gebhart/patrepeval huggingface dataset:
Reinventing Type 2 Diabetes (2008)

Our website uses cookies to enhance your experience. By continuing to use our site, or clicking "Continue," you are agreeing to our Cookie Policy | Continue JAMA HomeNew OnlineCurrent IssueFor Authors Publications JAMA JAMA Network Open JAMA Cardiology JAMA Dermatology JAMA Health Forum JAMA Internal Medicine JAMA Neurology JAMA Oncology JAMA Ophthalmology JAMA Otolaryngology–Head & Neck Surgery JAMA Pediatrics JAMA Psychiatry JAMA Surgery Archives of Neurology & Psychiatry (1919-1959) Podcasts Clinical Reviews Editors' Summary Medical News Author Interviews More JN Learning / CMESubscribeJobsInstitutions / LibrariansReprints & Permissions Terms of Use | Privacy Policy | Accessibility Statement 2023 American Medical Association. All Rights Reserved Search All JAMA JAMA Network Open JAMA Cardiology JAMA Dermatology JAMA Forum Archive JAMA Health Forum JAMA Internal Medicine JAMA Neurology JAMA Oncology JAMA Ophthalmology JAMA Otolaryngology–Head & Neck Surgery JAMA Pediatrics JAMA Psychiatry JAMA Surgery Archives of Neurology & Psychiatry Input Search Term Sign In Individual Sign In Sign inCreate an Account Access through your institution Sign In Purchase Options: Buy this article Rent this article Subscribe to the JAMA journal
Urinary Proteomics for Early Diagnosis in Diabetic Nephropathy (2012)

Diabetic nephropathy (DN) is a progressive kidney disease, a well-known complication of long-standing diabetes. DN is the most frequent reason for dialysis in many Western countries. Early detection may enable development of specific drugs and early initiation of therapy, thereby postponing/preventing the need for renal replacement therapy. We evaluated urinary proteome analysis as a tool for prediction of DN. Capillary electrophoresis-coupled mass spectrometry was used to profile the low-molecular weight proteome in urine. We examined urine samples from a longitudinal cohort of type 1 and 2 diabetic patients (n = 35) using a previously generated chronic kidney disease (CKD) biomarker classifier to assess peptides of collected urines for signs of DN. The application of this classifier to samples of normoalbuminuric subjects up to 5 years prior to development of macroalbuminuria enabled early detection of subsequent progression to macroalbuminuria (area under the curve [AUC] 0.93) compared with urinary albumin routinely used to determine the diagnosis (AUC 0.67). Statistical analysis of each urinary CKD biomarker depicted its regulation with respect to diagnosis of DN over time. Collagen fragments were prominent biomarkers 3-5 years before onset of macroalbuminuria. Before albumin excretion starts to increase, there is a decrease in collagen fragments. Urinary proteomics enables noninvasive assessment of DN risk at an early stage via determination of specific collagen fragments.
Expression of smooth muscle-specific proteins in myoepithelium and stromal myofibroblasts of normal and malignant human breast tissue. (1993)

The expression of several differentiation markers in normal human mammary gland myoepithelium and in certain stromal fibroblasts ("myofibroblasts") associated with breast carcinomas was studied by immunofluorescence microscopy of frozen sections. Several antibodies to smooth muscle-specific proteins (smooth muscle alpha-actin, smooth muscle myosin heavy chains, calponin, alpha 1-integrin, and high molecular weight caldesmon) and to epithelial-specific proteins (cytokeratins, E-cadherin, and desmoplakin) were used to show that myoepithelial cells concomitantly express epithelial and smooth muscle markers whereas adjacent luminal cells express only epithelial markers. The same antibodies were used to establish that stromal myofibroblasts exhibit smooth muscle phenotypic properties characterized by the expression of all the smooth muscle markers examined except for high molecular weight caldesmon. In addition, both myoepithelium and myofibroblasts show a significant degree of heterogeneity in smooth muscle protein expression. Thus, myoepithelial cells and stromal myofibroblasts are epithelial and mesenchymal cells, respectively, which coordinately express a set of smooth muscle markers while maintaining their specific original features. The dual nature of myoepithelial cells and the phenotypic transition of fibroblasts to myofibroblasts are examples of the plasticity of the differentiated cell phenotype.
Distinct modulatory effects of bryostatin 1 and staurosporine on the biosynthesis and expression of the HIV receptor protein (CD4) by T cells. (1991)

A family of structurally related macrocyclic lactones, bryostatins, have recently been shown to display several intriguing pharmacologic properties. Bryostatins are biosynthetic products of bryozoa phyllum of marine animals. To extend the analyses of the biological activities of these highly unusual biosynthetic animal products, we have examined the effect of bryostatin 1 (bryo-1) on the steady-state expression of the human immunodeficiency virus receptor, CD4, by normal peripheral blood T lymphocytes. Incubation of the cells with 5 nM bryo-1 caused a substantial loss of CD4 from the cell surface, as analyzed by flow cytometry using anti-CD4 monoclonal antibody. The modulation of CD4 expression by bryo-1 was not due to a cytotoxicity effect: in the culture conditions where it modulated CD4, bryo-1 also stimulated the expression of the interleukin 2 gene, as indicated by northern blot hybridization. In addition, incubation of the lymphocytes with nanomolar amounts of protein kinase C antagonist, staurosporine, resulted in the inhibition of the bryo-1-induced modulation of CD4 expression. The results of radioimmunoprecipitation analysis of detergent lysates of [35S] methionine-labeled lymphocytes strongly suggest that bryo-1 inhibits the glycosylation and expression of CD4 in a manner similar to that of tunicamycin.
Physicochemical characterization and preliminary in vivo efficacy of bioadhesive, semisolid formulations containing flurbiprofen for the treatment of gingivitis (1999)

In this study, the physicochemical properties and preliminary in vivo clinical performance of formulations containing hydroxyethylcellulose (HEC; 3, 5, 10% w/w), poly(vinylpyrrolidone) (PVP; 3, 5% w/w), polycarbophil (PC; 1, 3, 5% w/w), and flurbiprofen (5% w/w) were examined. Flurbiprofen release into PBS pH 7.4 was performed at 37 degrees C. The mechanical properties (hardness, compressibility, adhesiveness, initial stress) and syringeability of formulations were determined using a texture analyzer in texture profile analysis (TPA) and compression modes, respectively. In general, the time required for release of 10 and 30% of the original mass of flurbiprofen (t10%, t30%) increased as the concentration of each polymeric component increased. However, in the presence of either 5 or 10% HEC and 5% PC, increased PVP concentration decreased both t10%, t30% due to excessive swelling (and disintegration) of these formulations. Increased concentrations of HEC, PVP, and PC significantly increased formulation hardness, compressibility, work of syringe expression, and initial stress due to the effects of these polymers on formulation viscoelasticity. Similarly, increased concentrations of PC (primarily), HEC, and PVP increased formulation adhesiveness due to the known bioadhesive properties of these polymers. Clinical efficacies of formulations containing 3% HEC, 3% PVP, 3% PC, and either 0% (control) or 5% (test) flurbiprofen, selected to offer optimal drug release and mechanical properties, were evaluated and clinically compared in an experimental gingivitis model. The test (flurbiprofen-containing) formulation significantly reduced gingival inflammation, as evaluated using the gingival index, and the gingival crevicular fluid volume, whereas, these clinical parameters were generally increased in volunteers who had received the control formulation. There were no observed differences in the plaque indices of the two subject groups, confirming that the observed differences in gingival inflammation could not be accredited to differences in plaque accumulation. This study has shown both the applicability of the in vitro methods used, particularly TPA, for the rational selection of formulations for clinical evaluation and, additionally, the clinical benefits of the topical application of a bioadhesive semisolid flurbiprofen-containing formulation for the treatment of experimental gingivitis.
Intramolecular Diels-Alder reaction of an isobenzofuran: a convergent synthesis of resistomycin (1982)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTIntramolecular Diels-Alder reaction of an isobenzofuran: a convergent synthesis of resistomycinB. A. Keay and R. RodrigoCite this: J. Am. Chem. Soc. 1982, 104, 17, 4725–4727Publication Date (Print):August 1, 1982Publication History Published online1 May 2002Published inissue 1 August 1982https://pubs.acs.org/doi/10.1021/ja00381a059https://doi.org/10.1021/ja00381a059research-articleACS PublicationsRequest reuse permissionsArticle Views397Altmetric-Citations31LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-AlertscloseSupporting Info (1)»Supporting Information Supporting Information Get e-Alerts
Fimbriation genes of Salmonella enteritidis (1989)

From a cosmid clone, a 5.3-kilobase (kb) HindIII fragment of Salmonella enteritidis DNA containing the fimA gene was subcloned into bacteriophage T7 promoter vectors in both orientations. Predominantly mature fimbrin (14,000 Mr) was produced by clones containing the 5.3-kb insert, whereas the original cosmid clone predominantly accumulated a prefimbrin precursor (16,500 Mr). T7 RNA polymerase-dependent expression of the 5.3-kb insert and of a series of nested deletions revealed several membrane-localized polypeptides (80,000, 40,000, 29,000, 25,000, and 16,500 Mrs) transcribed in the same direction as fimA as well as a single polypeptide (9,000 Mr) transcribed in the opposite direction. Mini-Mu and TnphoA (Tn5 IS50L::phoA) transposon mutagenesis was used to identify a 2- to 3.5-kb region downstream of fimA that affected fimbrin production and processing. A more distant region (greater than 7 kb), revealed by Tn10 and Mu dI mutagenesis, was also required for fimbriation but did not hybridize with the 5.3-kb fragment. Yet another distant region did hybridize to the 5.3-kb fragment, suggesting the existence of other fimbriation-related genes.
Substituted (2-phenoxyphenyl)acetic acids with antiinflammatory activity. 2 (1983)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTSubstituted (2-phenoxyphenyl)acetic acids with antiinflammatory activity. 2David C. Atkinson, Keith E. Godfrey, Peter L. Myers, Nigel C. Phillips, Michael R. Stillings, and Anthony P. WelbournCite this: J. Med. Chem. 1983, 26, 10, 1361–1364Publication Date (Print):October 1, 1983Publication History Published online1 May 2002Published inissue 1 October 1983https://pubs.acs.org/doi/10.1021/jm00364a005https://doi.org/10.1021/jm00364a005research-articleACS PublicationsRequest reuse permissionsArticle Views164Altmetric-Citations6LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose Get e-Alerts
Diversity regularized autoencoders for text generation (2020)

In this paper, we propose a simple yet powerful text generation model, called diversity regularized autoencoders (DRAE). The key novelty of the proposed model lies in its ability to handle various sentence modifications such as insertions, deletions, substitutions, and maskings, and to take them as input. Because the noise-injection strategy enables an encoder to make the latent distribution smooth and continuous, the proposed model can generate more diverse and coherent sentences. Also, we adopt the Wasserstein generative adversarial networks with a gradient penalty to achieve stable adversarial training of the prior distribution. We evaluate the proposed model using quantitative, qualitative, and human evaluations on two public datasets. Experimental results demonstrate that our model using a noise-injection strategy produces more natural and diverse sentences than several baseline models. Furthermore, it is found that our model shows the synergistic effect of grammar correction and paraphrase generation in an unsupervised way.
Mnemonic coding of visual space in the monkey's dorsolateral prefrontal cortex (1989)

1. An oculomotor delayed-response task was used to examine the spatial memory functions of neurons in primate prefrontal cortex. Monkeys were trained to fixate a central spot during a brief presentation (0.5 s) of a peripheral cue and throughout a subsequent delay period (1-6 s), and then, upon the extinction of the fixation target, to make a saccadic eye movement to where the cue had been presented. Cues were usually presented in one of eight different locations separated by 45 degrees. This task thus requires monkeys to direct their gaze to the location of a remembered visual cue, controls the retinal coordinates of the visual cues, controls the monkey's oculomotor behavior during the delay period, and also allows precise measurement of the timing and direction of the relevant behavioral responses. 2. Recordings were obtained from 288 neurons in the prefrontal cortex within and surrounding the principal sulcus (PS) while monkeys performed this task. An additional 31 neurons in the frontal eye fields (FEF) region within and near the anterior bank of the arcuate sulcus were also studied. 3. Of the 288 PS neurons, 170 exhibited task-related activity during at least one phase of this task and, of these, 87 showed significant excitation or inhibition of activity during the delay period relative to activity during the intertrial interval. 4. Delay period activity was classified as directional for 79% of these 87 neurons in that significant responses only occurred following cues located over a certain range of visual field directions and were weak or absent for other cue directions. The remaining 21% were omnidirectional, i.e., showed comparable delay period activity for all visual field locations tested. Directional preferences, or lack thereof, were maintained across different delay intervals (1-6 s). 5. For 50 of the 87 PS neurons, activity during the delay period was significantly elevated above the neuron's spontaneous rate for at least one cue location; for the remaining 37 neurons only inhibitory delay period activity was seen. Nearly all (92%) neurons with excitatory delay period activity were directional and few (8%) were omnidirectional. Most (62%) neurons with purely inhibitory delay period activity were directional, but a substantial minority (38%) was omnidirectional. 6. Fifteen of the neurons with excitatory directional delay period activity also had significant inhibitory delay period activity for other cue directions. These inhibitory responses were usually strongest for, or centered about, cue directions roughly opposite those optimal for excitatory responses.(ABSTRACT TRUNCATED AT 400 WORDS)
Electronic communication in oligonuclear ferrocene complexes with anionic four-coordinate boron bridges (2009)

The di- and trinuclear ferrocene species Li[Fc-BPh(2)-Fc] (Li[]) and Li(2)[Fc-BPh(2)-fc-BPh(2)-Fc] (Li(2)[]) have been investigated with regard to their electrochemical properties and the degree of intervalence charge-transfer after partial oxidation. Li[] shows two distinct one-electron redox waves for its chemically equivalent ferrocenyl substituents in the cyclic voltammogram (E(1/2) = -0.38 V, -0.64 V; vs. FcH/FcH(+)). The corresponding values of Li(2)[] are E(1/2) = -0.45 V (two-electron process) and -1.18 V. All these redox events are reversible at r. t. on the time scale of cyclic voltammetry. X-ray crystallography on the mixed-valent Fe(II)(2)Fe(III) complex Li(12-c-4)(2)[] reveals the centroid-centroid distance between the cyclopentadienyl rings of each of the terminal ferrocenyl substituents (3.329 A) to be significantly smaller than in the central 1,1'-ferrocenediyl fragment (3.420 A). This points towards a charge-localized structure (on the time scale of X-ray crystallography) with the central iron atom being in the Fe(III) state. Mössbauer spectroscopic measurements on Li(12-c-4)(2)[] lend further support to this interpretation. Spectroelectrochemical measurements on Li[] and Li(2)[] in the wavelength range between 300-2800 nm do not show bands interpretable as intervalence charge-transfer absorptions for the mixed-valent states. All data accumulated so far lead to the conclusion that electronic interaction between the individual Fe atoms in Li[] and Li(2)[] occurs via a through-space pathway and/or is electrostatic in nature.
Non-decay type fast-setting calcium phosphate cement: Hydroxyapatite putty containing an increased amount of sodium alginate (1997)

A hydroxyapatite [(HAP) Ca10(PO4)6(OH)2] putty that behaves like a putty or self-curing resin was made by increasing the amount of sodium alginate in non-decay type fast-setting calcium phosphate cement (nd-FSCPC). nd-FSCPC became viscous as the sodium alginate concentration was increased. The best handling properties were obtained when nd-FSCPC contained 8% sodium alginate in its liquid phase. When a 2-kg glass plate was placed on the paste, HAP putty spread to form an area three times that of FSCPC paste. Thus, HAP putty is expected to be easier to use than FSCPC in the filling of bone defects. HAP putty did not decay; in fact, it set within approximately 20 min when immersed in distilled water immediately after mixing. The wet diametral tensile strength value of HAP putty was approximately 12 MPa after 24 h, the same as that for nd-FSCPC containing 0.5% sodium alginate in its liquid phase, or FSCPC that is free from sodium alginate. The elements constituting set HAP putty were examined using powder X-ray diffraction and found to be predominantly apatitic minerals after 24 h. Since the handling properties of a putty or self-curing resin-like cement are very useful in certain surgical procedures, HAP putty made by increasing the sodium alginate concentration in nd-FSCPC is potentially a valuable new biomaterial for use in plastic and reconstructive surgery, as well as oral and maxillofacial surgery.
Apomixis in Sorghum Lines and Their F<sub>1</sub>Progenies (1980)

Sorhum lines and their F1 progenies were observed for characteristics indicating apomixis. Observations of sections and whole mounts of ovaries revealed multiple embryo sacs. Frequencies of multiple embryo sacs of up to four per ovule and 23.3% of ovules with multiple embryo sac indicated potentials for apomixis in five lines of sorghum and in some of their progeny. Progenies were established from crosses among apomictic lines and with sexual lines. Progeny from testcrossing lines and F1 progenies with a dominant marker stock revealed a low and varied level of maternal-type offspring. We conclude that these lines have a low level of apomictic seed formation and differ in their ability to transmit the characteristic of facultative apomixis to their F1 progenies.
Faraday effects of tetrahedrally coordinated Co3+ in magnetic garnets. (1988)

Effects of spin-orbit interaction (S.O.) and S4 low symmetry crystal field on the Faraday rotation spectra (FRS) of the tetrahedral Co3+ in magnetic garnets are investigated in the scheme of the crystal field theory. The FRS of the magnetic garnets containing tetrahedral Co2+ and Co3+ are also calculated. In order to explain the observed FRS of the tetrahedral Co3+, (1) the coefficient λ of S.O. having negative sign in the -100∼-160 cm-1 range, and (2) a fairly large low-symmetry field are required.
European Corn Borer: A Nonpreference Mechanism of Leaf Feeding Resistance and Its Relationship to 1,4-Benzoxazin-3-One Concentration in Dent Corn Tissue12 (1978)

A nonpreference mechanism of resistance, as indicated by larval movement off the host plant, plays an impor tant role in the resistance of dent corn, Zea mays L., to leaf feeding by Ostrinia nubilalis (Hübner). When compared with the other inbred lines, the high level of leaffeeding resistance found in the inbred line, CI31A, can be attributcd to its increased level of non preference. Whorl concentrations of 2-hydroxy-7-methoxy-2H.1, 4-benzoxazin-3 (4H) one (HMBOA) and 2,4-dihydroxy-7-methoxy-2H-I, 4-benzoxazin-3(4H)-one (DIMBOA) were significantly different between inbred lines. The data indicate that DIMBOA is a primary chemical factor in the expression of non preference.
Dual-Energy CT with Fast-kVp Switching and Its Applications in Orthopedics (2013)

The metal artifacts obscure or mimic pathologies and thus severely limit the diagnostic value of CT imaging in orthopedic applications. The fundamental root cause is the beam hardening effect due to the polychromatic X-ray beam. Recently, dual-energy CT with fast-kVp switching technique has been introduced that allows synthetic monochromatic energy images to be generated through material decomposition. These monochromatic energy images are not only free of metal artifacts, but also available at a broad energy range for optimal contrast at bone-tissue interface. This article summarizes the principle of this advanced CT technology with emphasis in its capability in suppressing metal implantinduced CT artifacts.
Presence of autocrine hepatocyte growth factor-Met signaling and its role in proliferation and migration of SNU-484 gastric cancer cell line (2005)

Autocrine stimulation via coexpression of hepatocyte growth factor (HGF) and its receptor (Met) has been reported in many human sarcomas, but few in carcinomas. In this report, we found that one gastric cancer cell line, SNU-484, among 11 gastric cell lines tested has an autocrine HGF- Met stimulation. RT-PCR, ELISA and scattering assay using MDCK cells revealed that SNU-484 cells secreted a significant amount of active HGF (about 1.25 +/- 0.41 ng/24 h/10(6) cells) into conditioned medium. Resultantly, Met in this cell line was constitutively phosphorylated. Neutralizing antibodies against HGF reduced the tyrosine phosphorylation of Met, resulting in the inhibition of cell proliferation and migration (P <0.005). To the best of our knowledge, this is the first report on autocrine HGF-Met signaling in a gastric cancer cell line. Our observations with SNU-484 cells suggest that HGF is involved in the development and/or progression of some gastric carcinoma through an autocrine mechanism.