gebhart/patrepeval huggingface dataset:
Solution Properties of Polymers Containing Zwitterionic Moieties in Side Chains (1994)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTSolution Properties of Polymers Containing Zwitterionic Moieties in Side ChainsC. Konak, R. C. Rathi, P. Kopeckova, and J. KopecekCite this: Macromolecules 1994, 27, 8, 1992–1996Publication Date (Print):April 1, 1994Publication History Published online1 May 2002Published inissue 1 April 1994https://pubs.acs.org/doi/10.1021/ma00086a002https://doi.org/10.1021/ma00086a002research-articleACS PublicationsRequest reuse permissionsArticle Views259Altmetric-Citations20LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose Get e-Alerts
PRINCIPLES OF KNITTING (1954)

The development of the modern knitting machine from that invented by William Lee in 1589 is outlined. The principles of the knitting action of the four main types of machine are very briefly described, stress being laid on the controlling features governing the actual length of the knitted loop.
Intrauterine nutrition: its importance during critical periods for cardiovascular and endocrine development (1999)

Experimental investigations in animals have highlighted the role of early reduced calorie and protein nutrition on fetal cardiovascular development, and the occurrence of a transition from a low fetal arterial blood pressure in late gestation to a high arterial blood pressure postnatally. These observations may explain the correlation between health, including appropriate nutrition, in pregnant women and the outcome of their pregnancies. Emphasis has been placed on low birth weight infants who have an increased risk of developing cardiovascular diseases, including hypertension, coronary heart disease and stroke in adulthood. Vascular pathology in adults is not always associated with low birth weight and animal experiments indicate that substantial changes in cardiovascular and endocrine function can result from maternal or fetal undernutrition without impairing fetal growth. Experimental investigation on organogenesis shows the pivotal role of adequate protein availability as well as total caloric intake. Amino acid metabolism in the feto-maternal unit appears to have a key influence on the development of organs involved in chronic degenerative disease in the adult. Experimental investigation has also highlighted the role of carbohydrate metabolism and its effect on the fetus in this respect. Either restriction of protein intake or diabetes in pregnant rats has intergenerational effects at least on the endocrine pancreas and the brain. Further investigation is needed to clarify the mechanisms involved and lead to a new understanding of the importance of nutrition during pregnancy. This will provide an important approach to the primary prevention of diabetes and chronic degenerative diseases.
Hypothermia in bleeding trauma: a friend or a foe? (2009)

The induction of hypothermia for cellular protection is well established in several clinical settings. Its role in trauma patients, however, is controversial. This review discusses the benefits and complications of induced hypothermia--emphasizing the current state of knowledge and potential applications in bleeding patients. Extensive pre-clinical data suggest that in advanced stages of shock, rapid cooling can protect cells during ischemia and reperfusion, decrease organ damage, and improve survival. Yet hypothermia is a double edged sword; unless carefully managed, its induction can be associated with a number of complications. Appropriate patient selection requires a thorough understanding of the pre-clinical literature. Clinicians must also appreciate the enormous influence that temperature modulation exerts on various cellular mechanisms. This manuscript aims to provide a balanced view of the published literature on this topic. While many of the advantageous molecular and physiological effects of induced hypothermia have been outlined in animal models, rigorous clinical investigations are needed to translate these promising findings into clinical practice.
Purification of proteins similar to HPr and enzyme I from the oral bacterium <i>Streptococcus salivarius</i>. Biochemical and immunochemical properties (1983)

The phosphoenolpyruvate:sugar phosphotransferase system (PTS) is made of several proteins. Two of them are designated general proteins because they are required for the transport and phosphorylation of all sugars of the PTS. These two proteins are found in the soluble fraction of cellular extracts and are termed HPr and enzyme I (EI). We reported in this work the purification and the characterization of these two proteins from Streptococcus salivarius ATCC 25975. HPr was purified by DEAE-cellulose chromatography, molecular sieving on Ultrogel AcA44, and carboxymethylcellulose chromatography. Sodium dodecyl sulfate electrophoresis in the presence of urea revealed a single band with a molecular weight of 6700. The protein contained no tryptophan and had a pI of 4.8. The purification scheme of EI was as follows: DEAE-cellulose chromatography, hydroxylapatite chromatography, DEAE-Sephadex A-50 chromatography, preparative electrophoresis, and molecular sieving on Ultrogel AcA34. The five-step purification for EI produced a 199-fold purified preparation with a specific activity of 530 mumol of HPr phosphorylated per minute per milligram of protein at 37 degrees C. The fraction obtained after filtration on Ultrogel AcA34 gave one band (68 000) on sodium dodecyl sulfate - polyacrylamide gel electrophoresis. The molecular weight of the native enzyme determined by gel filtration at 4 degrees C was 135 000, suggesting that it was a dimer. Enzyme I had a pI of 4.2, a pH optimum of 6.7, a Km for HPr of about 27 microM, a Km for phosphoenolpyruvate of 0.48 mM, and kinetics that were consistent with a Ping-Pong mechanism. Evidence had been obtained which indicated that S. salivarius enzyme I was antigenically very similar to enzyme I from various strains of Streptococcus mutans, but not to the enzyme from Bacillus subtilis, Staphylococcus aureus, Streptococcus faecalis, and Escherichia coli.
Cyclodextrin sidechain polyesters — synthesis and inclusion of adamantan derivatives (1996)

Abstract An efficient synthesis of a cyclodextrin polymer by a polymer‐analogous reaction of lithium β‐cyclodextrinate with poly[( N ‐vinyl‐2‐pyrrolidinone)‐ co ‐(maleic anhydride)] is described. Because cyclodextrin polymer is highly water‐soluble, its binding of guests, like 1‐adamantanamine and l‐adamantanecarboxylic acid, could be investigated by titration microcalorimetry. All cyclodextrin moieties are accessible by the guest within the polymer, but binding constants are slightly lower than those for native β‐cyclodextrin. Binding constants are influenced by Coulomb interactions between the guest and the anionic polymer backbone.
An amyloid inhibitor octapeptide forms amyloid type fibrous aggregates and affects microtubule motility (2014)

An amyloid inhibitor octapeptide simultaneously forms amyloid type fibrous aggregates on its own and interacts with the microtubule lattice three times stronger than a Xenopus Microtubule Associated Protein (XMAP215).
MECHANISMS UNDERLYING EXPRESSION OF TN<i>10</i> ENCODED TETRACYCLINE RESISTANCE (1994)

Tetracycline-resistance determinants encoding active efflux of the drug are widely distributed in gram-negative bacteria and unique with respect to genetic organization and regulation of expression. Each determinant consists of two genes called tetA and tetR, which are oriented with divergent polarity, and between them is a central regulatory region with overlapping promoters and operators. The amino acid sequences of the encoded proteins are 43-78% identical. The resistance protein TetA is a tetracycline/metal-proton antiporter located in the cytoplasmic membrane, while the regulatory protein TetR is a tetracycline inducible repressor. TetR binds via a helix-turn-helix motif to the two tet operators, resulting in repression of both genes. A detailed model of the repressor-operator complex has been proposed on the basis of biochemical and genetic data. The tet genes are differentially regulated so that repressor synthesis can occur before the resistance protein is expressed. This has been demonstrated for the Tn10-encoded tet genes and may be a common property of all tet determinants, as suggested by the similar locations of operators with respect to promoters. Induction is mediated by a tetracycline-metal complex and requires only nanomolar concentrations of the drug. This is the most sensitive effector-inducible system of transcriptional regulation known to date. The crystal structure of the TetR-tetracycline/metal complex shows the Tet repressor in the induced, non-DNA binding conformation. The structural interpretation of many noninducible TetR mutants has offered insight into the conformational changes associated with the switch between inducing and repressing structures of TetR. Tc is buried in the core of TetR, where it is held in place by multiple contacts to the protein.
Assessment of Clinical Activity of PD-1 Checkpoint Inhibitor Combination Therapies Reported in Clinical Trials (2020)

In this cross-sectional study, most combination trials showed the expected benefit of combining 2 active anticancer agents, but few combination trials showed clinical synergy according to the Bliss independent activity model.
SARS-CoV-2 immune evasion by variant B.1.427/B.1.429 (2021)

SARS-CoV-2 entry is mediated by the spike (S) glycoprotein which contains the receptor-binding domain (RBD) and the N-terminal domain (NTD) as the two main targets of neutralizing antibodies (Abs). A novel variant of concern (VOC) named CAL.20C (B.1.427/B.1.429) was originally detected in California and is currently spreading throughout the US and 29 additional countries. It is unclear whether antibody responses to SARS-CoV-2 infection or to the prototypic Wuhan-1 isolate-based vaccines will be impacted by the three B.1.427/B.1.429 S mutations: S13I, W152C and L452R. Here, we assessed neutralizing Ab responses following natural infection or mRNA vaccination using pseudoviruses expressing the wildtype or the B.1.427/B.1.429 S protein. Plasma from vaccinated or convalescent individuals exhibited neutralizing titers, which were reduced 3-6 fold against the B.1.427/B.1.429 variant relative to wildtype pseudoviruses. The RBD L452R mutation reduced or abolished neutralizing activity of 14 out of 35 RBD-specific monoclonal antibodies (mAbs), including three clinical-stage mAbs. Furthermore, we observed a complete loss of B.1.427/B.1.429 neutralization for a panel of mAbs targeting the N-terminal domain due to a large structural rearrangement of the NTD antigenic supersite involving an S13I-mediated shift of the signal peptide cleavage site. These data warrant closer monitoring of signal peptide variants and their involvement in immune evasion and show that Abs directed to the NTD impose a selection pressure driving SARS-CoV-2 viral evolution through conventional and unconventional escape mechanisms.
Visible-Light-Induced Water Splitting Based on Two-Step Photoexcitation between Dye-Sensitized Layered Niobate and Tungsten Oxide Photocatalysts in the Presence of a Triiodide/Iodide Shuttle Redox Mediator (2013)

Water splitting into H2 and O2 under visible light was achieved using simple organic dyes such as coumarin and carbazole as photosensitizers on an n-type semiconductor for H2 evolution, a tungsten(VI) oxide (WO3) photocatalyst for O2 evolution, and a triiodide/iodide (I3(-)/I(-)) redox couple as a shuttle electron mediator between them. The results on electrochemical measurements revealed that the oxidized states of the dye molecules having an oligothiophene moiety (two or more thiophene rings) in their structures are relatively stable even in water and possess sufficiently long lifetimes to exhibit reversible oxidation-reduction cycles, while the carbazole system required more thiophene rings than the coumarin one to be substantially stabilized. The long lifetimes of the oxidized states enabled these dye molecules to be regenerated to the original states by accepting an electron from the I(-) electron donor even in an aqueous solution, achieving sustained H2 and I3(-) production from an aqueous KI solution under visible light irradiation when they were combined with an appropriate n-type semiconductor, ion-exchangeable layered niobate H4Nb6O17. The use of H4Nb6O17 loaded with Pt cocatalyst inside the interlayer allowed the water reduction to proceed preferentially with a steady rate even in the presence of a considerable amount of I3(-) in the solution, due to the inhibited access of I3(-) to the reduction site, Pt particles inside, by the electrostatic repulsion between the I3(-) anions and the negatively charged (Nb6O17)(4-) layers. It was also revealed that the WO3 particles coloaded with Pt and IrO2 catalysts exhibited higher rates of O2 evolution than the WO3 particles loaded only with Pt in aqueous solutions containing a considerable amount of I(-), which competitively consumes the holes and lowers the rate of O2 evolution on WO3 photocatalysts. The enhanced O2 evolution is certainly due to the improved selectivity of holes toward water oxidation on IrO2 cocatalyst, instead of undesirable oxidation of I(-). Simultaneous evolution of H2 and O2 under visible light was then achieved by combining the Pt/H4Nb6O17 semiconductor sensitized with the dye molecules having an oligothiophene moiety, which can stably generate H2 and I3(-) from an aqueous KI solution, with the IrO2-Pt-loaded WO3 photocatalyst that can reduce the I3(-) back to I(-) and oxidize water to O2.
Noncontact, low‐frequency ultrasound as an effective therapy against <i><scp>P</scp>seudomonas aeruginosa</i>–infected biofilm wounds (2013)

Bacterial biofilms, a critical chronic wound mediator, remain difficult to treat. Energy-based devices may potentially improve healing, but with no evidence of efficacy against biofilms. This study evaluates noncontact, low-frequency ultrasound (NLFU) in the treatment of biofilm-infected wounds. Six-millimeter dermal punch wounds in rabbit ears were inoculated with 10(7) colony-forming units of Pseudomonas aeruginosa or left as sterile controls. A biofilm was established in vivo using our published model. NLFU treatment was carried out every other day or every day, with contralateral ear wounds acting as internal, untreated controls. Wounds were harvested for several quantitative endpoints and scanning electron microscopy to evaluate the biofilm structure. The P. aeruginosa biofilm consistently impaired wound epithelialization and granulation. NLFU, both every other day and every day, improved healing and reduced bacterial counts relative to untreated controls (p < 0.05). Scanning electron microscopy confirmed a qualitative decrease in bacteria after both treatments. NLFU also reduced inflammatory cytokine expression (p < 0.05). Our study suggests that NLFU is an effective therapy against P. aeruginosa wound biofilm. This represents the first in vivo evidence of energy-based modalities' impact on wound biofilm, setting the foundation for future mechanistic studies. Continued wound care technology research is essential to improving our understanding, and treatment, of biofilm-infected chronic wounds.
Complete regression of human B-cell lymphoma xenografts in mice treated with recombinant anti-CD22 immunotoxin RFB4(dsFv)-PE38 at doses tolerated by cynomolgus monkeys This article is a US Government work and, as such, is in the public domain in the United States of America. (1999)

RFB4(dsFv)-PE38 is a recombinant immunotoxin in which the variable light domain (VL) is disulfide bonded via cysteine residues to the variable heavy domain (VH), which in turn is fused to PE38, a mutant form of Pseudomonas exotoxin A. RFB4 binds to CD22, which is a differentiation antigen expressed on the majority of B-cell leukemias and lymphomas. To examine the potential efficacy of RFB4(dsFv)-PE38 when administered at a dose schedule appropriate for phase I testing, mice bearing CA46 human CD22+ Burkitt's lymphoma xenografts were treated on alternate days i.v. for 3 doses (QOD ×3). Complete regressions were observed in 80% and 100% of mice treated with 200 and 275 μg/kg QOD ×3, respectively. The higher dose was 27% of the LD50 and 34% of the LD10 in mice. Because RFB4(dsFv)-PE38 is stable at 37°C, it could also be given by continuous infusion using pumps placed in the peritoneal cavity; complete regressions also resulted from this mode of administration. To study toxicology, a pilot toxicology study of RFB4(dsFv)-PE38 was undertaken in cynomolgus monkeys, which like humans but unlike mice have CD22, which binds RFB4. Doses of 100 and 500 μg/kg i.v. QOD ×3 were well tolerated, indicating that a dose that cured tumors in mice was tolerated by primates. Based on these preclinical results, RFB4(dsFv)-PE38 is being developed for the treatment of patients with CD22-positive leukemias and lymphomas. Int. J. Cancer 81:148–155, 1999. © 1999 Wiley-Liss, Inc.
The Renin-Angiotensin System as a Risk Factor and Therapeutic Target for Cardiovascular and Renal Disease (2002)

The renin-angiotensin system (RAS) plays an important homeostatic role in BP regulation, water and salt balance, and tissue growth control under physiologic conditions. On the other hand, a pivotal involvement of the RAS in the pathophysiology of cardiovascular and renal disease is extensively supported by both basic and clinical evidence. In particular, it is today recognized that angiotensin II (AngII), the biologic effector of the RAS, may prompt a number of relevant structural and functional abnormalities through the activation of a complex of cellular effects mostly mediated via its binding with the AT(1) subtype receptors. The key role of these AngII-linked mechanisms of disease is strongly corroborated by large interventional studies. In fact, pharmacologic interference with RAS activity, by both preventing AngII formation with angiotensin-converting enzyme inhibitors or antagonizing its binding to cell membrane receptors by selective antagonists, is associated with highly beneficial outcomes in major disease conditions (hypertension, diabetes, renal failure, heart failure, myocardial infarction, stroke, and others). This article briefly reviews the current views on the biologic organization of RAS evidence supporting a pathogenic role of the RAS activity in promoting cardiac, vascular, and renal disease, and finally provides the basis for considering inhibition of RAS activity a major target for therapeutic interventions in these conditions.
Distance estimation for marine vehicles using a monocular video camera (2016)

Distance estimation for marine vessels is of vital importance to unmanned ship vehicles (USVs) for navigation and collision prevention. This can be achieved by means such as radar or laser sighting. However, due to constraints of the USV, it may be desired to estimate distance using a monocular camera. In this paper, we propose a method that, given a video of a marine vehicle in a maritime environment and a tracker, estimates the distance of the tracked vehicle from the camera. The method detects the horizon and uses its distance as a reference. It detects the contact point of the vehicle with the sea surface by finding a maximally stable extremal region (MSER). Then, it relies on geometries of the earth and on optical properties of the camera to compute the distance. The method was tested on video footage of several sea maneuvers with an average error of 7.1%.
CD27 is heterogeneously expressed in multiple myeloma: low CD27 expression in patients with high‐risk disease (2003)

Expression of CD27 on malignant plasma cells (PC) (CD138+CD38++) was analysed in a cross-sectional study of bone marrow (BM) samples from multiple myeloma (MM) patients (n = 28), monoclonal gammopathy of undetermined significance (MGUS) patients (n = 6) and BM PC from healthy donors (n = 4). MM PC expressed CD27 with a variable, lower intensity pattern compared with the consistent high expression in MGUS and healthy donors. MM patients in complete clinical remission displayed a higher percentage of CD27+ PC compared with patients at diagnosis, relapse or in partial remission. In MM, loss of CD27 correlated with loss of CD19 (R2 = 0.4, P < 0.0001). Human MM cell lines (n = 9) did not express CD27 whereas de novo plasma cell leukaemia (PCL) (n = 3) had a high expression. Re-analysis of a cDNA microarray data set, generated from newly diagnosed MM patients (n = 74), demonstrated that the MM subgroup with the highest prevalence of poor prognostic factors had the lowest CD27 mRNA expression. Fluorescence-activated cell sorting and allele-specific oligonucleotide polymerase chain reaction showed that both CD27+ and CD27- PC subpopulations in MM can belong to the clonal disorder. In conclusion, CD27 is heterogeneously expressed on MM PC and loss of CD27 expression might have prognostic value in MM.
On the amplitude- and frequency-modulation decomposition of signals (1996)

In general, the problem of determining the amplitude and frequency modulations (AM and FM) of a signal is ill posed because there is an unlimited number of combinations of AM and FM that will generate a given signal. Although Gabor proposed a method for uniquely defining the AM and FM of a signal, namely via the analytic signal, the results obtained are sometimes physically paradoxical. In this paper, four reasonable physical conditions that the calculated AM and FM of a signal should satisfy are proposed. The analytic signal method generally fails to satisfy two of the four conditions. A method utilizing the positive (Cohen–Posch) time-frequency distribution and time-varying coherent demodulation of the signal is given for obtaining an AM and FM that satisfy the four proposed conditions. Contrary to the accepted definition, the instantaneous frequency (i.e., the FM) that satisfies these conditions is generally not the derivative of the phase of the signal. Rather, the phase is separated into two parts, one which gives the instantaneous frequency via differentiation, and the other which can be interpreted either as phase modulation or quadrature amplitude modulation of the signal. Examples are given for synthetic signals and speech, with comparisons to the analytic signal method.
Contrôle de congestion dans les protocoles de transport internet. Etat de l'art et perspectives (2004)

Congestion control is an active research field and numerous experimental protocols have been proposed. This paper presents a panorama of various congestion avoidance and control techniques developed for unicast internet transport protocols. We summarize the congestion control in TCP. Next, we present a synthesis of improvements relating to acknowledgments management in one hand, and congestion window size regulation in the other hand. Then, we summarize main works on congestion-window-less protocols, and the impact on transport protocol of routers information. Perspectives and concluding remarks end the paper.