gebhart/patrepeval huggingface dataset:
Luteinizing hormone stimulates the formation of inositol trisphosphate and cyclic AMP in rat granulosa cells. Evidence for phospholipase C generated second messengers in the action of luteinizing hormone (1986)

The following studies were conducted to determine whether luteinizing hormone (LH), a hormone which increases cellular levels of cyclic AMP, also provokes increases in 'second messengers' derived from inositol lipid metabolism (i.e. inositol phosphates and diacylglycerol). Rat granulosa cells isolated from mature Graafian follicles were prelabelled for 3 h with myo-[2-3H]inositol. LH provoked rapid (5 min) and sustained (up to 60 min) increases in the levels of inositol mono-, bis, and trisphosphates (IP, IP2 and IP3, respectively). Time course studies revealed that IP3 was formed more rapidly than IP2 and IP following LH treatment. The response to LH was concentration-dependent with maximal increases at LH concentrations of 1 microgram/ml. LiCl (2-40 mM) enhanced the LH-provoked accumulation of all [3H]inositol phosphates, presumably by inhibiting the action of inositol phosphate phosphatases. The effectiveness of LH, however, was dependent on the concentration of lithium employed; maximal increases in IP were observed at 10 mM-LiCl, whereas maximal increases in IP2 and IP3 were observed at 20 mM- and 40 mM-LiCl, respectively. The stimulatory effects of LH on inositol phosphate and progesterone accumulation were also compared with changes in cyclic nucleotide levels. LH rapidly increased levels of inositol phosphates, progesterone and cyclic AMP, but transiently reduced levels of cyclic GMP. These results demonstrate that LH increases both cyclic AMP and inositol trisphosphate (and presumably diacylglycerol) in rat granulosa cells. Our findings suggest that two messenger systems exist to mediate the action of LH in granulosa cells.
Fluorination of polyethylene films (1989)

Abstract Fluorination of HDPE films (100 and 1800 μm thick) and LDPE films (100 μm thick) with elemental fluorine is described. The films were fluorinated at temperatures between 40°C and 100°C. The degree of fluorination was increased by increasing the concentration of fluorine in the F 2 /N 2 gas mixture. A diffusion‐controlled process was indicated by plotting the measured depth of fluorination against the square root of fluorination time. The chemistry of the process was studied by ESCA measurements or by energy dispersive analyses in the scanning electron microscope.
Erratum: News and Notes, Vol. 120, no. 3112 (20 August 1954) (1954)

The statement attributed to Joshua Lederberg in the report of the Oak Ridge Conference on Genetic Recombination [ Science 120, 291 (20 Aug.)] to the effect that streptomycin treatment will improve the crossing of certain strains of bacteria, was in error. There is no demonstrated action of streptomycin on the fertility of E. coli crosses.
TNF Superfamily Protein-Protein Interactions: Feasibility of Small- Molecule Modulation (2015)

The tumor necrosis factor (TNF) superfamily (TNFSF) contains about thirty structurally related receptors (TNFSFRs) and about twenty protein ligands that bind to one or more of these receptors. Almost all of these cell surface protein-protein interactions (PPIs) represent high-value therapeutic targets for inflammatory or immune modulation in autoimmune diseases, transplant recipients, or cancers, and there are several biologics including antibodies and fusion proteins targeting them that are in various phases of clinical development. Small-molecule inhibitors or activators could represent possible alternatives if the difficulties related to the targeting of protein-protein interactions by small molecules can be addressed. Compounds proving the feasibility of such approaches have been identified through different drug discovery approaches for a number of these TNFSFR-TNFSF type PPIs including CD40-CD40L, BAFFR-BAFF, TRAIL-DR5, and OX40-OX40L. Corresponding structural, signaling, and medicinal chemistry aspects are briefly reviewed here. While none of these small-molecule modulators identified so far seems promising enough to be pursued for clinical development, they provide proof-of-principle evidence that these interactions are susceptible to small-molecule modulation and can serve as starting points toward the identification of more potent and selective candidates.
15‐LO/15‐HETE Mediated Vascular Adventitia Fibrosis via p38 MAPK‐Dependent TGF‐β (2013)

15-Lipoxygenase/15-hydroxyeicosatetraenoic acid (15-LO/15-HETE) is known to modulate pulmonary vascular medial hypertrophy and intimal endothelial cells migration and angiogenesis after hypoxia. However, it is unclear whether 15-HETE affects the adventitia of the pulmonary arterial wall. We performed immunohistochemistry, adventitia fibrosis, pulmonary artery fibroblasts phenotype and extracellular matrix (ECM) deposition to determine the role of 15-HETE in hypoxia-induced pulmonary vascular adventitia remodeling. Our studies showed that O2 deprivation induced adventitia hypertrophy of pulmonary arteries with ECM accumulation in both humans with pulmonary arterial hypertension and hypoxic rats. Hypoxia induced 15-LO expression in adventitia. With the inhibitor, NDGA depressed the hypoxia induced ECM deposition and 15-LO production in hypoxic rats. Hypoxia up-regulated the expression of α-SMA, type-Ia collagen and fibronectin in cultured fibroblasts, which seemed to be due to the increased 15-LO/15-HETE. Exogenous 15-HETE mediated the ECM and phenotypic alterations of the fibroblasts as well. The 15-LO/15-HETE induced adventitia fibrosis and fibroblasts phenotypic alterations depended on signaling of the transforming growth factor-β1 (TGF-β1)/Smad2/3 pathway. P38 mitogen-activated protein kinase (p38 MAPKs) was likely to mediate 15-LO induced TGF-β1 and Smad2/3 activation after hypoxia. The results suggest that adventitia fibrosis is an important event in the hypoxia induced pulmonary arterial remodeling, which relies on 15-LO/15-HETE induced p38 MAPK-dependent TGF-β1/Smad2/3 intracellular signaling systems.
Grass Cell Walls: A Story of Cross-Linking (2017)

Cell wall matrices are complex composites mainly of polysaccharides, phenolics (monomers and polymers), and protein. We are beginning to understand the synthesis of these major wall components individually, but still have a poor understanding of how cell walls are assembled into complex matrices. Valuable insight has been gained by examining intact components to understand the individual elements that make up plant cell walls. Grasses are a prominent group within the plant kingdom, not only for their important roles in global agriculture, but also for the complexity of their cell walls. Ferulate incorporation into grass cell wall matrices (C3 and C4 types) leads to a cross-linked matrix that plays a prominent role in the structure and utilization of grass biomass compared to dicot species. Incorporation of <i>p</i>-coumarates as part of the lignin structure also adds to the complexity of grass cell walls. Feruoylation results in a wall with individual hemicellulosic polysaccharides (arabinoxylans) covalently linked to each other and to lignin. Evidence strongly suggests that ferulates not only cross-link arabinoxylans, but may be important factors in lignification of the cell wall. Therefore, the distribution of ferulates on arabinoxylans could provide a means of structuring regions of the matrix with the incorporation of lignin and have a significant impact upon localized cell wall organization. The role of other phenolics in cell wall formation such as <i>p</i>-coumarates (which can have concentrations higher than ferulates) remains unknown. It is possible that <i>p</i>-coumarates assist in the formation of lignin, especially syringyl rich lignin. The uniqueness of the grass cell wall compared to dicot sepcies may not be so much in the gross composition of the wall, but how the distinctive individual components are organized into a functional wall matrix. These features are discussed and working models are provided to illustrate how changing the organization of feruoylation and <i>p</i>-coumaroylation could lead to differing cell wall properties.
Presence of a member of the Tc1-like transposon family from nematodes and Drosophila within the vasotocin gene of a primitive vertebrate, the Pacific hagfish Eptatretus stouti. (1992)

Molecular cloning of the vasotocin gene of a cyclostome, the Pacific hagfish Eptatretus stouti, reveals, in contrast to other known members of the vertebrate vasopressin/oxytocin hormone gene family, an unusual exon-intron organization. Although the location of three exons and two introns is conserved, an additional intron is present 5' of the coding region of the hagfish gene. The third intron, which is greater than 14 kilobase pairs in size, contains on the opposite DNA strand to that encoding vasotocin an open reading frame exhibiting striking similarity to the putative transposase of Tc1-like nonretroviral mobile genetic DNA elements, so far reported only from nematodes and Drosophila. The hagfish element, called Tes1, is flanked by inverted terminal repeats representing an example of the existence of a typical inverted terminal-repeat transposon within vertebrates. The presence of Tc1-like elements in nematodes, Drosophila, and cyclostomes indicates that these genetic elements have a much broader phylogenetic distribution than hitherto expected.
A Comparison of Electrical and Optical Dispersion Compensation for 111-Gb/s POLMUX–RZ–DQPSK (2009)

In this paper, we experimentally investigate the tolerance of 111-Gb/s polarization multiplexed return-to-zero differential quadrature phase-shift keying (POLMUX-RZ-DQPSK) signals with respect to nonlinear impairments in a link with either (inline) optical or (receiver-side) electrical dispersion compensation. After transmission of more than 2000 km of LEAF, a comparable nonlinear tolerance is observed for both dispersion maps. However, we observe that in the presence of differential group delay (DGD) the nonlinear tolerance of the transmission link with in-line optical dispersion compensation is reduced significantly, whereas the nonlinear tolerance of the configuration with receiver-side dispersion compensation is virtually unaffected.
Dread Risk, September 11, and Fatal Traffic Accidents (2004)

People tend to fear dread risks, that is, low-probability, high-consequence events, such as the terrorist attack on September 11, 2001. If Americans avoided the dread risk of flying after the attack and instead drove some of the unflown miles, one would expect an increase in traffic fatalities. This hypothesis was tested by analyzing data from the U.S. Department of Transportation for the 3 months following September 11. The analysis suggests that the number of Americans who lost their lives on the road by avoiding the risk of flying was higher than the total number of passengers killed on the four fatal flights. I conclude that informing the public about psychological research concerning dread risks could possibly save lives.
Carbohydrates in plant immunity and plant protection: roles and potential application as foliar sprays (2014)

Increasing interest is devoted to carbohydrates for their roles in plant immunity. Some of them are elicitors of plant defenses whereas other ones act as signaling molecules in a manner similar to phytohormones. This review first describes the main classes of carbohydrates associated to plant immunity, their role and mode of action. More precisely, the state of the art about perception of "PAMP, MAMP, and DAMP (Pathogen-, Microbe-, Damage-Associated Molecular Patterns) type" oligosaccharides is presented and examples of induced defense events are provided. A particular attention is paid to the structure/activity relationships of these compounds. The role of sugars as signaling molecules, especially in plant microbe interactions, is also presented. Secondly, the potentialities and limits of foliar sprays of carbohydrates to stimulate plant immunity for crop protection against diseases are discussed, with focus on the roles of the leaf cuticle and phyllosphere microflora.
Myeloid-Derived Suppressor Cells Prevent Type 1 Diabetes in Murine Models (2010)

Effective immunotherapy for type 1 diabetes (T1D) relies on active induction of peripheral tolerance. Myeloid-derived suppressor cells (MDSCs) play a critical role in suppressing immune responses in various pathologic settings via multiple mechanisms, including expansion of regulatory T cells (Tregs). In this study, we investigated whether MDSCs could act as APCs to induce expansion of Ag-specific Tregs, suppress T cell proliferation, and prevent autoimmune T1D development. We found that MDSC-mediated expansion of Tregs and T cell suppression required MHC-dependent Ag presentation. A murine T1D model was established in INS-HA/RAG(-/-) mice in which animals received CD4-HA-TCR transgenic T cells via adoptive transfer. We found a significant reduction in the incidence of diabetes in recipients receiving MDSC plus HA, but not OVA peptide, leading to 75% diabetes-free mice among the treated animals. To test further whether MDSCs could prevent diabetes onset in NOD mice, nondiabetic NOD/SCID mice were injected with inflammatory T cells from diabetic NOD mice. MDSCs significantly prevented diabetes onset, and 60% of MDSC-treated mice remained diabetes free. The pancreata of treated mice showed significantly lower levels of lymphocyte infiltration in islet and less insulitis compared with that of the control groups. The protective effects of MDSCs might be mediated by inducing anergy in autoreactive T cells and the development of CD4(+)CD25(+)Foxp3(+) Tregs. Thist study demonstrates a remarkable capacity of transferred MDSCs to downregulate Ag-specific autoimmune responses and prevent diabetes onset, suggesting that MDSCs possess great potential as a novel cell-based tolerogenic therapy in the control of T1D and other autoimmune diseases.
The Croonian Lecture 1998. Identification of a protein kinase cascade of major importance in insulin signal transduction (1999)

Diabetes affects 3% of the European population and 140 million people worldwide, and is largely a disease of insulin resistance in which the tissues fail to respond to this hormone. This emphasizes the importance of understanding how insulin signals to the cell's interior. We have recently dissected a protein kinase cascade that is triggered by the formation of the insulin 'second messenger' phosphatidylinositide (3,4,5) trisphosphate (PtdIns (3,4,5)P3) and which appears to mediate many of the metabolic actions of this hormone. The first enzyme in the cascade is termed 3-phosphoinositide-dependent protein kinase-1 (PDK1), because it only activates protein kinase B (PKB), the next enzyme in the pathway, in the presence of PtdIns (3,4,5)P3. PKB then inactivates glycogen synthase kinase-3 (GSK3). PDK1, PKB and GSK3 regulate many physiological events by phosphorylating a variety of intracellular proteins. In addition, PKB plays an important role in mediating protection against apoptosis by survival factors, such as insulin-like growth factor-1.
Polymerization of olefins through heterogeneous catalysis. XIV. The influence of temperature in the solution copolymerization of ethylene (1993)

Abstract The influence of temperature variation on the kinetics and the polymer properties in the homo‐ and copolymerization of ethylene in a solution reactor is discussed. The Polymerization is conducted in a semibatch mode at 320 Psig total reactor pressure for 10 min polymerization time. Temperature variations in the range 145–200°C in both home‐and copolymerization of ethylene with 1‐octene shows that the highest catalyst yield was obtained at temperature of 165–175°C. At the optimal temperature, a high initial maximum in the rate of ethylene consumption is attained in a few seconds followed by a relatively slow decay when compared with polymerization conducted at higher temperatures. Polymerization at temperatures ≥ 185°C resulted in a lower peak in the consumption rate of ethylene accompanied by a rapid decay with time. In the case of ethylene/1‐Octene copolymerization, a rather low comonomer incorporation level is obtained at the conditions employed; the 1‐octene incorporated was only 0.2–0.7 mol %. Higher M w values, of about 350,000 at 145°C, are obtained in homopolymerization in comparison to M w values obtained in copolymerization, of about 195,000 at the same temperature. Over the temperature range of 145–200°C, both M w and M n values vary by about 40%. © 1993 John Wiley & Sons, Inc.
Surface modification of carbon black by vegetable oil—Its effect on the rheometric, hardness, abrasion, rebound resilience, tensile, tear, and adhesion properties (2002)

Abstract Plasticizer (vegetable or parafinic oil) pretreated carbon black is mixed with rubber for its compounding. It is observed that the extent of cure obtained from rheometric torque decreases linearly with an increase in vegetable oil content. The presence of a coupling action and a monolayer (microplasticization) of vegetable oil at carbon black–rubber interfaces causes a decrease in tan δ (from rheometric studies), elongation at break, and tensile strength, and increase in abrasion loss, hardness, and 300% modulus up to 3 phr, beyond which all the properties show just the opposite trend with an increase in the content of vegetable oil. Both tear strength and rebound resilience increases with increasing doses of vegetable oil; the rate of increase is slow up to 3 phr due to the coupling action and microplasticization, and it is faster beyond 3 phr due to the presence of both coupling and plasticising action. Upon the addition of a plasticizer, adhesive strength increases up to 1 phr in the case of vegetable oil, and remains almost constant in the case of parafinic oil; beyond 1 phr, adhesive strength decreases due to the presence of a multiple layer of plasticizer between rubber–metal interfaces. © 2002 Wiley Periodicals, Inc. J Appl Polym Sci 84: 256–260, 2002; DOI 10.1002/app.10320
Dose enhancement from backscattered radiation at tissue–metal interfaces irradiated with high energy electrons (1980)

Irradiation of a tissue-metal interface with 13 MeV to 20 MeV electrons results in an increased dose to the tissue on the entrance side of the metal. Ionization measurements were made with a thin-window parallel-plate chamber to determine the magnitude of the dose enhancement as a function of incident electron energy, thickness and atomic number of metals introduced into the electron beam. The presence of a metal resulted in a dose ranging from 6% to approximately 50% greater than that measured with no metal in the beam. Most of this increase in dose may be eliminated by the addition of 1-2 g/cm2 of low Z material between tissue and metal.
When rejuvenation is a problem: challenges of modeling late-onset neurodegenerative disease (2015)

In contrast to the successful modeling of early-onset disorders using patient-specific cells, modeling of late-onset neurodegenerative diseases such as Parkinson's disease remains a challenge. This might be related to the often ignored fact that current induced pluripotent stem cell (iPSC) differentiation protocols yield cells that typically show the behavior of fetal stage cells. Acknowledging aging as a contributing factor in late-onset neurodegenerative disorders represents an important step on the road towards faithfully recreating these diseases in vitro. Here, we summarize progress in the field and review the strategies and challenges for triggering late-onset disease phenotypes.
A 4-GS/s 39.9-dB SNDR 11.7-mW Hybrid Voltage-Time Two-Step ADC With Feedforward Ring Oscillator-Based TDCs (2020)

A power and area efficient two-step hybrid voltage-time ADC achieves a 4-GS/s conversion speed and 39.9-dB SNDR in 28-nm CMOS. Two pipelined time-based converters (TBCs) with a thermometer capacitive DAC (CDAC) in the ADC lead to a high-speed and low-power operation. The pipelined architecture splits the full ADC resolution, thus relaxing the TBC complexity. The TBC consists of a voltage-domain comparator, a current-source-based voltage-to-time converter (VTC), and a ring oscillator (RO)-based time-to-digital converter (TDC) with feedforward and 2× interpolation that achieves high conversion speed and good linearity simultaneously. The prototype ADC is fabricated in a standard 28-nm CMOS process with an active area of only 0.017mm <sup xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">2</sup> . The measured SNDR and SFDR are 39.9 and 47.8 dB with a Nyquist input at 4 GS/s. The FoM <sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">W</sub> and FoM <sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">S</sub> are 39.3 fJ/conv-step and 152.2 dB, respectively.
Synovial Cells Responding to a 65‐kDa Mycobacterial Heat Shock Protein have a High Proportion of a TcRγδ Subtype Uncommon in Peripheral Blood (1990)

We have analysed the ability of T cells from synovial fluid mononuclear cells (SFMC) and from peripheral blood mononuclear cells (PBMC) of inflammatory arthritic diseases to proliferate in response to mycobacterial antigens (65-kDa heat shock protein [hsp] of BCG, whole BCG) and to rat collagen type II. The SFMC demonstrated a significantly greater ability to respond to 65-kDa hsp of BCG, and to whole BCG, compared with PBMC from the same patients. With collagen type II, only a small proportion of the patients showed a proliferative response, although with this antigen also SFMC responded better than PBMC. There was no difference between SFMC and PBMC in the response to control antigen (tetanus toxoid), phytohaemagglutinin (PHA), or interleukin 2 (IL-2). A high proportion of cells in SFMC-derived short-term T-cell lines were of TcR gamma delta type, often exceeding the number of TcR gamma beta type. There was a significantly higher proportion of TcR gamma delta cells in the SFMC lines compared with the PBMC lines, and a large part of the TcR gamma delta cells in the SFMC cultures was CD8+. The SFMC lines had a high proportion of delta-TCS-1+ cells (V delta 1) among their TcR gamma delta cells, always exceeding the percentages of Ti gamma A+(V gamma 9) and BB3+ (V delta 2). In the PBMC lines, the distribution of TcR gamma delta subtypes was markedly different, with a Ti gamma A+/BB3+ population in the majority. These data argue for a different subpopulation distribution of TcR gamma delta cells in synovial fluid compared with peripheral blood of patients with inflammatory arthritic diseases.
Collagen Type III and VI Turnover in Response to Long-Term Immobilization (2015)

The Pro-C3 and-C6 biomarkers change likely reflect remodeling changes in response to unloading or reloading, whereas C6M does not appear to respond to unloading. Pro-C3 and C6M levels correlate with LBM at baseline, while Pro-C6 is related to the anabolic and catabolic responses to unloading and reloading.
Structure-Binding Relationships for the Interaction between a Vancomycin Monoclonal Antibody Fab Fragment and a Library of Vancomycin Analogues and Tracers (1999)

A series of vancomycin analogues and tracers were synthesized, and their binding interactions with an anti-vancomycin Fab fragment were evaluated under mass transport limiting conditions using surface plasmon resonance detection. Differences observed in binding interactions were utilized to define the vancomycin structural elements critical for antibody recognition. Major structural regions of vancomycin shown to play an important role in anti-vancomycin Fab fragment recognition include two sugar moieties and one chlorinated phenyl ring. The N-methylleucyl residue, the carboxy terminal residue, and residues in the peptide-binding region of vancomycin have minimal impact on the anti-vancomycin Fab fragment/vancomycin binding interaction. The selection of an antibody with such binding properties plays a critical role in the development of a vancomycin immunoassay that employs stable calibrators and controls.