gebhart/patrepeval huggingface dataset:
Bacillus megaterium Suppresses Major Thailand Rice Diseases (2009)

The fungal disease blast caused by Pyricularia oryzae and sheath blight disease caused by Rhizoctonia solani are major diseases of rice in Thailand. Recently emerging of dirty panicle disease is contributing to an additional challenge to the rice disease panorama. Dependence on fungicidal sprays for disease control adds expense to farmers and contributes to non-target damage from fungicides employed. No single rice variety has high levels of genetic resistance to all major rice diseases. Because of these challenges and gaps in the disease management strategy, integrated disease management that employs biological control measure is becoming increasingly attractive for rice producers. Biological control product formulated based upon Bacillus megaterium has been produced and tested in the rice field for its ability to control blast and sheath blight. During off season rice testing in Uttaradit province, Thailand, water-soluble granules showed a high level of disease efficacy for controlling sheath blight, rice blast and dirty panicle disease. Applications were made as a seed treatment once (at 1 g formulation/100 g seed), followed by 3 sprays at the seedling, tillering and flowering stages. The application rate was 200 g formulation/20 L water/rai application rate. The water-soluble granules of B. megaterium show potential to increase yield of rice when weed populations are kept under control thresholds and recommended amount of N-fertilizer was applied. Besides the results with the 3 aforementioned diseases, this biological control option has selected to be tested for neck blast (P. oryzae) efficacy. Testing results are being disseminated to local and regional farmers who are interested to produce rice organically and reduce their fungicide use.
Synthetic DNA (2013)

With world wide data predicted to exceed 40 trillion gigabytes by 2020, big data storage is a very real and escalating problem. Herein, we discuss the utility of synthetic DNA as a robust and eco-friendly archival data storage solution of the future.
Probing Perovskite Inhomogeneity beyond the Surface: TOF-SIMS Analysis of Halide Perovskite Photovoltaic Devices (2018)

Understanding the origins and evolution of inhomogeneity in halide perovskite solar cells appears to be a key to advancing the technology. Time-of-flight secondary-ion mass spectrometry (TOF-SIMS) is one of the few techniques that can obtain chemical information from all components of halide organic-inorganic perovskite photovoltaics in one-dimension (standard depth profiling), two-dimensions (high-resolution 100 nm imaging), as well as three-dimensions (tomography combining high-resolution imaging with depth profiling). TOF-SIMS has been used to analyze perovskite photovoltaics made by a variety of methods, and the breadth of insight that can be gained from this technique is illustrated here including: cation uniformity (depth and lateral), changes in chemistry upon alternate processing, changes in chemistry upon degradation (including at interfaces), and lateral distribution of passivating additives. Using TOF-SIMS on multiple perovskite compositions, we show that the information regarding halide perovskite formation as well as inhomogeneity critical to device performance can be extracted providing one of the best proxies for understanding compositional changes resulting from degradation. We also describe in detail the measurement artifacts and recommend the best practices that enable unique insight regarding halide perovskite solar cell materials and devices.
Aerotaxis in Halobacterium salinarium is methylation-dependent (1995)

The behavioural response to a gradient of oxygen (aerotaxis) has been characterized in the archaeon, Halobacterium salinarium. When the gas surrounding a drop of H. salinarium strain S9-P culture was changed abruptly from 10% (v/v) O2 to 100% N2, the bacteria transiently increased the frequency of reversing before they adapted and resumed random swimming. When the gas was returned to 10% O2 the bacteria responded by swimming smoothly for approximately 45 s. Aerotaxis was strongest when respiration in H. salinarium was highest and when bacteriorhodopsin and halorhodopsin were not contributing to the proton motive force. Starvation for methionine of the auxotrophic H. salinarium essentially abolished the step-down aerotactic response. Methanol production from demethylation of methyl-accepting chemotaxis proteins was transiently increased in H. salinarium S9-P by a step down or step up in oxygen concentration, as observed in methylation-dependent chemotaxis in H. salinarium. The taxis-negative and methyltransferase-deficient mutant, H. salinarium strain Pho72 did not exhibit changes in methanol release in response to aerotaxis or chemotaxis stimuli. This is the first report of an aerotactic response that is dependent on methylation of methyl-accepting chemotaxis proteins. Aerotaxis in Escherichia coli and Salmonella typhimurium is independent of transducer methylation.
Microgels as viscosity modifiers influence lubrication performance of continuum (2019)

Biocompatible microgels have been demonstrated to act as excellent lubricants, however, the influence of the continuum on their overall mechanical performance has been neglected so far. In this work, the mechanical performance of colloidal whey protein microgels (hydrodynamic diameter ∼100 nm measured using dynamic light scattering and atomic force microscopy) of different rigidity dispersed in Newtonian (buffer and corn syrup) or complex non-Newtonian fluids (xanthan gum) is investigated for the first time via rheology and soft tribology. Dispersions of both soft microgels (G' ∼ 100.0 Pa) and hard microgels (G' ∼ 10.0 kPa) were observed to act as thickeners in buffer as well as in low viscosity corn syrup and correspondingly reduced the friction, latter decreased as a function of the increased rigidity of the microgels. Differently, in high viscosity continuum, the microgels acted as thinning agents and increased the friction. In the lubrication limit, microgels in buffer or corn syrup behaved as Newtonian fluids with effective viscosity corresponding to their second Newtonian plateau value (η∞). However, the lubrication performance of the microgels dispersed in the complex fluid (xanthan gum) could not be described quantitatively by η∞. For the low viscosity xanthan gum, the microgels had no influence on friction. Nevertheless, for the high viscosity counterparts, the soft microgels acted as thinning agents whilst the hard microgels accelerated the onset of elastohydrodynamic regime. This study demonstrates that microgels act as viscosity modifiers directly influencing the tribological performance, depending upon a subtle interplay of rheological properties of the particles and continuum.
A Consistent Model for the SANOS Programming Operation (2007)

An accurate model for the SANOS programming operation has been developed. Excellent agreement between measurements and simulations in a large range of voltages and times is obtained, taking leakage through the gate stack and Frenkel-Poole detrapping into account. The model is exploited to predict the impact of the programming conditions on the retention behavior.
Access control to web pages based on user browsing behavior (2017)

Nowadays, access control to Web pages relay mostly on identification and authentication. After successful authentication, however, subsequent access may not necessarily be performed by the same user. Aimed at separating identity authentication and behavior authentication in open network environments, this paper proposes an access control method based on the analysis of user behavior in Web browsing as an additional access control mechanism to traditional identity authentication. The paper provides the definition of user behavior, uses browsing time and navigated path to determine the normality of user behavior based on the result of comparing the value calculated using a proposed algorithm with a threshold, thus modeling user behavior in both temporal and spatial dimensions. The proposed method relies on a database that contains the frequency of previous access to the path by the same user. Experiment shows that the proposed method can detect abnormal behavior while adapting to continuous changes in user behavior and can thus be used to prevent the theft of user accounts to improve network security.
Fabrication and analysis of a low-loss in-fiber active polymer waveguide (2004)

We present a method for fabricating an in-fiber electro-optic polymer waveguide within a D-shaped optical fiber. A combined process of selective chemical etching and spin coating creates a 2-cm in-fiber poly(methyl methacrylate)-DR1 dye polymer waveguide section with an overall insertion loss of micro 1.6 dB at 1550 nm. Numerical simulations show that, for in-fiber polymer waveguides to have low loss, the polymer layer's thickness must be kept below a certain value so that it will not support slab waveguide modes. Long transition regions between the unetched fiber and the polymer waveguide section also reduce loss. We analyze the efficiency of an in-fiber polymer waveguide by simulating its theoretical performance as an electro-optic modulator.
Improvement of Spatial Frequency Response Characteristics in Optical Scanning System with Coaxial Dual Beams (1996)

A new method to improve resolution characteristics in an optical scanning system with orthogonally polarized dual beams and differential detection is proposed. Improvement of the spatial response by a factor of 1.4 was confirmed experimentally and numerically.
A Channel Shortening Approach for Nonlinear Acoustic Echo Cancellation (2007)

Acoustic echo cancellers (AECs) are critical for enhancing audio quality in many telecommunication systems. The problem is challenging because the long room impulse response slows the convergence rate and increases the computational complexity of the AEC designs. Nonlinearity in the power amplifier or the loudspeaker further exacerbates the problem. In this paper, we propose a novel AEC algorithm when the loudspeaker-enclosure-microphone system is described by a Hammerstein model. We show that by introducing a shortening filter, the length of the "effective" acoustic echo path is reduced considerably. An adaptive algorithm is developed for the proposed nonlinear AEC structure; its effectiveness is illustrated by computer simulations.
Characterization of the growth and sporulation behavior of <i>Penicillium roquefortii</i> in solid substrate fermentation by material and bioenergetic balances (1992)

When Penicillium roquefortii is grown on two kinds of buckwheat, exhibiting a low [0.85 g water/g dry matter (DM), buckwheat A] and a high [1.5 g water/g initial dry matter (IDM), buckwheat B] water content, a marked difference in the mode of development of the fungus is observed. Material balances for buckwheat A show that growth does not stop because of nutrient exhaustion. Analysis of water balance shows that active growth proceeds with a permanent limitation by the turgor potential which disappears when the water activity of the substrate is close to 0.96, thus arresting growth. This limitation causes intensive water excretion from the system due to the lowering of the water activity of the substrate. The water content of the mycelium thus decreases from 79% at the beginning of the cultivation to 74% when the growth stops. This is linked to a substantial oxidative metabolism and a high sporulation efficiency, close to 0.85. The spores obtained have a low dry weight and a reduced nitrogen content. In the case of buckwheat B, the active growth is shown to stop because of available mineral nitrogen depletion. No significant decrease in the water activity of the substrate is found during the protein synthesis, and the turgor potential remains high at the end of this period. Culture proceeds with new wall synthesis; the sporulation efficiency remains high and the spores obtained exhibit a high dry weight and a high nitrogen content. The bioenergetic balances show that the P/O ratio varies with the kind of substrate used; its value is close to 1.56 for the low water medium and to 2.21 for the high one. The ATP yield Z is always close to 1, and fungal development occurs with limitations of both anabolism and catabolism on buckwheat B and only of anabolism and catabolism on buckwheat B and only of anabolism on buckwheat A.
Study of element patterns and excitations of the line feeds of the spherical reflector antenna in Arecibo (1986)

The element patterns of the circularly polarized line feeds for the spherical reflector in Arecibo are calculated, showing strong endfire radiation. The radiation fields of the line feeds are then obtained by adding up the contributions from all elements. The optimum excitation of the feed is found by an approximate stationary-phase solution of the radiation field. This shows that the element pattern gives a large phase contribution to the excitation, because of the finite diameter of the feed. If not corrected for, this phase error can cause losses up to 1.5 dB. The excitation is optimized further by cutting and trying. The validity of the analytical models is checked by calculation of the radiation pattern of the existing 96.6 ft 430 MHz feed. The excitation is modeled from measured phases along the feed. The calculated radiation patterns show good agreement with the measurements, including the phase errors and the dip in the center. By using the proposed new excitation it should be possible to increase the efficiency of the 96.6 ft feed by 0.7 dB and to increase the efficiency of the 40 ft feeds at higher frequencies by even more.
Migraine and obesity: metabolic parameters and response to a weight loss programme (2014)

Among obese adolescents with migraine who underwent an intervention programme for weight loss, patients who did not become migraine-free showed higher adiposity values than those who became migraine-free. Patients with insulin resistance had 3.5 times the odds of having persistence of migraine compared with those without.
Supercritical Carbon Dioxide Brayton Cycles Driven by Solar Thermal Power Tower System (2015)

This chapter starts with a background about concentrating solar power systems and thermal energy storage systems and then a detailed literature review about concentrated solar power systems and supercritical Brayton carbon dioxide cycles. Next, a mathematical model was developed and presented which generates and optimizes a heliostat field effectively. This model was developed to demonstrate the optimization of a heliostat field using differential evolution, which is an evolutionary algorithm. The current model illustrates how to employ the developed model and its advantages. The optimization process calculates the optical performance parameters at every step of the optimization considering all the heliostats; thus yields accurate results as discussed in this chapter. On the other hand, complete mathematical model of supercritical CO 2 Brayton cycles when integrated with solar thermal power tower system was presented and discussed.
Design of an Embedded Fingerprint Matcher System (2006)

The current technological age is demanding reliable and cost-effective personal authentication systems for a wide range of daily use applications such as access control, electronic commerce, ID verification... where security and confidentiality performance of the information is needed. Biometrics-based authentication techniques (e.g. face, iris, fingerprint recognition...) in conjunction with embedded systems technologies bring a challenging solution to this need. This paper describes the hardware-software co-design of a computational platform responsible for matching two fingerprint minutiae sets. A novel system concept is suggested by making use of reconfigurable architectures
High-Performance Neural Networks for Visual Object Classification (2011)

We present a fast, fully parameterizable GPU implementation of Convolutional Neural Network variants. Our feature extractors are neither carefully designed nor pre-wired, but rather learned in a supervised way. Our deep hierarchical architectures achieve the best published results on benchmarks for object classification (NORB, CIFAR10) and handwritten digit recognition (MNIST), with error rates of 2.53%, 19.51%, 0.35%, respectively. Deep nets trained by simple back-propagation perform better than more shallow ones. Learning is surprisingly rapid. NORB is completely trained within five epochs. Test error rates on MNIST drop to 2.42%, 0.97% and 0.48% after 1, 3 and 17 epochs, respectively.
Lazy evaluation of transactions in database systems (2014)

Existing database systems employ an \textit{eager} transaction processing scheme---that is, upon receiving a transaction request, the system executes all the operations entailed in running the transaction (which typically includes reading database records, executing user-specified transaction logic, and logging updates and writes) before reporting to the client that the transaction has completed. We introduce a \textit{lazy} transaction execution engine, in which a transaction may be considered durably completed after only partial execution, while the bulk of its operations (notably all reads from the database and all execution of transaction logic) may be deferred until an arbitrary future time, such as when a user attempts to read some element of the transaction's write-set---all without modifying the semantics of the transaction or sacrificing ACID guarantees. Lazy transactions are processed deterministically, so that the final state of the database is guaranteed to be equivalent to what the state would have been had all transactions been executed eagerly.
An M<sub>2</sub>L<sub>4</sub> Molecular Capsule with an Anthracene Shell: Encapsulation of Large Guests up to 1 nm (2011)

A new M(2)L(4) molecular capsule with an aromatic shell was prepared using two Pd(II) ions and four bisanthracene ligands. The self-assembled capsule possesses a cavity with a diameter of ~1 nm that can encapsulate medium-sized spherical and planar molecules as well as a very large molecule (C(60)) in quantitative yields. The encapsulated guests are fully segregated and shielded from the external environment by the large anthracene panels.
The Drosophila <i>chk2</i> Gene <i>loki</i> Is Essential for Embryonic DNA Double-Strand-Break Checkpoints Induced in S Phase or G2 (2003)

Abstract Cell cycle checkpoints are signal transduction pathways that control the order and timing of cell cycle transitions, ensuring that critical events are completed before the occurrence of the next cell cycle transition. The Chk2 family of kinases is known to play a central role in mediating the cellular responses to DNA damage or DNA replication blocks in various organisms. Here we show through a phylogenetic study that the Drosophila melanogaster serine/threonine kinase Loki is the homolog of the yeast Mek1p, Rad53p, Dun1p, and Cds1 proteins as well as the human Chk2. Functional analyses allowed us to conclude that, in flies, chk2 is involved in monitoring double-strand breaks (DSBs) caused by irradiation during S and G2 phases. In this process it plays an essential role in inducing a cell cycle arrest in embryonic cells. Our results also show that, in contrast to C. elegans chk2, Drosophila chk2 is not essential for normal meiosis and recombination, and it also appears to be dispensable for the MMS-induced DNA damage checkpoint and the HU-induced DNA replication checkpoint during larval development. In addition, Drosophila chk2 does not act at the same cell cycle phases as its yeast homologs, but seems rather to be involved in a pathway similar to the mammalian one, which involves signaling through the ATM/Chk2 pathway in response to genotoxic insults. As mutations in human chk2 were linked to several cancers, these similarities point to the usefulness of the Drosophila model system.
Cinnarizine—a labyrinthine sedative (1980)

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Two-dimensional spectral analysis of mesospheric airglow image data (1997)

A technique to analyze short-period (<1 hour) gravity wave structure in all-sky images of the airglow emissions is described. The technique involves spatial calibration, star removal, geographic projection, regridding, and flat fielding of the data prior to the determination of the horizontal wave parameters (wavelength, velocity, and period), by use of standard two-dimensional Fourier analysis techniques. The method was developed to exploit the information that is now available with wide-field solid state imaging systems. This technique permits interactive and quantitative investigations of large, complex data sets. Such studies are important for investigating gravity wave characteristics, their interaction with the airglow emissions, and their geographic and seasonal variability. We study one event of this type here and present possible evidence of a nonlinear wave-wave interaction in the upper atmosphere.
NHC-carbene cyclopentadienyl iron based catalyst for a general and efficient hydrosilylation of imines (2011)

A general and efficient hydrosilylation of imines catalysed by a well defined NHC-carbene cyclopentadienyl iron complex has been developed. Both aldimines and ketimines are converted to the corresponding amines under mild conditions, and under visible light activation.
Metal-assisted chemical etching of silicon and the behavior of nanoscale silicon materials as Li-ion battery anodes (2015)

This review outlines the developments and recent progress in metal-assisted chemical etching of silicon, summarizing a variety of fundamental and innovative processes and etching methods that form a wide range of nanoscale silicon structures. The use of silicon as an anode for Li-ion batteries is also reviewed, where factors such as film thickness, doping, alloying, and their response to reversible lithiation processes are summarized and discussed with respect to battery cell performance. Recent advances in improving the performance of silicon-based anodes in Li-ion batteries are also discussed. The use of a variety of nanostructured silicon structures formed by many different methods as Li-ion battery anodes is outlined, focusing in particular on the influence of mass loading, core-shell structure, conductive additives, and other parameters. The influence of porosity, dopant type, and doping level on the electrochemical response and cell performance of the silicon anodes are detailed based on recent findings. Perspectives on the future of silicon and related materials, and their compositional and structural modifications for energy storage via several electrochemical mechanisms, are also provided.
Risk Factors for Lower Extremity Amputation in Persons With Diabetes (1995)

LEA shares a risk factor profile with other microvascular complication of diabetes. Thus, control of blood glucose and blood pressure should reduce risk for amputation. African-Americans do not appear to be at increased risk for diabetes-related amputation when access to medical care is comparable.