gebhart/patrepeval huggingface dataset:
A Robust Deep Model for Improved Classification of AD/MCI Patients (2020)

Accurate classification of Alzheimer’s Disease (AD) and its prodromal stage, Mild Cognitive Impairment (MCI), plays a critical role in possibly preventing progression of memory impairment and improving quality of life for AD patients. Among many research tasks, it is of particular interest to identify noninvasive imaging biomarkers for AD diagnosis. In this paper, we present a robust deep learning system to identify different progression stages of AD patients based on MRI and PET scans. We utilized the dropout technique to improve classical deep learning by preventing its weight co-adaptation, which is a typical cause of over-fitting in deep learning. In addition, we incorporated stability selection, an adaptive learning factor, and a multi-task learning strategy into the deep learning framework. We applied the proposed method to the ADNI data set and conducted experiments for AD and MCI conversion diagnosis. Experimental results showed that the dropout technique is very effective in AD diagnosis, improving the classification accuracies by 5.9% on average as compared to the classical deep learning methods.
Lipid Pathway Alterations in Parkinson's Disease Primary Visual Cortex (2011)

The data indicate that changes in lipid metabolism occur in the Parkinson's disease visual cortex in the absence of obvious pathology. This suggests that normalization of lipid metabolism and/or oxidative stress status in the visual cortex may represent a novel route for treatment of non-motor symptoms, such as visual hallucinations, that are experienced by a majority of Parkinson's disease patients.
VON RECKLINGHAUSEN NEUROFIBROMATOSIS (1988)

A population-based study in south-east Wales (population 668,100) identified 135 patients with von Recklinghausen neurofibromatosis (prevalence 20/10(5]. In addition to multiple café-au-lait spots and/or dermal neurofibromas, freckling was present in the axilla (67%), groin (44%) or submammary areas (29% of adult females). Although not a criterion for diagnosis, Lisch nodules were almost invariably present in the iris (93% of patients overall; 96% of those aged greater than or equal to 20 yrs). The complications of von Recklinghausen neurofibromatosis in this cohort (n = 135 unless stated) were plexiform neurofibromas (40/125), severe mental retardation (1), epilepsy (6), optic glioma (2), spinal neurofibroma (2), aqueduct stenosis (2), meningioangiomatosis (1), scoliosis requiring surgery (6), pseudoarthrosis (3), delayed puberty (2), visceral and endocrine tumours (6), and congenital glaucoma (1). There were no cases of acoustic neuroma. Considering all living family members aged greater than or equal to 18 yrs, together with their deceased relatives, the frequency of CNS and malignant tumours related to the disease was 4.4-5.2%. Uncomplicated von Recklinghausen neurofibromatosis is disfiguring but not a major cause of morbidity. The management of the disease relates to its complications which can be divided into three categories: those which occur in childhood and cause lifelong morbidity (moderate-severe mental handicap, facial plexiform neurofibromas, orthopaedic), those which can occur at any time but are 'treatable' (benign disorders of the nervous system, visceral and endocrine tumours, renal artery stenosis), and malignant or CNS tumours. The combined frequency for each category based on this survey was 12%, 16% and 4.4-5.2%, respectively.
Intertissue Control of the Nucleolus via a Myokine-Dependent Longevity Pathway (2014)

Recent evidence indicates that skeletal muscle influences systemic aging, but little is known about the signaling pathways and muscle-released cytokines (myokines) responsible for this intertissue communication. Here, we show that muscle-specific overexpression of the transcription factor Mnt decreases age-related climbing defects and extends lifespan in Drosophila. Mnt overexpression in muscle autonomously decreases the expression of nucleolar components and systemically decreases rRNA levels and the size of the nucleolus in adipocytes. This nonautonomous control of the nucleolus, a regulator of ribosome biogenesis and lifespan, relies on Myoglianin, a myokine induced by Mnt and orthologous to human GDF11 and Myostatin. Myoglianin overexpression in muscle extends lifespan and decreases nucleolar size in adipocytes by activating p38 mitogen-activated protein kinase (MAPK), whereas Myoglianin RNAi in muscle has converse effects. Altogether, these findings highlight a key role for myokine signaling in the integration of signaling events in muscle and distant tissues during aging.
Anti-Herpesvirus Activities and Cytotoxicities of 2-Thiopyrimidine Nucleoside Analogues <i>in Vitro</i> (1999)

Twenty 2-thiopyrimidine nucleoside analogues were synthesized and examined for inhibitory activity against herpes simplex virus (HSV) type 1 and 2, varicella-zoster virus (VZV), human cytomegalovirus (HCMV) and thymidine kinase-deficient HSV (HSV-TK-) replication in vitro. 2-thiouracil (thymine) arabinoside, 2'-deoxy-2-thiouridine (or 2-thiothymidine) and their 5-halogenated derivatives showed anti-HSV activity in both RPM18226 (human B-lymphoblastoid cells) and MRC-5 (human embryo lung cells). 2'-deoxy-5-halogenated-2-thiocytidines were also inhibitory against HSV, whereas 2-thiocytosine arabinoside and its derivatives were not inhibitory against HSV replication, except 5-bromo and 5-iodo congeners (TN-31, TN-32). Substitution of the halogen atom at the 5-position of the pyrimidine rings to an atom with a higher molecular weight increased anti-HSV and VZV activities, except for the anti-HSV activity of 2-thiouracil arabinosides. 2'-deoxy-5-methyl-, and 2'-deoxy-5-iodo-2-thiouridines (TN-17, TN-44) showed the most potent anti-HSV activity, and 2'-deoxy-5-chloro- and 2'-deoxy-5-bromo-2-thiocytidines were potent inhibitors of VZV replication. However, none of the compounds inhibited HCMV and HSV-TK- replication. TN-31 and TN-32 were shown to inhibited HCMV and HSV-TK- as well as HSV and VZV replication. The cytotoxicity of the 2-thio-pyrimidine nucleoside analogues was less than that of the 2-oxy-congeners of the compounds (5-iodo-2'-deoxyuridine, 5-iodo-2'-deoxycytidine, thymine arabinoside and cytosine arabinoside). The selectivity index of 2'-deoxy-5-iodo-2-thiouridine (TN-44) was higher than that of 5-iodo-deoxyuridine. TN-17 and TN-44 were not cytotoxic to resting or stimulated human peripheral blood mononuclear cells at 400 microM, although TN-32 was cytotoxic at a concentration of 20 microM.
Heparin-Modified Small-Diameter Nanofibrous Vascular Grafts (2012)

Due to high incidence of vascular bypass procedures, an unmet need for suitable vessel replacements exists, especially for small-diameter vascular grafts. Here we produced 1-mm diameter vascular grafts with nanofibrous structure via electrospinning, and successfully modified the nanofibers by the conjugation of heparin using di-amino-poly(ethylene glycol) (PEG) as a linker. Antithrombogenic activity of these heparin-modified scaffolds was confirmed in vitro. After 1 month implantation using a rat common carotid artery bypass model, heparin-modified grafts exhibited 85.7% patency, versus 57.1% patency of PEGylated grafts and 42.9% patency of untreated grafts. Post-explant analysis of patent grafts showed complete endothelialization of the lumen and neovascularization around the graft. Smooth muscle cells were found in the surrounding neo-tissue. In addition, greater cell infiltration was observed in heparin-modified grafts. These findings suggest heparin modification may play multiple roles in the function and remodeling of nanofibrous vascular grafts, by preventing thrombosis and maintaining patency, and by promoting cell infiltration into the three-dimensional nanofibrous structure for remodeling.
Sodium Hypochlorite and Sodium Bromide Individualized and Stabilized Carbon Nanotubes in Water (2017)

Aggregation is a major problem for hydrophobic carbon nanomaterials such as carbon nanotubes (CNTs) in water because it reduces the effective particle concentration, prevents particles from entering the medium, and leads to unstable electronic device performances when a colloidal solution is used. Molecular ligands such as surfactants can help the particles to disperse, but they tend to degrade the electrical properties of CNTs. Therefore, self-dispersed particles without the need for surfactant are highly desirable. We report here, for the first time to our knowledge, that CNT particles with negatively charged hydrophobic/water interfaces can easily self-disperse themselves in water via pretreating the nanotubes with a salt solution with a low concentration of sodium hypochlorite (NaClO) and sodium bromide (NaBr). The obtained aqueous CNT suspensions exhibit stable and superior colloidal performances. A series of pH titration experiments confirmed the presence and role of the electrical double layers on the surface of the salted carbon nanotubes and of functional groups and provided an in-depth understanding of the phenomenon.
Bile acids induce cholera toxin expression in <i>Vibrio cholerae</i> in a ToxT-independent manner (2005)

The production of cholera toxin (CT) during Vibrio cholerae infection results in the hallmark diarrhea that characterizes the disease cholera. The transmembrane protein ToxR was originally identified as a functional transcriptional activator of ctxAB in a heterologous Escherichia coli system. However, direct ToxR activation of the ctxAB promoter in V. cholerae has not been previously demonstrated. Instead, a regulatory cascade has been defined in which the activators ToxRS and TcpPH modulate ctxAB expression by acting in concert to transcriptionally activate another regulator, ToxT. ToxT, in turn, directly activates ctxAB expression as well as expression of the tcp genes and other virulence-associated genes. In this study, we show that ToxRS directly activates ctxAB in a ToxT-independent manner in a classical biotype V. cholerae, and that this activation requires the presence of bile acids. Although the levels of CT induced by this mechanism are lower than levels induced under other in vitro conditions, the bile-dependent conditions described here are more physiologic, being independent of pH and temperature. We further show that the inability of bile acids to stimulate ToxRS-dependent expression of CT in El Tor biotype strains is related to the differences between classical and El Tor ctxAB promoters, which differ in the number of heptad TTTTGAT repeats in their respective upstream regions. The ability of bile acids to stimulate direct activation of ctxAB by ToxRS depends upon the transmembrane domain of ToxR, which may interact with bile acids in the inner membrane of V. cholerae.
Genetic Analyses Reveal Differences in the VP7 and VP4 Antigenic Epitopes between Human Rotaviruses Circulating in Belgium and Rotaviruses in Rotarix and RotaTeq (2011)

Two live-attenuated rotavirus group A (RVA) vaccines, Rotarix (G1P[8]) and RotaTeq (G1-G4, P[8]), have been successfully introduced in many countries worldwide, including Belgium. The parental RVA strains used to generate the vaccines were isolated more than 20 years ago in France (G4 parental strain in RotaTeq) and the United States (all other parental strains). At present, little is known about the relationship between currently circulating human RVAs and the vaccine strains. In this study, we determined sequences for the VP7 and VP4 outer capsid proteins of representative G1P[8], G2P[4], G3P[8], G4P[8], G9P[8], and G12P[8] RVAs circulating in Belgium during 2007 to 2009. The analyses showed that multiple amino acid differences existed between the VP7 and VP4 antigenic epitopes of the vaccine viruses and the Belgian isolates, regardless of their G and P genotypes. However, the highest variability was observed among the circulating G1P[8] RVA strains and the G1 and P[8] components of both RVA vaccines. In particular, RVA strains of the P[8] lineage 4 (OP354-like) showed a significant number of amino acid differences with the P[8] VP4 of both vaccines. In addition, the circulating Belgian G3 RVA strains were found to possibly possess an extra N-linked glycosylation site compared to the G3 RVA vaccine strain of RotaTeq. These results indicate that the antigenic epitopes of RVA strains contained in the vaccines differ substantially from those of the currently circulating RVA strains in Belgium. Over time, these differences might result in selection for strains that escape the RVA neutralizing-antibody pressure induced by vaccines.
Wie die Rechte Sprache prägt Steilvorlagen von Rechtsaußen (2004)

Immer wieder wird mit Blick auf die extreme Rechte in Deutschland angemerkt, dass es dieser zunehmend gelänge, ihre Ideologie ins Zentrum der Gesellschaft zu rücken, wo sie ihre verheerenden Wirkungen entfalten könne. Vielfach wird von einem Rechtsruck in Deutschland gesprochen, wie auch Politiker der Union feststellen.1
A Hold Friendly Flip-Flop For Area Recovery (2007)

In this paper a new family of scan flip-flops is introduced whose scan pin hold characteristic has improved while data pin timing is left intact. This characteristic helps to alleviate scan chain hold problem while meeting the maximum frequency in data path. This solution can reduce the number of buffers inserted in the scan chain to fix hold violations. The new flip-flop can save up to 29% area as compared to the usage of normal flip-flop combined with hold-fixing buffers.
Toy-Smooth laparoscopic hernioplasty. (1991)

The Toy-Smoot laparoscopic hernioplasty was performed in 10 patients with excellent short-term results. This laparoscopic hernioplasty utilizes the principles of high ligation of the sac, a tension-free repair, and the advantages of an expanded PTFE patch over other prosthetic patch materials without groin dissection. The Toy-Smoot laparoscopic hernioplasty is a safe and effective repair of both direct and indirect inguinal hernias. The patients experience only minimal pain and return to full activity by the second postoperative day.
Photoluminescence of CsMI<sub>3</sub>:Eu<sup>2+</sup> (M = Mg, Ca, and Sr) – a spectroscopic probe on structural distortions (2015)

The delicate dependence of the photoluminescence properties of Eu<sup>2+</sup> on the structure of the perovskite-analogue iodides CsMI<sub>3</sub> (M = Mg, Ca, Sr) is discussed.
Sensitivity of Mice to Endotoxin after Vaccination with BCG (Bacillus Calmette-Guerin) (1958)

1. It is shown that a single intravenous injection of BCG in mice induces a state of hyperreactivity to bacterial endotoxin. The LD50 for E. coli lipopolysaccharide is decreased from 357 μg in controls to 6 or 7 μg in BCG vaccinated animals. This change appears around the 5th day after vaccination. 2. Trehalose dimycolate, a component derived from virulent tubercle bacilli induces a similar state of hyperreactivity to endotoxin upon single or repeated injections.
US Manufacturing: Understanding Its Past and Its Potential Future (2014)

The development of the US manufacturing sector over the last half-century displays two striking and somewhat contradictory features: 1) the growth of real output in the US manufacturing sector, measured by real value added, has equaled or exceeded that of total GDP, keeping the manufacturing share of the economy constant in price-adjusted terms; and 2) there is a long-standing decline in the share of total employment attributable to manufacturing. The persistence of these trends seems inconsistent with stories of a recent or sudden crisis in the US manufacturing sector. After all, as recently as 2010, the United States had the world's largest manufacturing sector measured by its valued-added, and while it has now been surpassed by China, the United States remains a very large manufacturer. On the other hand, there are some potential causes for concern. First, though manufacturing's output share of GDP has remained stable over 50 years, and manufacturing retains a reputation as a sector of rapid productivity improvements, this is largely due to the spectacular performance of one subsector of manufacturing: computers and electronics. Second, recently there has been a large drop in the absolute level of manufacturing employment that many find alarming. Third, the US manufacturing sector runs an enormous trade deficit, equaling $460 billion in 2012, which is also very concentrated in trade with Asia. Finally, we consider the future evolution of the manufacturing sector and its importance for the US economy. Many of the largest US corporations continue to shift their production facilities overseas. It is important to understand why the United States is not perceived to be an attractive base for their production.
Age-Dependent Changes in Material Properties of the Brain and Braincase of the Rat (2003)

Clinical and biomechanical evidence indicates that mechanisms and pathology of head injury in infants and young children may be different from those in adults. Biomechanical computer-based modeling, which can be used to provide insight into the thresholds for traumatic tissue injury, requires data on material properties of the brain, skull, and sutures that are specific for the pediatric population. In this study, brain material properties were determined for rats at postnatal days (PND) 13, 17, 43, and 90, and skull/suture composite (braincase) properties were determined at PND 13, 17, and 43. Controlled 1 mm indentation of a force probe into the brain was used to measure naive, non-preconditioned (NPC) and preconditioned (PC) instantaneous (G(i)) and long-term (G( infinity )) shear moduli of brain tissue both in situ and in vitro. Brains at 13 and 17 PND exhibited statistically indistinguishable shear moduli, as did brains at 43 and 90 PND. However, the immature (average of 13 and 17 PND) rat brain (G(i) = 3336 Pa NPC, 1754 Pa PC; G( infinity )= 786 Pa NPC, 626 Pa PC) was significantly stiffer (p < 0.05) than the mature (average of 43 and 90 PND) brains (G(i) = 1721 Pa NPC, 1232 Pa PC; G( infinity ) = 508 Pa NPC, 398 Pa PC). A "reverse engineering" finite element model approach, which simulated the indentation of the force probe into the intact braincase, was used to estimate the effective elastic moduli of the braincase. Although the skull of older rats was significantly thicker than that of the younger rats, there was no significant age-dependent change in the effective elastic modulus of the braincase (average value = 6.3 MPa). Thus, the increase in structural rigidity of the braincase with age (up to 43 PND) was due to an increase in skull thickness rather than stiffening of the tissue. These observations of a stiffer brain and more compliant braincase in the immature rat compared with the adult rat will aid in the development of age-specific experimental models and in computational head injury simulations. Specifically, these results will assist in the selection of forces to induce comparable mechanical stresses, strains and consequent injury profiles in brain tissues of immature and adult animals.
Effects of Increased Ventilatory Drive on Motor Unit Firing Rates in Human Inspiratory Muscles (1999)

This study was designed to determine whether increased neural drive increases firing rates of inspiratory motoneurons uniformly in humans. The discharge of single motor units in the diaphragm, parasternal intercostal and scalene muscles was recorded with monopolar electrodes. Ventilation was increased threefold with an external dead space. The discharge of 516 motor units was sampled in four subjects. All but 4 units increased their discharge rate during inspiration with only 46 discharging tonically during expiration. With increased dead space, discharge frequencies of diaphragmatic motor units increased from 11.0 +/- 2.7 to 17.7 +/- 3.3 Hz (mean +/- SD; p < 0.001). However, firing rates increased for parasternal intercostals from 10.0 +/- 1.6 to only 11.9 +/- 1.9 Hz (p < 0.001), and for scalenes from 8.7 +/- 1.8 to only 9.5 +/- 1.2 Hz (p < 0.05). Proportionate increases in rib cage and abdominal expansion accompanied the increased ventilation with added dead space. These results suggest that previously reported predominant increase in firing rates of diaphragmatic motor units in patients with chronic airflow limitation reflects the normal response of respiratory motor output to increased neural drive. The motoneuron pools of the parasternal intercostals and scalenes may show more prominent recruitment than frequency modulation.
Shear Dependence of Effective Cell Volume as a Determinant of Blood Viscosity (1970)

The viscosity of suspensions of human erythrocytes (normal cells in plasma, normal cells in Ringer's solution containing albumin, and hardened cells in Ringer's solution containing albumin) was measured over a wide range of shear rates, and the macrorheological data were correlated with the microrheological behavior of erythrocytes and rigid particles. The formation of rouleaux increases the effective volume of erythrocytes as a result of (i) the increase in axial ratio and (ii) the limitation of deformation of individual erythrocytes. The effective cell volume is the fundamental determinant of blood viscosity.
Muscle strength in the triceps surae and objectively measured customary walking activity in men and women over 65 years of age (1988)

1. Objective measurements of the maximal voluntary strength of triceps surae and the amount and speed of customary walking have been made in 56 men and 66 women aged over 65 years, who were living independently. 2. Strength was measured using a dynamometer based upon a hydraulic system (Bourdon tube). Walking was assessed, for amount using a mechanical accelerometer (pedometer) over a week, and for speed using a self-paced test for normal walking over 100 m on the level. The reliability and validity of these methods has been described. 3. The men were significantly stronger (1128 +/- 206 vs 873 +/- 177 N) even after adjustment for body weight; their amount of walking was similar to that of women, but they walked significantly faster (4.8 +/- 0.6 vs 4.2 +/- 0.6 km/h). Men were significantly more active in leisure pursuits (as assessed by questionnaire). 4. Significant associations between strength and chosen normal walking speed were found for both sexes (r = 0.41, P less than 0.001 for men and r = 0.36, P less than 0.01 for women). The amount of walking (daily stepscore as a mean from 7 consecutive days recorded) was significantly but less strongly correlated with strength (r = 0.30, P less than 0.05) in the men only. 5. Multiple regression analysis showed that in men neither age nor amount of walking had any further effect in addition to speed, but in women age had an additional effect (multiple R = 0.48). 6. An association has been demonstrated which raises the possibility of reversing loss of muscle strength through increased daily activity.
Decimal floating-point in z9: An implementation and testing perspective (2007)

Although decimal arithmetic is widely used in commercial and financial applications, the related computations are handled in software. As a result, applications that use decimal data may experience performance degradations. Use of the newly defined decimal floating-point (DFP) format instead of binary floating-point is expected to significantly improve the performance of such applications. System z9™ is the first IBM machine to support the DFP instructions. We present an overview of this implementation and provide some measurement of the performance gained using hardware assists. Various tools and techniques employed for the DFP verification on unit, element, and system levels are presented in detail. Several groups within IBM collaborated on the verification of the new DFP facility, using a common reference model to predict DFP results.