temperature increase of 60 degree(s)C were evaluated from the pressure transients. All temperatures detected are in close agreement to heat diffusion calculations. We demonstrated a noninvasive online method to detect retinal temperatures during laser treatments. This technique can be adapted to photocoagulation, PDT and TTT.
Nature’s hierarchical materials (2007)

Many biological tissues, such as wood and bone, are fiber composites with a hierarchical structure. Their exceptional mechanical properties are believed to be due to a functional adaptation of the structure at all levels of hierarchy. This article reviews the basic principles involved in designing hierarchical biological materials, such as cellular and composite architectures, adapative growth and as well as remodeling. Some examples that are found to utilize these strategies include wood, bone, tendon, and glass sponges – all of which are discussed.
The distribution of brownian motion on linear stopping boundaries (1997)

We consider Brownian motion with drift and stopping boundaries: linear upper and lower boundaries, and possibly a vertical boundary at a truncation point, all under conditions assuring a finite stopping time. T. W. Anderson (Ann. Math. Statist. 31, 1960) derived formulas for the distributions of the stopped process along these boundaries and for the associated expected stopping times. We present simpler formulas, and briefer derivations.