gebhart/patrepeval huggingface dataset:
Relationship between atorvastatin dose and the harm caused by torcetrapib (2012)

Development of the cholesteryl ester transfer protein (CETP) inhibitor, torcetrapib, was halted after the ILLUMINATE trial revealed an increase in both all-cause mortality (ACM) and major cardiovascular events (MCVEs) associated with its use. We now report that the harm caused by torcetrapib was confined to those in the 10 mg atorvastatin subgroup for both ACM [hazard ratio (HR) = 2.68, 95% CI (1.58, 4.54), P < 0.0001] and MCVEs [HR = 1.41, 95% CI (1.14, 1.74), P = 0.002], with no evidence of harm when torcetrapib was coadministered with higher doses of atorvastatin. In the atorvastatin 10 mg subgroup, age, prior heart failure and stroke were significantly associated with ACM, independent of torcetrapib treatment, whereas low apoA-I, smoking, hypertension, heart failure, myocardial infarction, and stroke were independently associated with MCVEs. After adjusting for these factors, the HR associated with torcetrapib treatment in the 10 mg atorvastatin subgroup remained elevated for both ACM [HR = 2.67, 95% CI (1.57, 4.54), P < 0.001] and MCVE [HR = 1.36, 95% CI (1.10, 1.69), P = 0.005]. Thus, the harm caused by torcetrapib was confined to individuals taking atorvastatin 10 mg. The harm could not be explained by torcetrapib-induced changes in lipid levels, blood pressure, or electrolytes. It is conceivable that higher doses of atorvastatin protected against the harm caused by torcetrapib.
Nanosecond colloidal quantum dot lasers for sensing (2014)

Low-threshold, gain switched colloidal quantum dot (CQD) distributed-feedback lasers operating in the nanosecond regime are reported and proposed for sensing applications for the first time to the authors' knowledge. The lasers are based on a mechanically-flexible polymeric, second order grating structure overcoated with a thin-film of CQD/PMMA composite. The threshold fluence of the resulting lasers is as low as 0.5 mJ/cm² for a 610 nm emission and the typical linewidth is below 0.3 nm. The emission wavelength of the lasers can be set at the design stage and laser operation between 605 nm and 616 nm, while using the exact same CQD gain material, is shown. In addition, the potential of such CQD lasers for refractive index sensing in solution is demonstrated by immersion in water.
A floating-gate DAC array (2004)

The precision of digital-to-analog converters (DAC) is always limited by element mismatching. These elements can be transistors, resistors, capacitors, etc. Techniques used to improve resolution often involve the sacrifice of die area. In this paper we present a design for a DAC using floating-gate MOS transistors. This approach takes the classical scaled transistor DAC techniques, where we scale our transistors by programming each transistor's floating-gate charge instead of W/L ratios. The programming eliminates device mismatch issues on DAC performance, and greatly reduces it size. A floating-gate digital-to-analog converter (FGDAC) that just occupies 37.25/spl mu/m by 18.5/spl mu/m area, was fabricated using 0.6/spl mu/m CMOS technology. Because of its small size, an array of FGDACs can be built in a single IC; a 4/spl times/4 10 bit FGDAC has been fabricated using 0.6/spl mu/m CMOS technology. Measurements show that we can obtain 7 bits of accuracy with less than 0.5LSB linearity error for a single FGDAC.
Photoplethysmography-Based Heart Rate Monitoring in Physical Activities via Joint Sparse Spectrum Reconstruction (2015)

These results show that the method has great potential to be used for PPG-based heart rate monitoring in wearable devices for fitness tracking and health monitoring.
Na/K-ATPase Y260 Phosphorylation–mediated Src Regulation in Control of Aerobic Glycolysis and Tumor Growth (2018)

We report here the identification of α1 Na/K-ATPase as a major regulator of the proto-oncogene Src kinase and the role of this regulation in control of Warburg effect and tumor growth. Specifically, we discovered Y260 in α1 Na/K-ATPase as a Src-specific phosphorylation and binding site and that Y260 phosphorylation is required for Src-mediated signal transduction in response to a number of stimuli including EGF. As such, it enables a dynamic control of aerobic glycolysis. However, such regulation appears to be lost or attenuated in human cancers as the expression of Na/K-ATPase α1 was significantly decreased in prostate, breast and kidney cancers, and further reduced in corresponding metastatic lesions in patient samples. Consistently, knockdown of α1 Na/K-ATPase led to a further increase in lactate production and the growth of tumor xenograft. These findings suggest that α1 Na/K-ATPase works as a tumor suppressor and that a loss of Na/K-ATPase-mediated Src regulation may lead to Warburg phenotype in cancer.
Development of a Ratiometric Fluorescent Zinc Ion Probe in Near-Infrared Region, Based on Tricarbocyanine Chromophore (2006)

Novel ratiometric fluorescent probes for Zn2+ in the near-infrared region, based on a tricarbocyanine chromophore, have been designed, synthesized, and evaluated. Upon addition of Zn2+, a 44 nm red shift of the absorption maximum was observed, which indicates that this probe could work as a ratiometric probe for Zn2+. This change is due to the difference in the electron-donating ability of the amine substituent before and after reaction with Zn2+. This fluorescence modulation of amine-substituted tricarbocyanines should be applicable to dual-wavelength measurement of various biomolecules or enzyme activities.
Assessment of Corneal Fluorescein Staining in Different Dry Eye Subtypes Using Digital Image Analysis (2019)

The digital image analysis technique may be a reliable alternative to evaluate corneal staining objectively in the clinic and in clinical trials.
Large-Scale Nucleotide Optimization of Simian Immunodeficiency Virus Reduces Its Capacity To Stimulate Type I Interferon <i>In Vitro</i> (2014)

In this study, we synthesized artificial SIV genomes in which the most hyperbiased sequences were optimized to bring them closer to the nucleotide composition of the macaque SIV host. Interestingly, we generated a stable synthetic SIV optimized with 70 synonymous mutations in pol gene, which had a normal replicative capacity but a reduced ability to stimulate type I IFN. This demonstrates the possibility to rationally change viral nucleotide composition to design replicative and genetically stable lentiviruses with attenuated pathogenic potentials.
Sub-50 nm gate length n-MOSFETs with 10 nm phosphorus source and drain junctions (2002)

Forty-nanometer gate length n-MOSFETs with ultra-shallow source and drain junctions of around 10 nm are fabricated for the first time. To achieve such shallow junctions, a technique of solid-phase diffusion (SPD) from phosphorous-doped silicated glass (PSG) gate sidewalls is used. The resulting 40 nm gate length n-MOSFETs operate quite normally at room temperature. Even in the sub-50 nm region, short-channel effects-V/sub th/ shift and S-factor degradation-are suppressed very well. The impact ionization rate falls significantly as Vd falls below 1.5 V. It is found that, in the case of Vd less than 1.5 V, hot-carrier degradation is not a serious problem even in the sub-50 nm region.< <ETX xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">></ETX>
Genetic parameters for carcass traits and their live animal indicators in Simmental cattle1 (2003)

The objective of this study was to estimate parameters required for genetic evaluation of Simmental carcass merit using carcass and live animal data. Carcass weight, fat thickness, longissimus muscle area, and marbling score were available from 5,750 steers and 1,504 heifers sired by Simmental bulls. Additionally, yearling ultrasound measurements of fat thickness, longissimus muscle area, and estimated percentage of intramuscular fat were available on Simmental bulls (n = 3,409) and heifers (n = 1,503). An extended pedigree was used to construct the relationship matrix (n = 23,968) linking bulls and heifers with ultrasound data to steers and heifers with carcass data. All data were obtained from the American Simmental Association. No animal had both ultrasound and carcass data. Using an animal model and treating corresponding ultrasound and carcass traits separately, genetic parameters were estimated using restricted maximum likelihood. Heritability estimates for carcass traits were 0.48 +/- 0.06, 0.35 +/- 0.05, 0.46 +/- 0.05, and 0.54 +/- 0.05 for carcass weight, fat thickness, longissimus muscle area, and marbling score, respectively. Heritability estimates for bull (heifer) ultrasound traits were 0.53 +/- 0.07 (0.69 +/- 0.09), 0.37 +/- 0.06 (0.51 +/- 0.09), and 0.47 +/- 0.06 (0.52 +/- 0.09) for fat thickness, longissimus muscle area, and intramuscular fat percentage, respectively. Heritability of weight at scan was 0.47 +/- 0.05. Using a bivariate weight model including scan weight of bulls and heifers with carcass weight of slaughter animals, a genetic correlation of 0.77 +/- 0.10 was obtained. Models for fat thickness, longissimus muscle area, and marbling score were each trivariate, including ultrasound measurements on yearling bulls and heifers, and corresponding carcass traits of slaughter animals. Genetic correlations of carcass fat thickness with bull and heifer ultrasound fat were 0.79 +/- 0.13 and 0.83 +/- 0.12, respectively. Genetic correlations of carcass longissimus muscle area with bull and heifer ultrasound longissimus muscle area were 0.80 +/- 0.11 and 0.54 +/- 0.12, respectively. Genetic correlations of carcass marbling score with bull and heifer ultrasound intramuscular fat percentage were 0.74 +/- 0.11 and 0.69 +/- 0.13, respectively. These results provide the parameter estimates necessary for genetic evaluation of Simmental carcass merit using both data from steer and heifer carcasses, and their ultrasound indicators on yearling bulls and heifers.
A Fully Integrated Microneedle-based Transdermal Drug Delivery System (2007)

Patch-based transdermal drug delivery offers a convenient way to administer drugs without the drawbacks of standard hypodermic injections relating to issues such as patient acceptability and injection safety. However, conventional transdermal drug delivery is limited to therapeutics where the drug can diffuse across the skin barrier. By using miniaturized needles, a pathway into the human body can be established which allow transport of macromolecular drugs such as insulins or vaccines. These microneedles only penetrate the outermost skin layers, superficial enough not to reach the nerve receptors of the lower skin. Thus, microneedle insertions are perceived as painless. The thesis presents research in the field of microneedle-based drug delivery with the specific aim of investigating a microneedle-based transdermal patch concept. To enable controllable drug infusion and still maintain an unobtrusive and easy-to-use, patch-like design, the system includes a small active dispenser mechanism. The dispenser is based on a novel thermal actuator consisting of highly expandable microspheres. When actuated, the microspheres expand into a liquid reservoir and, subsequently, dispense stored liquid through outlet holes. The microneedles are fabricated in monocrystalline silicon by Deep Reactive Ion Etching. The needles are organized in arrays situated on a chip. To allow active delivery, the microneedles are hollow with the needle bore-opening located on the side of the needle. This way, the needle can have a sharp and well-defined needle tip. A sharp needle is a further requirement to achieve microneedle insertion into skin by hand. The thesis presents fabrication and evaluation of both the microneedle structure and the transdermal patch as such. Issues such as penetration reliability, liquid delivery into the skin and microneedle packaging are discussed. The microneedle patch was also tested and studied in vivo for insulin delivery. Results show that intradermal administration with microneedles give rise to similar insulin concentration as standard subcutaneous delivery with the same dose rate.
Acoustic and spectral characteristics of young children’s fricative productions: A developmental perspective (2005)

Scientists have made great strides toward understanding the mechanisms of speech production and perception. However, the complex relationships between the acoustic structures of speech and the resulting psychological percepts have yet to be fully and adequately explained, especially in speech produced by younger children. Thus, this study examined the acoustic structure of voiceless fricatives (/f, theta, s, S/) produced by adults and typically developing children from 3 to 6 years of age in terms of multiple acoustic parameters (durations, normalized amplitude, spectral slope, and spectral moments). It was found that the acoustic parameters of spectral slope and variance (commonly excluded from previous studies of child speech) were important acoustic parameters in the differentiation and classification of the voiceless fricatives, with spectral variance being the only measure to separate all four places of articulation. It was further shown that the sibilant contrast between /s/ and /S/ was less distinguished in children than adults, characterized by a dramatic change in several spectral parameters at approximately five years of age. Discriminant analysis revealed evidence that classification models based on adult data were sensitive to these spectral differences in the five-year-old age group.
Architecture of the Symbolics 3600 (1985)

article Free Access Share on Architecture of the Symbolics 3600 Author: David A. Moon Symbolics, Inc. Symbolics, Inc.View Profile Authors Info & Claims ACM SIGARCH Computer Architecture NewsVolume 13Issue 3June 1985 pp 76–83https://doi.org/10.1145/327070.327133Published:01 June 1985Publication History 72citation1,174DownloadsMetricsTotal Citations72Total Downloads1,174Last 12 Months148Last 6 weeks17 Get Citation AlertsNew Citation Alert added!This alert has been successfully added and will be sent to:You will be notified whenever a record that you have chosen has been cited.To manage your alert preferences, click on the button below.Manage my AlertsNew Citation Alert!Please log in to your account Save to BinderSave to BinderCreate a New BinderNameCancelCreateExport CitationPublisher SiteeReaderPDF
The Effect of Time, Roasting Temperature, and Grind Size on Caffeine and Chlorogenic Acid Concentrations in Cold Brew Coffee (2017)

The extraction kinetics and equilibrium concentrations of caffeine and 3-chlorogenic acid (3-CGA) in cold brew coffee were investigated by brewing four coffee samples (dark roast/medium grind, dark roast/coarse grind, medium roast/medium grind, medium roast/coarse grind) using cold and hot methods. 3-CGA and caffeine were found at higher concentrations in cold brew coffee made with medium roast coffees, rather than dark roast. The grind size did not impact 3-CGA and caffeine concentrations of cold brew samples significantly, indicating that the rate determining step in extraction for these compounds did not depend on surface area. Caffeine concentrations in cold brew coarse grind samples were substantially higher than their hot brew counterparts. 3-CGA concentrations and pH were comparable between cold and hot brews. This work suggests that the difference in acidity of cold brew coffee is likely not due to 3-CGA or caffeine concentrations considering that most acids in coffee are highly soluble and extract quickly. It was determined that caffeine and 3-CGA concentrations reached equilibrium according to first order kinetics between 6 and 7 hours in all cold brew samples instead of 10 to 24 hours outlined in typical cold brew methods.
A Fiber Based Interferometer with Discrete Tunable Laser for Fourier Domain Optical Coherence Tomography (2006)

We demonstrate a fiber interferometer with a discrete tunable laser source, which has the feasibility to be utilized in Fourier domain optical coherence tomography (FD-OCT). The structure of the experimental system, its operation principle and theoretical analysis are presented, showing that sampled grating distributed Bragg reflector (SG-DBR) lasers have the potentiality to be adopted as light source in FD-OCT.
A new method for introducing iodo and bromo fluorides into organic molecules using elemental fluorine (1985)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTA new method for introducing iodo and bromo fluorides into organic molecules using elemental fluorineShlomo Rozen and Michael BrandCite this: J. Org. Chem. 1985, 50, 18, 3342–3348Publication Date (Print):September 1, 1985Publication History Published online1 May 2002Published inissue 1 September 1985https://pubs.acs.org/doi/10.1021/jo00218a020https://doi.org/10.1021/jo00218a020research-articleACS PublicationsRequest reuse permissionsArticle Views746Altmetric-Citations67LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose Get e-Alerts
Efficient Nonsacrificial Water Splitting through Two-Step Photoexcitation by Visible Light using a Modified Oxynitride as a Hydrogen Evolution Photocatalyst (2010)

A two-step photocatalytic water splitting (Z-scheme) system consisting of a modified ZrO(2)/TaON species (H(2) evolution photocatalyst), an O(2) evolution photocatalyst, and a reversible donor/acceptor pair (i.e., redox mediator) was investigated. Among the O(2) evolution photocatalysts and redox mediators examined, Pt-loaded WO(3) (Pt/WO(3)) and the IO(3)(-)/I(-) pair were respectively found to be the most active components. Combining these two components with Pt-loaded ZrO(2)/TaON achieved stoichiometric water splitting into H(2) and O(2) under visible light, achieving an apparent quantum yield of 6.3% under irradiation by 420.5 nm monochromatic light under optimal conditions, 6 times greater than the yield achieved using a TaON analogue. To the best of our knowledge, this is the highest reported value to date for a nonsacrificial visible-light-driven water splitting system. The high activity of this system is due to the efficient reaction of electron donors (I(-) ions) and acceptors (IO(3)(-) ions) on the Pt/ZrO(2)/TaON and Pt/WO(3) photocatalysts, respectively, which suppresses undesirable reverse reactions involving the redox couple that would otherwise occur on the photocatalysts. Photoluminescence and photoelectrochemical measurements indicated that the high activity of this Z-scheme system results from the moderated n-type semiconducting character of ZrO(2)/TaON, which results in a lower probability of undesirable electron-hole recombination in ZrO(2)/TaON than in TaON.
Peroxisome Proliferator-Activated Receptor   Coactivator 1 in Caloric Restriction and Other Models of Longevity (2005)

Dietary restriction of calories (caloric restriction [CR]) increases longevity in phylogenetically diverse species. CR retards or prevents age-dependent deterioration of tissues and an array of spontaneous and chemically induced diseases associated with obesity including cardiovascular disease, diabetes, and cancer. An understanding of the molecular mechanisms that underlie the beneficial effects of CR will help identify novel dietary, pharmacological, and lifestyle strategies for slowing the rate of aging and preventing these diseases as well as identify factors which modulate chemical toxicity. Here, we review the involvement of transcriptional coactivator proteins, peroxisome proliferator-activated receptor (PPAR) gamma coactivator 1 (PGC-1) alpha and beta, and regulated nuclear receptors (NR) in mediating the phenotypic changes found in models of longevity which include rodent CR models and mouse mutants in which insulin and/or insulin-like growth factor-I signaling is attenuated. PGC-1alpha is transcriptionally or posttranslationally regulated in mammals by: 1) forkhead box "other" (FoxO) transcription factors through an insulin/insulin-like growth factor-I -dependent pathway, 2) glucagon-stimulated cellular AMP (cAMP) response element binding protein, 3) stress-activated kinase signaling through p38 mitogen-activated protein kinase, and 4) the deacetylase and longevity factor sirtuin 1 (SIRT1). PGC-1alpha and PGC-1beta regulate the ligand-dependent and -independent activation of a large number of NR including PPARalpha and constitutive activated receptor (CAR). These NR regulate genes involved in nutrient and xenobiotic transport and metabolism as well as resistance to stress. CR reverses age-dependent decreases in PGC-1alpha, PPARalpha, and regulated genes. Strategies that target one or multiple PGC-1-regulated NR could be used to mimic the beneficial health effects found in models of longevity.
The Transmembrane Adaptor Protein Trim Regulates T Cell Receptor (Tcr) Expression and Tcr-Mediated Signaling via an Association with the Tcr ζ Chain (2001)

T cell receptor (TCR)-interacting molecule (TRIM) is a recently identified transmembrane adaptor protein, which is exclusively expressed in T cells. Here we demonstrate that in mature T cells, TRIM preferentially interacts with the TCR via the TCR-zeta chains and to a lesser extent via the CD3-straightepsilon/gamma heterodimer. Transient or stable overexpression of TRIM in Jurkat T cells results in enhancement of TCR expression on the cell surface and elevated induction of Ca(2+) mobilization after T cell activation. TRIM-mediated upregulation of TCR expression results from inhibition of spontaneous TCR internalization and stabilization of TCR complexes on the cell surface. Collectively, our data identify TRIM as a novel integral component of the TCR complex and suggest that one function of TRIM might be to modulate the strength of signals transduced through the TCR through regulation of TCR expression on the cell surface.
Lamb wave frequency–wavenumber analysis and decomposition (2014)

Lamb waves have shown great potentials in damage detection of thin-walled structures due to their long propagation capability and sensitivity to a variety of damage types. However, their practical adoption has been hindered due to the complexity caused by their multimodal nature. Various wave modes that propagate at various velocities in the structure make the interpretation of Lamb wave signals very difficult. It is desired that the modes can be separated for independent analysis or further employment. In this article, we present our studies on the multimodal Lamb wave propagation and wave mode decomposition using frequency–wavenumber analysis. Wave representation in the frequency–wavenumber domain is obtained using multidimensional Fourier transform, where various Lamb wave modes can be easily discerned. This allows for separating them or extracting a desired wave mode through a filtering process, thus making it possible to use a single-mode Lamb wave for the detection of a certain type of damage in structural health monitoring applications. To retain the temporal and spatial information that is lost during Fourier transformation, a novel wavenumber analysis is also presented. These concepts are illustrated through experimental testing where high spatial resolution wavefields are measured by a scanning laser Doppler vibrometer.