gebhart/patrepeval huggingface dataset:
Spring-Mediated Mandibular Distraction Osteogenesis (2003)

Successful performance of distraction osteogenesis requires rigorous patient compliance with a daily activation regimen of a percutaneous screw. Previous clinical studies have found that failure of patient compliance with this regimen is the most common complication leading to technical failure of the distraction process. The authors have developed an internalized spring-mediated device for mandibular distraction osteogenesis that can potentially abrogate the risks associated with patient compliance by allowing for automated distraction across an osteotomy. Twenty adult New Zealand White rabbits underwent unilateral mandibular osteotomy. A segment of nickel-titanium shape memory alloy reinforced at both ends with a pinball was fashioned into an inferiorly based arc and secured to the mandible with stainless steel wire. On postoperative day 12, spring activation commenced by cutting a wire binding the two pinballs to one another. Animals were observed for 6 weeks before they were killed. Radiographic studies and decalcified histologic analysis were performed on extracted mandibles. Temperature- and displacement-dependent properties of the shape memory alloy were also examined. Five animals were excluded from the study due to infection, nonunion, or device failure. A mean distraction of 1.2 mm in the distracted hemimandible relative to the nonoperated hemimandible was found (P <.001, two-tailed paired t test). The maximum distraction achieved in an experimental specimen using the spring distractor was 3.7 mm. There were no other histologic or radiographic differences found between study specimens and specimens subjected to traditional distraction methods. Biomechanical testing of the shape memory alloy revealed a temperature-dependent increase in force at body temperature compared with room temperature and a reduction in force with increased displacement of the spring. This study demonstrates the feasibility of spring-mediated distraction osteogenesis across an osteotomy. As the field of distraction osteogenesis matures, the next level of sophistication in the clinical development of devices will incorporate technology that permits fully internalized and automated distraction to occur.
Sucrose Synthase, a Cytosolic Enzyme in Protoplasts of Jerusalem Artichoke Tubers (<i>Helianthus tuberosus</i> L.) (1988)

The exact subcellular location of sucrose synthase (UDP-d-glucose: d-fructose 2-alpha-d-glucosyltransferase, EC 2.4.1.13) in Helianthus tuberosus tubers was studied by comparison of its activity in protoplasts with that of vacuoles isolated from them. Assuming 100% of the beta-N-acetylglucosaminidase activity to be of vacuolar origin, less than 5% of both the sucrose synthase activity and the extravacuolar marker NAD-malate dehydrogenase was detected in the vacuole preparations. Sucrose synthase is therefore an extravacuolar enzyme. Its role in the inulin metabolism of H. tuberosus is discussed.
[Effect of urinary trypsin inhibitor on DNA genotyping in urine samples]. (2010)

Detection rate of STR loci in urinary samples preserved with UTI was increased significantly, which results in prolonging the storage periods of urinary samples for personal identification.
The Transcalifornium Elements (1958)

During the past sixty years, four elements beyond californium on the atomic number scale have been synthesized by the transmutation of lighter elements. The first preparation of einsteinium and fermium occurred in a thermonuclear explosion. Mendelevium and element 102, however, were prepared by a more conventional method, that of charged particle bombardment of elements of high atomic number.
Run-length reduction of 3PM code via look-ahead technique (1982)

The binary 3PM code has at least two ZEROS between transitions, and thus has an increase in density ratio over MFM. While the original 3PM had at most 11 ZEROS between transitions, this number has been reduced to 7 by look-ahead techniques, whereby the present code word can be a function of input bits yet to come. The ability to "see into the future" enables look-ahead codes to achieve rates close to capacity with simple logic: so long as m/n≤capacity, it is possible to achieve an m-into-n code with an m and n relatively prime. Encoding is done one word at a time by observing the contents of the present code word, the previous code word, and the look-ahead region 4 bits wide, and substituting patterns not used in the basic encoding. Changes are made only in the present word and its preceding bit. Decoding is done likewise, with an observation field of 14 positions.
An improved tuning technique for switched capacitor filters (2002)

A new technique is described for tuning SC circuits that provides wide-ranging, continuous tuning of any circuit parameter that is determined by a capacitor ratio. The technique employs voltage scaling circuits to modify effective capacitor ratios. Although based on the master-slave control principle, these strategies are considerably more economical than other widely used master-slave tuning methods as they do not require duplication of a substantial part of the main filter.< <ETX xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">></ETX>
Synthesis of novel benzils and benzoins as selective inhibitors of mammalian carboxylesterases designed to ameliorate the delayed diarrhea associated with CPT-11 treatment. (2006)

Proc Amer Assoc Cancer Res, Volume 47, 2006

5530 

The anticancer prodrug CPT-11 is activated by carboxylesterases (CE) to yield SN-38, a potent topoisomerase I poison. Delayed diarrhea, which is the dose limiting toxicity for this drug, is thought to arise from direct conversion of the drug to the active metabolite in the small intestine. Therefore, we have screened for, and identified, a series of selective CE inhibitors that may have utility in ameliorating diarrhea. Benzil has been identified as a potent inhibitor of these enzymes. The essential characteristics required for inhibitory activity by the benzil and its analogs include: (i) the dione moiety, (ii) the aromatic rings; and (iii) substitution on the rings which does not impede access of inhibitor to the enzyme active site. Halogen substitution has been shown to increase the Ki values for these small compounds toward three mammalian CEs, human intestinal CE (hiCE), rabbit CE (rCE), and human liver CE (hCE1). We have synthesized and assessed the ability of symmetrical benzils and their related benzoins with different degrees of fluorine substitution in the o-, m-, or p- position of the aromatic ring, to inhibit these enzymes. Following determination of the Ki values for CE enzyme inhibition with these fluorobenzil analogs, a variety of computational molecular modeling methods have been applied in an attempt to correlate these results with physical parameters of these compounds. These include the assessment of the atomic charge on both the oxygen and carbon atoms of the carbonyl group and the pka of the hydroxyl group of the benzoins. In addition, molecular modeling of the movement of the aromatic rings around the 1,2-dione dihedral angle of the benzil and the pseudo-dione dihedral angle of the benzoin indicated that the ability for these molecules to inhibit CEs was due, partially, to rotational restrictions enforced by this dihedral angle. Hence these studies may prove useful as a predictive tool to assess the potency of fluorinated benzils and benzoins as potent inhibitors of mammalian CEs. We envisage that these compounds could be used to inhibit hiCE in vivo, preventing the conversion of CPT-11 to SN-38 in the gut, therefore reducing the side effect, diarrhea, associated with drug treatment. This work was funded by the American Lebanese Syrian Associated Charities.
Cranberry Juice Induces Nitric Oxide-Dependent Vasodilation <i>In Vitro</i> and Its Infusion Transiently Reduces Blood Pressure in Anesthetized Rats (2000)

ABSTRACT Red wine vasodilates rat aortae, an effect attributed to polyphenolic compounds. Cranberry juice (CBJ) is also rich in polyphenols. We determined that CBJ has vasorelaxing properties similar to those of red wine. Rat aortic rings cleaned in Krebs buffer, pH 7.4, bubbled with 95% O(2) and 5% CO(2) were recovered for 30 minutes at 37 degrees C under 2.0 g tension. After phenylephrine (PE, 100 mumol/L) contraction, acetylcholine (3 mumol/L)-induced relaxation of intact vessel was significantly higher than in denuded vessels (59.1 +/- 0.27% versus 10.1 +/- 0.09% of the maximal PE contraction; P <.003). After a second PE contraction, a 1:100 dilution of CBJ was added. Intact rings were vasodilated by CBJ with 56.7 +/- 0.26% relaxation, compared to denuded rings with 8.9 +/- 0.06% relaxation (P <.002). Addition of L-NAME reversed CBJ-induced vasorelaxation in intact vessels with 0.54 +/- 0.34 g compared to 0.04 +/- 0.04 g in denuded vessels (P <.007). Subsequent addition of L-arginine resulted in a return of vasodilation in intact vessels. Additionally, CBJ infusion at a 1:100 dilution of estimated blood volume resulted in a 16% reduction of mean arterial blood pressure in anesthetized rats. This study suggests that, like red wine, CBJ has the capacity to exert in vitro and in vivo vasodilatory effects.
<i>Gata2</i> is required for the development of inner ear semicircular ducts and the surrounding perilymphatic space (2010)

Gata2 has essential roles in the development of many organs. During mouse inner ear morphogenesis, it is expressed in otic vesicle and the surrounding periotic mesenchyme from early on, but no defects in the ear development of Gata2 null mice have been observed before lethality at embryonic day (E) 10.5. Here, we used conditional gene targeting to reveal the role of Gata2 at later stages of inner ear development. We show that Gata2 is critically required from E14.5-E15.5 onward for vestibular morphogenesis. Without Gata2 the semicircular ducts fail to grow to their normal size and the surrounding mesenchymal cells are not removed properly to generate the perilymphatic space. Gata2 is the first factor known to control the clearing of the vestibular perilymphatic mesenchyme, but interestingly, it is not required for the formation of the cochlear perilymphatic areas, suggesting distinct molecular control for these processes.
Thromboxane mimics the pulmonary but not systemic vascular responses to bolus HCl injections in broiler chickens (1999)

Bolus i.v. injections of 1.2 N HCl elicit a rapid but transient pulmonary vasoconstriction in broiler chickens. In mammals, the pulmonary vasoconstrictive response to bolus acid injection depends on increased synthesis of thromboxane A2; however, the vascular responsiveness of domestic fowl to thromboxane previously had not been evaluated. In the present study, we tested the hypothesis that, if HCl triggers pulmonary vasoconstriction by stimulating thromboxane A2 synthesis in broilers, then bolus i.v. injections of the potent thromboxane A2 mimetic U44069 (9,11-dideoxy-9alpha,11alpha-epoxy-methanoprostaglandin++ + F2alpha; 1 micromol/mL; 0.5 mL injected volume) should trigger hemodynamic responses similar to those elicited by HCl (1.2 N; 1.5 mL injected volume). Both HCl and the thromboxane mimetic elicited twofold or greater increases in pulmonary vascular resistance, which in turn increased pulmonary arterial pressure by 50% despite concurrent reductions in cardiac output. The reductions in cardiac output were associated with reductions in stroke volume but not heart rate. The thromboxane mimetic also increased the total peripheral resistance, which minimized the reduction in mean systemic arterial pressure associated with the decrease in cardiac output. In contrast, HCl injections did not increase total peripheral resistance; consequently, the reduction in cardiac output caused the mean systemic arterial pressure to decrease by 30 mm Hg. Mannitol (2.5%; 1.5 mL) was injected i.v. as a volume control, and had no influence on any of the variables. This study provides the first direct evidence that thromboxane is a potent pulmonary vasoconstrictor in broilers, and provides support for the hypothesis that thromboxane mediates the pulmonary vasoconstrictive response to bolus i.v. injections of HCl. The differential response of the systemic vasculature to the thromboxane mimetic and HCl may indicate that cardiopulmonary responses to HCl injections are not mediated solely via thromboxane production. Alternatively, a direct dilatory effect of elevated hydrogen ion concentrations on the systemic vasculature may have counteracted any tendency for simultaneously evolved endogenous thromboxane to elicit systemic vasoconstriction.
Adenosine A<sub>3</sub>-receptor stimulation attenuates postischemic dysfunction through K<sub>ATP</sub> channels (1999)

We tested the hypothesis that selective adenosine A(3)-receptor stimulation reduces postischemic contractile dysfunction through activation of ATP-sensitive potassium (K(ATP)) channels. Isolated, buffer-perfused rat hearts (n = 8/group) were not drug pretreated (control) or were pretreated with adenosine (20 microM), 2-chloro-N(6)-(3-iodobenzyl)-adenosine-5'-N-methyluronamide (Cl-IB-MECA; A(3) agonist, 100 nM), Cl-IB-MECA + 8-(3-noradamantyl)-1,3-dipropylxanthine (KW-3902; A(1) antagonist, 5 microM), Cl-IB-MECA + glibenclamide (Glib; K(ATP)-channel blocker, 0. 3 microM), or Glib alone for 12 min before 30 min of global normothermic ischemia followed by 2 h of reperfusion. After 2 h of reperfusion, left ventricular developed pressure (LVDP, %baseline) in control hearts was depressed to 34 +/- 2%. In hearts pretreated with Cl-IB-MECA, there was a statistically significant increase in LVDP (50 +/- 6%), which was reversed with coadministration of Glib (37 +/- 1%). Control hearts also showed similar decreases in left ventricular peak positive rate of change in pressure (dP/dt). Therefore, the A(3) agonist significantly attenuated postischemic cardiodynamic injury compared with the control, which was reversed by Glib. Cumulative creatine kinase (CK in U/min) activity was most pronounced in the control group (10.4 +/- 0.6) and was significantly decreased by Cl-IB-MECA (7.5 +/- 0.4), which was reversed by coadministration of Glib (9.4 +/- 0.2). Coronary flow was increased during adenosine infusion (160% of baseline) but not during Cl-IB-MECA infusion. Effects of Cl-IB-MECA were not reversed by the specific A(1) antagonist KW-3902. We conclude that cardioprotection afforded by A(3)-receptor stimulation may be mediated in part by K(ATP) channels. Cl-IB-MECA may be an effective pretreatment agent that attenuates postischemic cardiodynamic dysfunction and CK release without the vasodilator liability of other adenosine agonists.
The aerodynamics of hovering insect flight. VI. Lift and power requirements (1984)

Abstract The lift and power requirements for hovering insect flight are estimated by combining the morphological and kinematic data from papers II and III with the aerodynamic analyses of papers IV and V. The lift calculations are used to evaluate the importance in hovering of two distinct types of aerodynamic mechanisms: (i) the usual quasi-steady mechanism, where the circulation for lift is primarily determined by translation of the wing, and (ii) rotational mechanisms, where the circulation is largely governed by wing rotation at either end of the wingbeat. Power estimates are compared with the available measurements of metabolic rate during hovering to investigate the role of elastic energy storage, the maximum mechanical power output of the flight muscles, and the muscle efficiency. The quasi-steady mechanism proves inadequate for the lift requirements of hover-flies using an inclined stroke plane, and for a ladybird beetle and a crane-fly hovering with a horizontal stroke plane. Observed angles of attack rule out lift enhancement by unsteady modifications to the quasi-steady mechanism, such as delayed stall, but the rotational lift mechanisms proposed in paper IV seem consistent with the kinematics. The rotational mechanisms rely on concentrated vortex shedding from the leading edge during rotation, with attachment of that vorticity as a leading edge separation bubble during the subsequent half-stroke. Strong leading edge vortex shedding should result from delayed pronation for the hover-fly, a near fling and partial fling for the ladybird, and profile flexion for the crane-fly (the flex mechanism). The kinematics for the other insects hovering with a horizontal stroke plane are basically the same as for the anomalous crane-fly, and the quasi-steady mechanism cannot be accepted for them while rejecting it for the crane-fly. All of these insects flex their wings in a similar manner during rotation, and could use the flex mechanism for lift generation. The implication is that most, if not all, hovering animals do not rely on quasi-steady aerodynamics, but use rotational lift mechanisms instead. It is not possible to reconcile the power estimates with the commonly accepted values of both the mechanochemical efficiency of insect flight muscle (about 25%) and its maximum mechanical power output (about 20 W N-1 of muscle). Maximum efficiencies of 12-29% could be obtained only if there is no elastic storage of the kinetic energy of the flapping wings, but this would require more than twice the accepted value for maximum mechanical power output. The available evidence suggests that substantial elastic storage does occur, and that the maximum mechanical power output is close to the accepted value. If so, then the efficiency of both fibrillar and non-fibrillar flight muscle is likely to be only 5-9%.
Probe Placement and Power Levels in Contact Transscleral Neodymium:YAG Cyclophotocoagulation (1990)

Transscleral cyclophotocoagulation using a free-running, thermal-mode neodymium:YAG laser with a 2.2-mm-diameter sapphire-tipped contact probe was performed on 27 enucleated human eyes to investigate the effect of probe placement and power levels. We concluded from gross, light, and scanning electron microscopic examinations that a tissue destructive effect on ciliary body and epithelium was produced by positioning the anterior edge of the probe tip 0.5 to 1.0 mm from the visible limbus using a 5- to 9-W power setting for 0.7 second. An 11-W power setting resulted in extensive loss of anatomic integrity of the ciliary body. Limbal probe placement produced significant iris and lens damage while positioning the probe 1.5 mm posterior to the limbus affected primarily pars plana. Damage to the sclera was not observed using this method of cyclophotocoagulation.
Keratin 14 protein in cultured nonparenchymal rat hepatic epithelial cells: Characterization of keratin 14 and keratin 19 as antigens for the commonly used mouse monoclonal antibody OV‐6 (1993)

We have recently reported that cell lines of nonparenchymal origin isolated from rat liver and pancreas, which have been suggested to be the progeny of a facultative stem cell compartment in vivo, express an unusual combination of keratins (K). These cell lines express K8 and K14 but not K18 and K5, their normal partners in filament formation (Bisgaard HC, Thorgeirsson SS, J Cell Physiol 147:333-343, 1991). However, upon spontaneous transformation and differentiation toward a hepatoblastlike progeny, K14 expression is abrogated and replaced by expression of K18 (Wirth et al., Electrophoresis 13:305-332, 1992). In the study presented here, we confirmed by protein sequence analysis that K14 was a major component of the intermediate filaments in a nonparenchymal cell line of hepatic origin. Immunocytochemical analysis of the cells in monolayer demonstrated that K8 as well as K14 were incorporated in the cellular cytoskeleton. Further analysis by immunoprecipitation showed that filament complexes were formed between K8 and K14 as atypical partners. Thus, we concluded that in some nonparenchymal cell lines isolated from rat liver, K8 and K14 form a major intermediate filament network. Finally, we showed that an antibody widely used in studies of the cell lineages of hepatic and pancreatic tissues and their neoplasms, the mouse monoclonal antibody OV-6, recognizes a common epitope in K14 and K19.
An adaptive data driven model for characterizing rock properties from Drilling data (2011)

Autonomous operation of blast hole drill rigs requires monitoring of drilling parameters known as "Measurement While Drilling" (MWD) data. From these data, rock properties can be inferred. A supervised classification scheme is usually used to map MWD data inputs to rock type outputs given some labeled training data. However, the geology has no definite ground truth that can allow a reliable labeling of the training data, nor is there a clear input-output pair connection between the MWD data and the rock types. In this paper, an adaptive unsupervised approach is proposed to estimate the rock types in a data driven way by minimizing the entropy gradient of the characterizing measure "Optimized Adjusted Penetration Rate" (OAPR). Neither data labeling nor fixed model parameters are required because of the data driven nature of the algorithm. Experimental results illustrate the effectiveness of our solution.
Proinflammatory cytokines and viral respiratory disease in pigs (2000)

Swine influenza virus (SIV), porcine respiratory coronavirus (PRCV) and porcine reproductive and respiratory syndrome virus (PRRSV) are enzootic viruses causing pulmonary infections in pigs. The first part of this review concentrates on known clinical and pathogenetic features of these infections. SIV is a primary respiratory pathogen; PRCV and PRRSV, on the contrary, tend to cause subclinical infections if uncomplicated but they appear to be important contributors to multifactorial respiratory diseases. The exact mechanisms whereby these viruses cause symptoms and pathology, however, remain unresolved. Classical studies of pathogenesis have revealed different lung cell tropisms and replication kinetics for each of these viruses and they suggest the involvement of different lung inflammatory responses or mediators. The proinflammatory cytokines interferon- (IFN-), tumour necrosis factor- (TNF-) and interleukin-1 (IL-1) have been shown to play key roles in several respiratory disease conditions. The biological effects of these cytokines and their involvement in human viral respiratory disease are discussed in the second part of this review. The third part summarises studies that were recently undertaken in the authors' laboratory to investigate the relationship between respiratory disease in pigs and bioactive lung lavage levels of IFN-, TNF- and IL-1 during single and combined infections with the above viruses. In single SIV infections, typical signs of swine "flu" were tightly correlated with an excessive and coordinate production of the 3 cytokines examined. PRCV or PRRSV infections, in contrast, were subclinical and did not induce production of all 3 cytokines. Combined infections with these 2 subclinical respiratory viruses failed to potentiate disease or cytokine production. After combined inoculation with PRCV followed by bacterial lipopolysaccharide, both clinical respiratory disease and TNF-/IL-1 production were markedly more severe than those associated with the respective single inoculations. Taken together, these data are the first to demonstrate that proinflammatory cytokines can be important mediators of viral respiratory diseases in pigs. cytokines / pathogenesis / swine influenza virus (SIV) / porcine respiratory coronavirus (PRCV) / porcine reproductive and respiratory syndrome virus (PRRSV)