gebhart/patrepeval huggingface dataset:
Heart Allograft Tolerance Induced and Maintained by Vascularized Hind-Limb Transplant in Rats (2013)

Organ/tissue transplantation has become an effective therapy for end-stage diseases. However, immunosuppression after transplantation may cause severe side effects. Donor-specific transplant tolerance was proposed to solve this problem. In this study, we report a novel method for inducing and maintaining heart allograft tolerance rats. First, we induced indefinite vascularized hind-limb allograft survival with a short-term antilymphocyte serum + Cyclosporine A treatment. Peripheral blood chimerism disappeared 6-7 weeks after immunosuppression was withdrawn. Then the recipients accepted secondary donor-strain skin and heart transplantation 200 days following vascularized hind-limb transplantation without any immunosuppression, but rejected third party skin allografts, a status of donor-specific tolerance. The ELISPOT results suggested a mechanism of clone deletion. These findings open new perspectives for the role of vascularized hind-limb transplant in the induction and maintenance of organ transplantation tolerance.
Disparate Effects of Triphenylethylene Antiestrogens on Estrogen and Progestin Biosyntheses by Cultured Rat Granulosa Cells* (1984)

The influence of triphenylethylene antiestrogens on FSH-stimulated production of estrogen, progesterone, and 20 alpha-hydroxy-4-pregnen-3-one (20 alpha-OH-P) was examined in cultured rat granulosa cells. The cells were cultured with increasing concentrations of FSH, with or without diethylstilbestrol (DES) or various antiestrogens. After 3 days, medium progesterone and 20 alpha-OH-P contents were determined. Cells were reincubated for an additional 8 h with delta 4-androstene-3,17-dione, and estrogen formation was measured. Steroid production was negligible by cultures treated with DES or antiestrogens alone. FSH treatment increased estrogen and progestin production, while the addition of DES (10(-7) M) further enhanced FSH-stimulated steroidogenesis. Likewise, treatment with 10(-6) M of the antiestrogens tamoxifen (Tam), nafoxidine (Naf), or clomiphene citrate (CC) also enhanced FSH-stimulated aromatase activity. In contrast, the antiestrogens each inhibited FSH stimulation of progesterone and 20 alpha-OH-P production (greater than 73% inhibition at 300 ng/ml FSH). Increasing concentrations (3 X 10(-8)-10(-6) M) of the antiestrogens augmented the stimulatory effect of FSH (10 ng/ml) on estrogen production in a dose-related manner (CC greater than Tam greater than Naf). Similar doses of these antiestrogens inhibited the stimulatory effect of FSH (300 ng/ml) on progesterone and 20 alpha-OH-P production (Tam greater than CC greater than Naf). The observed inhibition of progestin production is associated with decreases in FSH-stimulated pregnenolone biosynthesis in antiestrogen-treated cells incubated with 10(-6) M cyanoketone. Furthermore, the antiestrogens inhibited the binding of [3H]estradiol to ovarian estrogen receptors with binding affinity constants of 364, 437, and 2144 nM for CC, Tam, and Naf, respectively. Thus, antiestrogens exert disparate actions on granulosa cell estrogen and progestin biosyntheses. Like estrogens, CC, Tam, and Naf enhance FSH-stimulated aromatase activity with potencies comparable with their abilities to interact with ovarian estrogen receptors. However, unlike estrogens, the antiestrogens inhibit FSH-stimulated progestin biosynthesis, partially via suppression of pregnenolone biosynthesis. The present granulosa cell culture system provides a valuable model for elucidating the disparate actions of estrogens and antiestrogens on ovarian steroidogenesis.
Degrees Revoked in Soviet Union (1982)

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Conformationally Rigid Tricyclic Tripods: Synthesis and Application to Preparation of Enterobactin Analogs (1994)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTConformationally Rigid Tricyclic Tripods: Synthesis and Application to Preparation of Enterobactin AnalogsBruno Tse and Yoshito KishiCite this: J. Org. Chem. 1994, 59, 25, 7807–7814Publication Date (Print):December 1, 1994Publication History Published online1 May 2002Published inissue 1 December 1994https://pubs.acs.org/doi/10.1021/jo00104a043https://doi.org/10.1021/jo00104a043research-articleACS PublicationsRequest reuse permissionsArticle Views611Altmetric-Citations30LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-AlertscloseSupporting Info (1)»Supporting Information Supporting Information Get e-Alerts
Epidermal cell differentiation in cotton mediated by the homeodomain leucine zipper gene, GhHD‐1 (2012)

Gossypium hirsutum L. (cotton) fibres are specialized trichomes a few centimetres in length that grow from the seed coat. Few genes directly involved in the differentiation of these epidermal cells have been identified. These include GhMYB25-like and GhMYB25, two related MYB transcription factors that regulate fibre cell initiation and expansion. We have also identified a putative homeodomain leucine zipper (HD-ZIP) transcription factor, GhHD-1, expressed in trichomes and early fibres that might play a role in cotton fibre initiation. Here, we characterize GhHD-1 homoeologues from tetraploid G. hirsutum and show, using reporter constructs and quantitative real-time PCR (qRT-PCR), that they are expressed predominantly in epidermal tissues during early fibre development, and in other tissues bearing epidermal trichomes. Silencing of GhHD-1 reduced trichome formation and delayed the timing of fibre initiation. Constitutive overexpression of GhHD-1 increased the number of fibres initiating on the seed, but did not affect leaf trichomes. Expression of GhHD-1 in cotton silenced for different fibre MYBs suggest that in ovules it acts downstream of GhMYB25-like, but is unaffected in GhMYB25- or GhMYB109-silenced plants. Microarray analysis of silencing and overexpression lines of GhHD-1 indicated that it potentially regulates the levels of ethylene and reactive oxidation species (ROS) through a WRKY transcription factor and calcium-signalling pathway genes to activate downstream genes necessary for cell expansion and elongation.
Predation, reputation, and entry deterrence (1997)

Abstract Economists often argue that predatory practices are irrational, since there exist cheaper or more certain means to gain or maintain a monopoly. Our gametheoretic, equilibrium analysis suggests that if a firm is threatened by several potential entrants, then predation may be rational against early entrants, even if it is costly when viewed in isolation, because it yields a reputation which deters other entrants. Asymmetric information plays a crucial role in our analysis, since it provides the rationale for entrants to base their expectations of the firm's future behavior on its past actions. The analysis also suggests methods to treat general reputational phenomena.
Search for boosted diphoton resonances in the 10 to 70 GeV mass range using 138 fb−1 of 13 TeV pp collisions with the ATLAS detector (2023)

A bstract A search for diphoton resonances in the mass range between 10 and 70 GeV with the ATLAS experiment at the Large Hadron Collider (LHC) is presented. The analysis is based on pp collision data corresponding to an integrated luminosity of 138 fb − 1 at a centre-of-mass energy of 13 TeV recorded from 2015 to 2018. Previous searches for diphoton resonances at the LHC have explored masses down to 65 GeV, finding no evidence of new particles. This search exploits the particular kinematics of events with pairs of closely spaced photons reconstructed in the detector, allowing examination of invariant masses down to 10 GeV. The presented strategy covers a region previously unexplored at hadron colliders because of the experimental challenges of recording low-energy photons and estimating the backgrounds. No significant excess is observed and the reported limits provide the strongest bound on promptly decaying axion-like particles coupling to gluons and photons for masses between 10 and 70 GeV.
Prediction of the tertiary structure of a caspase‐9/inhibitor complex (2000)

Apoptosis, or programmed cell death, plays a central role in the development and homeostasis of an organism. The breakdown of cellular proteins in apoptosis is mediated by caspases, which comprise a highly conserved family of cysteine proteases with specificity for aspartic acid residues at the P1 positions of their substrates. Multiple lines of evidence show that caspase-9 is critical for an apoptosis pathway mediated via the mitochondria. In this study, the three-dimensional structure of the catalytic domain of caspase-9 and its interaction with the inhibitor acetyl-Asp-Val-Ala-Asp fluoromethyl ketone (Ac-DVAD-fmk) have been predicted by a segment matching modeling procedure. As expected, the predicted caspase-9 structure shows both a high similarity in the overall folding topology and remarkable differences in the surface loop regions as compared to other caspase family members such as caspase-1, -3 and -8, for which crystal structures have been determined. This kind of comparative analysis reflects the convergence-divergence duality among the caspases. Moreover, some subtle differences have been observed between caspase-9 and caspase-3 in the subsite contacts with the covalently linked inhibitor Ac-DVAD-fmk. Based on the X-ray structural analysis of caspase-8, a main chain carbonyl oxygen appears to be involved in a catalytic triad with the active site Cys and His residues. The corresponding carbonyl oxygen in caspase-9, together with other expected features of the catalytic apparatus, appears in our model. The predicted structure of caspase-9 can serve as a reference for subsite analysis relative to rational design of highly selective caspase inhibitors for therapeutic application.
ChemInform Abstract: Synthesis of 6,7‐Dimethoxy‐1‐halobenzyl‐1,2,3,4‐tetrahydroisoquinolines. (2000)

Abstract ChemInform is a weekly Abstracting Service, delivering concise information at a glance that was extracted from about 100 leading journals. To access a ChemInform Abstract of an article which was published elsewhere, please select a “Full Text” option. The original article is trackable via the “References” option.
Extracellular Vesicle Biology in the Pathogenesis of Lung Disease (2017)

Abstract As our understanding of diseases of the lung continues to evolve, we recognize that the mechanisms that drive cell/environment communication leading to disease development and progression are complex. In 2008, investigators first identified intact cell free microRNAs in circulation with some localized within lipid-encapsulated microvesicles termed extracellular vesicles (EVs). Prior to and following this discovery, investigators have determined that EVs may drive biological processes fundamental to human disease and homeostasis. The cargo in EVs which includes, proteins, miRNAs and mRNAs is protected from degradation, often reflects the pathogenesis of the cell of origin and may serve as a conduit for communication between cells subsequently reprogramming recipient cell function. Furthermore, EVs have been detected in bodily fluids including blood urine, sputum and bronchoalveolar lavage. The release and shuttling of EVs between cells following both environmental exposure and during disease development and progression has added a new layer of complexity to cell-cell communication in lung disease. While the majority of studies implicating EVs in human biology have been conducted in cancer, we have witnessed an emergence of EV based studies in other physiopathological conditions. EV mediated transfer of genetic content may link environmental stressors to the lung immune response through intercellular communication within the lung and development of disease. This perspective will focus on the growing field of EV biology in human lung diseases and its application to both the development and progression of lung disease and in biomarker discovery.
ChemInform Abstract: Practical Access to 2‐Alkylsuccinates Through Asymmetric Catalytic Hydrogenation of Stobbe‐Derived Itaconates. (1998)

Abstract ChemInform is a weekly Abstracting Service, delivering concise information at a glance that was extracted from about 100 leading journals. To access a ChemInform Abstract of an article which was published elsewhere, please select a “Full Text” option. The original article is trackable via the “References” option.
STUDIES ON EXPERIMENTAL IODINE ALLERGY: 2. IODINATED PROTEIN ANTIGENS AND THEIR GENERATION FROM INORGANIC AND ORGANIC IODINE-CONTAINING CHEMICALS (2004)

We hypothesize that iodine allergy is an immune response to iodinated autologous proteins generated in vivo from iodine-containing organic and inorganic chemicals. In this report, effects of protein iodination on elicitogenic activity in guinea pig iodine allergy model and iodinated protein antigen generation in vitro from iodine-containing chemicals were investigated. Active cutaneous anaphylaxis (ACA) and delayed-type hypersensitivity (DTH) tests were performed in guinea pigs immunized with iodine. The amount of iodine (I2) reacted to proteins for giving them an eliciting activity of ACA was > or = 0.15 micromol for 1 mg of albumin. DTH reactions were provoked by intradermal injection of 10(6) PECs reacted with > or = 0.075 micromol of I2. I2 was generated from a potassium iodide (KI) solution or iodinated contrast media by UV light irradiation. X-ray irradiation of KI and iodinated contrast media in the presence of protein resulted in the generation of iodinated protein antigens. The generation of iodinated protein antigens was inhibited in the presence of reducing agents. Therefore, it is noteworthy that iodine allergy of the present hypothesis is dependent on reactive oxygens. By presenting these ex vivo and in vitro data, we discuss the possibilities for the generation of iodinated protein antigens in vivo.
Preparation of new polyether with oxetane pendant group (1998)

A new oxetane-containing polyether was synthesized by polycondensation of bisphenol-AF (BPAF) with 3,3-bis(chloromethyl)oxetane (BCMO) using the phase-transfer catalyzed method. The polycondensation proceeded very smoothly in aromatic solvents, catalyzed by quaternary ammonium or phosphonium salts, such as tetrabutylammonium bromide (TBAB) and tetrabutylphosphonium bromide (TBPB), to afford the polymer with high yield and molecular weight. Further, a polymer with relatively high molecular weight was obtained when the reactions were carried out in aromatic and lipophilic solvents such as benzene and nitrobenzene. The modification of this oxetane-containing polyether was easily achieved by carrying out ring-opening of the oxetane ring by using hydrogen chloride in methylene chloride, which produced a functional polymer containing hydroxyl and chloro groups. The oxetane-containing polyether was observed to be soluble in chlorinated aliphatic hydrocarbons such as methylene chloride and chloroform, as well as polar solvents such as DMSO, DMF, and DMAc, and also some common organic solvents such as benzene and toluene. However, it was insoluble in both aliphatic hydrocarbons as well as alcoholic solvents. The oxetane-containing polyether was observed to start losing weight at around 300°C under nitrogen atmosphere, and 10% weight loss was measured to be 411°C. The glass transition temperature of the oxetane-containing polyether was measured to be 134°C and the wide-angle X-ray diffraction pattern revealed this polymer to be semicrystalline. © 1998 John Wiley & Sons, Inc. J Polym Sci A: Polym Chem 36: 103–107, 1998
Multi-Scale Imaging at the Coherence and Imaging Beamline I13 at Diamond (2018)

The Diamond I13 imaging and coherence beamline performs multiscale imaging and tomography with phase sensitive imaging methods. Operating in the energy range of 6-30keV, the achievable resolution ranges from several microns to tens of nanometers The beamline is unique in combining imaging methods in real and reciprocal spaces, which are available on two independently operating branchlines. The scientific program is currently being developed with the distinct capabilities offered by the beamline. Most recently ptycho-tomography has become operational and a multitude of scientific projects is linking the research between both branchlines.
Efficient Synthesis of Substituted Biaryl Anilines and Biaryl Phenols via a Suzuki Cross‐Coupling Reaction. (2005)

Abstract For Abstract see ChemInform Abstract in Full Text.
Feedforward calculation in tracking control of flexible robots (2002)

A family of asymptotically stabilizing tracking control laws was introduced by the author (1991) for a class of nonlinear Hamiltonian systems. These control laws all have the structure of a sum of a feedback design based on the passivity consideration and a feedforward obtained via a procedure that is closely related to plant inversion. In this paper calculation of the feedforward is considered in detail for both flexible joint robots and a single planar flexible link. The latter also leads to a general result relating inverse dynamics to model reference control in the case of linear systems.< <ETX xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">&gt;</ETX>
Blue-emitting Ir(iii) phosphors with 2-pyridyl triazolate chromophores and fabrication of sky blue- and white-emitting OLEDs (2013)

Heteroleptic Ir(III) complexes with 3-tert-butyl-5-(2-pyridyl)-1,2,4-triazolate chromophore (bptz) and cyclometalating benzyldiphenylphosphine (bdp) or phenyl diphenylphosphinite (pdpit) ancillary (i.e. [Ir(bptz)2(bdp)] (1) and [Ir(bptz)2(pdpit)] (2)) are synthesized upon treatment of [IrCl3(tht)3] (tht = tetrahydrothiophene) with the relevant phosphine, followed by the addition of 2 equiv. of bptz chelate at elevated temperature. Their photophysical properties in solution were measured, along with the characteristics detected as dopants in thin solid films. For application, organic light emitting diodes (OLEDs) were also fabricated using 1 and 2 as dopants, achieving respective maximum efficiencies of 17.8% (44.8 cd A−1 and 46.3 lm W−1) and 9.1% (22.8 cd A−1 and 23.6 lm W−1). In addition, sky blue iridium complex 1 was used with red osmium complex [Os(bpftz)2(PPhMe2)2] (3) to fabricate phosphorescent OLEDs with a sophisticated red/blue/red emitting layer architecture, attaining a stable warm white color with CIE coordinates of (0.397, 0.411). This white OLED attained an electroluminescence efficiency of up to 18.1%, 39.6 cd A−1, and 35.7 lm W−1 for the forward direction.
Disk-to-Pyramidal GaAs Islands Shape Evolution on Nanodisks-Patterned Substrate (2008)

In this paper, we show the shape evolution of GaAs islands which grow unconventionally from underneath an array of SiO <sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">2</sub> nanodisks. The growth mechanism consists of catalytic growth and facet formation.
Spiral wave meandering and wavefront-obstacle separation (2002)

For reentrant arrhythmias, the authors show that the meandering transition is determined by the medium conditions for spiral wave tip attachment-separation from an unexcitable strip of thickness that is comparable with the wavefront thickness.
Network Traffic Modeling Using a Multifractal Wavelet Model (2001)

In this paper, we develop a simple and powerful multiscale model for synthesizing nonGaussian, long-range dependent (LRD) network traffic. Although wavelets effectively decorrelate LRD data, wavelet-based models have generally been restricted by a Gaussianity assumption that can be unrealistic for traffic. Using a multiplicative superstructure on top of the Haar wavelet transform, we exploit the decorrelating properties of wavelets while simultaneously capturing the positivity and “spikiness” of nonGaussian traffic. This leads to a swift0(N)algorithm for fitting and synthesizing N-point data sets. The resulting model belongs to the class of multifractal cascades, a set of processes with rich statistical properties. We elucidate our model’s ability to capture the covariance structure of real data and then fit it to real traffic traces. Queueing experiments demonstrate the accuracy of the model for matching real data.
Semiconductor Lasers on Silicon (2014)

Recent work has focused on the epitaxial growth of III-V layers on silicon using intermediate buffer layers, typically Ge and strained superlattices, to minimize dislocations propagating into the active region. The use of quantum dot (QD) laser gain material can minimize the effect of threading dislocations on threshold and power, even after aging. These lasers can have low threshold, high cw power (180 mW CW), high cw temperature (120 °C) and high T <sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">0</sub> (>200K up to 50°C).
Loss or mismatch of MHC class I is sufficient to trigger NK cell‐mediated rejection of resting lymphocytes in vivo – role of KARAP/DAP12‐dependent and ‐independent pathways (2004)

A prediction from the "missing self" hypothesis is that down-regulation of MHC class I on resting hematopoietic cells should be sufficient to make them susceptible to NK cell killing. Using a method enabling kinetic and quantitative assessments of NK cell-mediated rejection responses in vivo, we here show that resting hematopoietic cells from beta(2)-microglobulin-deficient (beta(2)m(-/-)) mice were rapidly rejected in unmanipulated C57BL/6 (B6) mice. In situations of allelic MHC class I mismatches rejection occurred but required longer time. beta(2)m(-/-) donor cells pre-activated with concanavalin A were more efficiently eliminated compared to resting cells, as were MHC(-) tumor cells. When recipient mice were pretreated with an IFN inducer to activate NK cells, rejection was also enhanced. The signaling adaptor KARAP/DAP12 was dispensable for rejection of beta(2)m(-/-) cells (lacking MHC) but critical for rejection of BALB/c cells (mismatched MHC) in unmanipulated B6 recipients. In contrast, B6 recipients with pre-activated NK cells rejected BALB/c cells in a KARAP/DAP12-independent fashion. Loss or mismatch of MHC class I in resting cells was thus sufficient to convey susceptibility to NK cell rejection. However, activation of the effector or the target enhanced rejection and shifted the balance between different signaling pathways involved.