gebhart/patrepeval huggingface dataset:
Association of ICP0 but not ICP27 with purified virions of herpes simplex virus type 1 (1992)

Recent studies have shown that ICP4, one of the major immediate-early proteins of herpes simplex virus type 1 is present within the tegument region of the virion (F. Yao and R. J. Courtney, J. Virol. 63:3338-3344, 1989). With monoclonal antibodies to two additional immediate-early proteins, ICP0 and ICP27, and Western blot (immunoblot) analysis, ICP0, but not ICP27, was also found to be associated with purified virus particles. In an effort to localize the ICP0 within the virion, purified virions were treated with trypsin in the presence and absence of detergent. The data suggest that ICP0 is located within the tegument region of the virion and is not localized in the envelope or within the nucleocapsid. The number of molecules of ICP0 per virion was estimated to be approximately 150.
0.6-V supply voltage references for CMOS technology based on threshold-voltage-difference architecture (2005)

A group of low-voltage power supply voltage references has been developed. The circuits are designed with the assumptions that the difference of threshold voltages is nearly constant in the wide range of temperatures, and that mobilities are tracking each other with temperature. The circuits are obtained by substitution of transistors with different thresholds in the same basic configuration that produces the output voltage proportional to the difference of transistor threshold voltages. The best result achieved in simulations shows that one can obtain the output voltage of 332 mV /spl plusmn/ 2mV in the range of temperatures 0 to 75 /spl deg/C and with variation of power supply voltage from 1.8 V down to 0.6 V.
Evaluation of in-cylinder mixture homogeneity in a diesel HCCI engine – A CFD analysis (2016)

Performance and emission characteristics of HCCI engines depend on achieving a good in-cylinder homogeneous mixture. The formation of in-cylinder mixture depends on many engine parameters, which need optimization. In addition, as of now, there is no direct way to clearly describe and estimate in-cylinder mixture homogeneity. In the CFD analysis, it is evaluated indirectly using contour plots of equivalence ratio, variation of in-cylinder pressure with crank angles, heat release curves or by the comparison of emissions. In this study, an attempt has been made to develop methods to evaluate the in-cylinder mixture homogeneity by the CFD analysis using AVL-FIRE. Here, global and local in-cylinder fuel distribution and in-cylinder fuel distribution index are used to evaluate the mixture homogeneity. In order to evaluate these methods, mixture homogeneities in two cases of fuel injections with 7- and 10-hole injector are compared. Finally, we found that the global fuel distribution (GFD) plot helps direct quantitative assessment of mixture distribution in various ER range. However, the GFD method cannot explain the spatial variation of fuel distribution and does not provide mixture homogeneity on a simple scale. In the method of plotting fuel distribution index, the overall homogeneity will be evaluated on a scale of 0 to 1 by a simple way. In the method of plotting local fuel distribution (LFD), the spatial variation of mixture homogeneity is well defined in local zones both in radial and axial directions. Further, these proposed methods help us to reduce the computation time significantly.
Safety, Immunogenicity, and Pilot Efficacy of Plasmodium falciparum Sporozoite and Asexual Blood-Stage Combination Vaccine in Swiss Adults (1995)

This study was part of a larger program to develop a vaccine effective against Plasmodium falciparum infection caused by sporozoites and clinical malaria caused by asexual blood stages. In a phase 1 study of safety and immunogenicity, two recombinant proteins (Ro 46-2717, a circumsporozoite [CS] protein) construct with a molecular mass of 35 kD, and Ro 46-2924, a merozoite surface antigen [MSA-2] construct with a molecular mass of 25 kD) adsorbed onto alum were injected in two low (20 micrograms) or two high (100 micrograms) doses in the right and left deltoid muscles of 33 healthy Swiss volunteers; six other volunteers received a placebo (alum alone). Twenty-six participants reported 51 immunization-related adverse events, mainly pain at the injection site. Mean antibody titers to CS protein and MSA-2 in an indirect immunofluorescence assay peaked four weeks after the second immunization without evidence of boosting (i.e., sharp increase in titer). By that time, 56% and 31% of the vaccinees seroconverted to CS protein and MSA-2, respectively, with the increase in MSA-2 titer being weaker than that for the CS protein. After a third immunization, five vaccinees volunteered to be challenged by three or four infective bites of Anopheles stephensi. Prepatent and incubation periods in all five were comparable with unvaccinated historic controls challenged under similar conditions, and all had symptoms of clinical falciparum malaria. We conclude that the vaccine components were safe and immunogenic but there was no evidence that this immunization regimen with the CS protein plus MSA-2 component was able to prevent infection.(ABSTRACT TRUNCATED AT 250 WORDS)
Balanced Alkaline Dry Cells (1947)

Construction and characteristics of the R.M. Cell developed for wartime service are analyzed with particular attention to those features undesirable in diverse commercial utilization. Basic cell reactions are derived and applied quantitatively to new cell structures adaptable to civilian use. Cell design of practical importance involving complete chemical balance is described in detail. Resultant cell characteristics are unusual and desirable in that a fixed ampere‐hour capacity is available over the entire load range with deactivation of the cell closely following the end of effective use.
Effect of Porosity and Concentration Polarization on Electrolyte Diffusive Transport Parameters through Ceramic Membranes with Similar Nanopore Size (2014)

Diffusive transport through nanoporous alumina membranes (NPAMs) produced by the two-step anodization method, with similar pore size but different porosity, is studied by analyzing membrane potential measured with NaCl solutions at different concentrations. Donnan exclusion of co-ions at the solution/membrane interface seem to exert a certain control on the diffusive transport of ions through NPAMs with low porosity, which might be reduced by coating the membrane surface with appropriated materials, as it is the case of SiO₂. Our results also show the effect of concentration polarization at the membrane surface on ionic transport numbers (or diffusion coefficients) for low-porosity and high electrolyte affinity membranes, which could mask values of those characteristic electrochemical parameters.
Biocompatible Polymer Vesicles from Biamphiphilic Triblock Copolymers and Their Interaction with Bovine Serum Albumin (2007)

The self-assembly of the biamphiphilic triblock copolymer poly(ethylene oxide)-b-poly(caprolactone)-b-poly(acrylic acid) into polymer vesicles is studied. The vesicles provide both biocompatibility and biodegradability. Moreover, the biamphiphilic nature of the triblock copolymer provides different surface properties in the interior and in the outer interface of the vesicles. Preparation of the aggregates by direct dissolution of the copolymer in a solution of albumin does not alter the morphology of the aggregates, and thus, they have the potential to immobilize protein molecules. Since a part of the protein is encapsulated in the interior of the vesicles, they can be used as nanocontainers. A further fraction of the protein is bound to the outer interface, which is primarily composed of the poly(acrylic acid) tails. Immobilization of protein on the outer interface can stabilize the colloidal particles and also provide them with a biofunctional component.
Practical object recognition in autonomous driving and beyond (2011)

This paper is meant as an overview of the recent object recognition work done on Stanford's autonomous vehicle and the primary challenges along this particular path. The eventual goal is to provide practical object recognition systems that will enable new robotic applications such as autonomous taxis that recognize hailing pedestrians, personal robots that can learn about specific objects in your home, and automated farming equipment that is trained on-site to recognize the plants and materials that it must interact with. Recent work has made some progress towards object recognition that could fulfill these goals, but advances in model-free segmentation and tracking algorithms are required for applicability beyond scenarios like driving in which model-free segmentation is often available. Additionally, online learning may be required to make use of the large amounts of labeled data made available by tracking-based semi-supervised learning.
Possible association between polymorphisms of human vascular endothelial growth factor A gene and susceptibility to glioma in a Chinese population (2010)

Vascular endothelial growth factor A (VEGFA), one of the most predominant mediators of pathologic angiogenesis, plays a critical role in glioma carcinogenesis and development via promoting tumor growth. We hypothesized that VEGFA polymorphisms may influence glioma risk. We recently genotyped 9 VEGFA single-nucleotide polymorphisms (SNPs) in 766 glioma patients and 824 cancer-free controls selected from a Chinese population. We evaluated the glioma risk conferred by individual SNPs, haplotypes as well as cumulative SNP effect. In the single-locus analysis, we found that rs2010963 (G+405C, G-634C) [odds ratio (OR) = 1.29; 95% confidence interval (CI) = 1.04-1.58; GC/CC vs. GG] and rs3025030 (OR = 2.21; 95% CI = 1.18-4.14; CC vs. GG/GC) were associated with increased risk for glioma, and rs3024994 (OR = 0.66; 95% CI = 0.47-0.94; CT/TT vs. CC) was associated with reduced glioma risk, albeit insignificant after Bonferroni correction for multiple comparisons. The haplotype-based analysis revealed that AGG in block 1 and ATT, ACT in block 2 were associated with 20-40% reductions in glioma risk. The inverse association of haplotype AGG containing rs2010963G remained significant after correction for multiple testing (p = 0.002, p(corrected) = 0.022). The aforementioned 3 SNPs revealed a significant cumulative risk effect; the increased risk for glioma was 1.38-fold for each additional adverse genotype he or she carries (p(trend) = 8.4 × 10(-5) ). Our findings suggested that VEGFA variants may be involved in glioma risk. Larger studies with ethnically diverse populations are warranted to confirm the results reported in this investigation.
Unhydrolyzable analogues of adenosine 3':5'-monophosphate demonstrating growth inhibition and differentiation in human cancer cells. (1992)

A set of adenosine 3':5'-monophosphate (cAMP) analogues that combine exocyclic sulfur substitutions in the equatorial (Rp) or the axial (Sp) position of the cyclophosphate ring with modifications in the adenine base of cAMP were tested for their effect on the growth of HL-60 human promyelocytic leukemia cells and LS-174T human colon carcinoma cells. Both diasteromeres of the phosphorothioate derivatives were growth inhibitory, exhibiting a concentration inhibiting 50% of cell proliferation of 3-100 microM. Among the analogues tested, Rp-8-Cl-cAMPS and Sp-8-Br-cAMPS were the two most potent. Rp-8-Cl-cAMPS was 5- to 10-fold less potent than 8-Cl-cAMP while Sp-8-Br-cAMPS was approximately 6-fold more potent than 8-Br-cAMP. The growth inhibition was not due to a block in a specific phase of the cell cycle or due to cytotoxicity. Rp-8-Cl-cAMPS enhanced its growth-inhibitory effect when added together with 8-Cl-cAMP and increased differentiation in combination with N6-benzyl-cAMP. The binding kinetics data showed that these Sp and Rp modifications brought about a greater decrease in affinity for Site B than for Site A of RI (the regulatory subunit of type I cAMP-dependent protein kinase) and a substantial decrease of affinity for Site A of RII (the regulatory subunit of type II protein kinase) but only a small decrease in affinity for Site B of RII, indicating the importance of the Site B binding of RII in the growth-inhibitory effect. These results show that the phosphorothioate analogues of cAMP are useful tools to investigate the mechanism of action of cAMP in growth control and differentiation and may have practical implication in the suppression of malignancy.
Sertoli Cell-Induced Effects on Functional and Structural Characteristics of Isolated Neonatal Porcine Islets (1996)

A lack of a sufficient number of human donor pancreases has stimulated interest in isolation and cryopreservation techniques for islets from the porcine pancreas. But because of a poorly developed outer membrane porcine islets are particularly susceptible to damage during cryopreservation. The aims of this study were twofold: 1) to develop a method for isolation and storage of islets from neonatal porcine pancreas and, 2) to examine effects of Sertoli cells on islet yield and function in Sertoli cell-islet cell cocultures. A total of 170 neonatal porcine pancreases were processed by means of a short period of digestion with collagenase and culture of the tissues at 32°C for periods up to 7 days following isolation. Results were: The mean ±SEM, number of viable islets, and percentage loss of cells following 7 days of culture were 29,442 ± 1,119 and 22.2 ± 1.2, respectively. Cryopreservation had a marked impact on recovery of viable islets: In absence of Sertoli cells an average of only 64% of islets remained viable; by contrast, when cryopreserved islets were cocultured with Sertoli cells, a mean of 82% was recovered. Glucose at 16.7 mmol/L had the capacity to elicit insulin release from 3-day-old cultured islets. The concentration in absence of Sertoli cells was 57.3 ± 3.8, uU/mL/10 islets; in the presence of Sertoli cells the level increased to a mean ± SEM of 112.8 ± 17.7, uU/mL/10 islets. Similar results were obtained following cryopreservation: glucose at 16.7 mmol/L stimulated a mean ± SEM of 27.9 ± 6.6, uU/mL/10 islets, of insulin in absence of, and 44.9 ± 9.9, uU/mL/10 islets, in presence of, Sertoli cells. Our results show that isolation and cryopreservation of neonatal porcine islets can be successfully accomplished. In addition, coculture with Sertoli cells significantly improves both the yield and functional capacity of islets following cryopreservation.
Platelet Aggregation and Cyclic Nucleotide Phosphodiesterase Activity in Arteriosclerotic Patients (1978)

Although roles of roles of cyclic AMP and cyclic GMP in platelets are though to be important on platelet aggregation, little information on their phosphodiesterase (PDE) is available. Cyclic AMP and cyclic GMP hydrolytic activities of platelets (cAMPPDE and cGMPPDE in platelets) and platelet aggregation by ADP and adrenaline were measured in 22 healthy volunteers, 26 arteriosclerotic patients and other 20 miscellaneous patients excluding vascular diseases. Activities of cAMPPDE and cGMPPDE of platelets were 2.37 +/- 0.52, 7.23 +/- 1.84 in the healthy, 2.50 +/- 0.85, 7.53 +/- 2.60 in the arteriosclerotics and 2.38 +/- 1.02, 6.98 +/- 2.59 pmol/min/10(7) platelets in the miscellaneous patients, respectively. No significant difference was observed among these three groups. Platelet aggregabilities also showed no significant difference. However, there was a significant inverse correlation between the aggregability by 1 microgram/ml of adrenaline and the PDE activities only in the arteriosclerotic patients. The correlation coefficient were-0.61 between the primary aggregation and cAMPPDE,-0.65 between the primary aggregation and cGMPPDE,-0.58 between the 5 min aggregation and cAMPPDE and -0.76 between the 5 min aggregation and cGMPPDE. The inverse correlation between platelet aggregation and cyclic nucleotide metabolism in circulating platelts of the arteriosclerotic patients may suggest that interaction of platelets with arteriosclerotiv vessel walls would produce a certain change in platelets.
Microfluidic Technology for Clinical Applications of Exosomes (2019)

Exosomes, a type of nanovesicle, are distinct cellular entities specifically capable of carrying various cargos between cells. It has been hypothesized that exosomes, as an enriched source of biomolecules, may serve as biomarkers for various diseases. This review introduces general aspects of exosomes, presents the challenges in exosome research, discusses the potential of exosomes as biomarkers, and describes the contribution of microfluidic technology to enable their isolation and analysis for diagnostic and disease monitoring. Additionally, clinical applications of exosomes for diagnostic purposes are also summarized.
Distinct Regions of the Swi5 and Ace2 Transcription Factors Are Required for Specific Gene Activation (1999)

Swi5 and Ace2 are cell cycle-regulated transcription factors that activate expression of early G(1)-specific genes in Saccharomyces cerevisiae. Swi5 and Ace2 have zinc finger DNA-binding domains that are highly conserved, and the two proteins bind to the same DNA sequences in vitro. Despite this similarity in DNA binding, Swi5 and Ace2 activate different genes in vivo, with Swi5 activating the HO gene and Ace2 activating CTS1 expression. In this report we have used chimeric fusions between Swi5 and Ace2 to determine what regions of these proteins are necessary for promoter-specific activation of HO and CTS1. We have identified specific regions of Swi5 and Ace2 that are required for activation of HO and CTS1, respectively. The Swi5 protein binds HO promoter DNA cooperatively with the Pho2 homeodomain protein, and the HO specificity region of Swi5 identified in the chimeric analysis coincides with the region of Swi5 previously identified that interacts with Pho2 in vitro. Swi5 and Ace2 also activate expression of a number of other genes expressed in G(1) phase of the cell cycle, including ASH1, CDC6, EGT2, PCL2, PCL9, RME1, and SIC1. Analysis of the Swi5/Ace2 chimeras shows that distinct regions of Swi5 and Ace2 contribute to the transcriptional activation of some of these other G(1)-regulated genes.
Towards frequency reuse 1 cellular FDM/TDM systems (2006)

Classical FDM/TDM cellular networks, such as GSM, avoid the reuse of the same set of frequencies in close-by cells. This is necessary in order to keep the interference level in the cells below a certain threshold. As a drawback, each cell only uses a fraction of the total frequency resources. Eventually, it would be desirable to fully utilize the complete available frequency spectrum in each cell. In this paper, we demonstrate how beamforming antennas in combination with an intelligent interference coordination in-between cells can be used to achieve this goal. We investigate the tradeoff between the achievable Signal-to-Interference Ratio (SIR) in each cell and the effective utilization of the frequency resources at the example of a state-of-the-art 802.16e system. We conclude that the investigated mechanisms open the way to future wireless access networks with an efficient utilization of the available frequency spectrum.
An Atomically Layered InSe Avalanche Photodetector (2015)

Atomically thin photodetectors based on 2D materials have attracted great interest due to their potential as highly energy-efficient integrated devices. However, photoinduced carrier generation in these media is relatively poor due to low optical absorption, limiting device performance. Current methods for overcoming this problem, such as reducing contact resistances or back gating, tend to increase dark current and suffer slow response times. Here, we realize the avalanche effect in a 2D material-based photodetector and show that avalanche multiplication can greatly enhance the device response of an ultrathin InSe-based photodetector. This is achieved by exploiting the large Schottky barrier formed between InSe and Al electrodes, enabling the application of a large bias voltage. Plasmonic enhancement of the photosensitivity, achieved by patterning arrays of Al nanodisks onto the InSe layer, further improves device efficiency. With an external quantum efficiency approaching 866%, a dark current in the picoamp range, and a fast response time of 87 μs, this atomic layer device exhibits multiple significant advances in overall performance for this class of devices.
Reproductive depression (2012)

Reproductive depression is the depression in women that is related to the hormonal changes of the menstrual cycle, pregnancy and the menopause and is manifested clinically as premenstrual depression, postnatal depression and climacteric depression. These three components occur in the same vulnerable women in that a woman with depression in the menopausal transition will usually have a history of premenstrual syndrome (PMS; premenstrual dysphoric disorder [PMDD]), would have been in a good mood during pregnancy and then develop postnatal depression. When the periods return the depression becomes cyclical as PMS. These three conditions are effectively treated with transdermal estrogens which should be the first-choice therapy rather than antidepressants. Estrogens can be used together with antidepressants. The critical time to prevent long-term mood problems is the correct treatment of postnatal depression. In women with low energy and libido, often a side effect of antidepressants, the addition of transdermal testosterone is useful. These women with reproductive depression are often progesterone/progestogen intolerant and a smaller dose or duration of progestogen is a necessary compromise. Alternatively a Mirena IUS or rarely a hysterectomy is required.
Evaluation of Cytotoxic Effects of Different Concentrations of Porous Hollow Au Nanoparticles (PHAuNPs) on Cells (2014)

Nanoparticles (NPs) have been introduced as a suitable alternative in many in vivo bioapplications. The risks of utilizing nanoparticles continue to be an ongoing research. Furthermore, the various chemicals used in their synthesis influence the cytotoxic effects of nanoparticles. We have investigated the cytotoxicity of Porous Hollow Au Nanoparticles (PHAuNPs) on cancer cell lines PC-3, PC-3ML, and MDA-MB-231 and the normal cell line PNT1A. Cell proliferation for the different cells in the presence of different concentrations of the PHAuNPs was assessed after 24 hours and 72 hours of incubation using MTT assay. The study also included the cytotoxic evaluation of pegylated PHAuNPs. Identical cell seeding densities, particle concentrations, and incubation times were employed for these two types of Au nanoparticles. Our results indicated that (1) impact on cell proliferation was concentration dependent and was different for the different cell types without cellular necrosis and (b) cellular proliferation might be impacted more based on the cell line.
Oligophenylenevinylene-Functionalized Ru(II)-bipyridine Sensitizers for Efficient Dye-Sensitized Nanocrystalline TiO<sub>2</sub> Solar Cells (2006)

New 4- and 4,4‘-oligophenylenevinylene-functionalized Ru(II)-bipyridine sensitizers were synthesized and used in dye-sensitized TiO2 solar cells (DSSCs) to study their sensitizing properties relative to those of the usual N3 dye. Among those studied, two sensitizers, denoted as D5 and D6, have rendered considerably higher photocurrents and efficiencies for their cells, compared to those of a cell using the conventional N3 dye. The short-circuit photocurrent densities for N3, D5, and D6 are 9.8, 10.8, and 11.7 mA/cm2, and the efficiencies are 4.1, 4.6, and 4.8%, respectively. The enhanced photocurrents are correlated with the increased molar absorption coefficients of the D5 and D6 dyes over the entire visible spectra region, relative to those of the N3 dye. Corresponding enhancements in IPCE values are attributed to the oligophenylenevinylene groups of D5 and D6 that consist of conjugated double bonds. Analysis of the absorption spectra of the sensitizer-coated TiO2 films and the desorbed dyes in an aqueous KOH solution indicates that D5 and D6 adhere more strongly to TiO2 particles than the N3 dye, which is beneficial from the viewpoint of the long-term stability of the DSSCs.