gebhart/patrepeval huggingface dataset:
Relativistic BWO With Linearly Polarized Gaussian Radiation Pattern (2014)

An X-band relativistic backward wave oscillator (BWO) is proposed to provide high-power Gaussian radiation that is attractive for many applications. A Bragg reflector with combined single-fold left- and right-spiral corrugations of its wall was applied to the cathode end of the interaction space. Such a reflector converts the operating backward TM <sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">01</sub> -mode of the BWO to the forward TE <sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">11</sub> -mode with linear polarization that is extracted as a Gaussian microwave beam. Frequency tuning over 6% with radiation power 100-350 MW is achieved by varying the magnitude of the guide magnetic field. Computer simulations were used to analyze BWO operation.
Enantioselective Synthesis of Axially Chiral Biaryls by the Pd- Catalyzed Suzuki-Miyaura Reaction: Substrate Scope and Quantum Mechanical Investigations (2010)

We report efficient syntheses of axially chiral biaryl amides in yields ranging from 80−92%, and with enantioselectivity in the range 88−94% ee employing an asymmetric Suzuki−Miyaura process with Pd(OAc)&lt;sub&gt;2&lt;/sub&gt; and KenPhos as ligand. These studies demonstrate that electron-rich and electron-deficient &lt;i&gt;o&lt;/i&gt;-halobenzamides can be efficiently coupled with 2-methyl-1-naphthylboronic acid and 2-ethoxy-1-naphthylboronic acid. The yields and selectivities of the reactions are independent of the nature of halogen substituent on the benzamide coupling partner. Our investigations demonstrate that axially chiral heterocyclic and biphenyl compounds can also be synthesized with this methodology. We also report computational studies used to determine the origin of stereoselectivity during the selectivity-determining reductive elimination step of the related coupling of tolyl boronic acid with naphthylphosphonate bromide that was reported in a previous publication (&lt;i&gt;J. Am. Chem. Soc.&lt;/i&gt; &lt;b&gt;2000&lt;/b&gt;, &lt;i&gt;122&lt;/i&gt;, 12051−12052). These studies indicate that the stereoselectivity arises from a combination of weak -(C)H··O interactions as well as steric interactions between the tolyl and naphthylphosphonate addends in the transition state for C−C coupling.
Pulmonary antioxidant enzyme activity during early development: Effect of ventilation (2001)

OBJECTIVE: To examine the effect of tidal liquid ventilation (TLV) and conventional gas ventilation (GV) on the pulmonary antioxidant enzyme (AOE) activity in two groups of preterm lambs at 110 and 120 days of gestation and to compare these results to age-matched fetal controls. DESIGN: Experimental, prospective, randomized, controlled study. SETTING: School of medicine, department of physiology. SUBJECTS: Thirty-two premature lambs at 110 days (n = 16) and 120 days (n = 16) gestation. INTERVENTIONS: Six lambs at 110 and 120 days were ventilated with TLV for 4 hrs. Three lambs at 110 days were ventilated with GV for 3 hrs, and six lambs at 120 days were ventilated with GV for 4 hrs. Four lambs, each at 110 and 120 days, were used as age-matched fetal controls. Measurements: Sequential measurements of arterial blood chemistries were performed in all groups. Biochemical assays included catalase activity, superoxide dismutase activity, and glutathione peroxidase activity. Histologic examinations of lung sections from TLV and GV lungs were performed. Main Result: Despite vast differences in physiologic outcome, there were fewer differences in AOE activity as a function of ventilation (fetal control, GV, and TLV lambs) and/or gestational age. There were no significant differences in superoxide dismutase and glutathione peroxidase activity as a function of age or ventilation. Catalase activity was significantly higher (p <.05) in fetal 120-day control lambs (24.8 +/- 1.9 units/mg protein) relative to the 110-day control lambs (14.3 +/- 1.7 units/mg protein). Catalase activity significantly (p <.05) decreased in both GV and TLV 120 day lambs compared with fetal controls; yet, in the 110-day gestational lambs, there were no significant differences in enzyme level as a function of ventilation. Thus, an age-specific response to ventilation was evident for catalase activity. CONCLUSION: The present data demonstrate several developmental differences in AOE activity. The lack of ventilation effect in AOE activity, in view of the big difference in physiologic and inflammatory outcomes, suggests that mechanisms associated with free radicals do not underlie the response to different modes of ventilation.
ChemInform Abstract: Nucleotides and Nucleic Acids: Mononucleotides (2010)

Abstract Review: 62 refs.
Efficient Enantioselective Synthesis of Piperidines through Catalytic Asymmetric Ring‐Opening/Cross‐Metathesis Reactions (2007)

Mo the better! Chiral Mo complexes promote highly efficient asymmetric ring-opening/cross-metathesis reactions that afford functionalized piperidines in high E:Z selectivity and enantiomeric purity (see scheme for example; TBS=tert-butyldimethylsilyl). In most cases, Ru catalysts are ineffective.
Bisulfite pretreatment changes the structure and properties of oil palm empty fruit bunch to improve enzymatic hydrolysis and bioethanol production (2015)

Bisulfite pretreatment is a proven effective method for improving the enzymatic hydrolysis of empty fruit bunch (EFB) from oil palm for bioethanol production. In this study, we set out to determine the changes that occur in the structure and properties of EFB materials and fractions of hemicellulose and lignin during the bisulfite pretreatment process. The results showed that the crystallinity of cellulose in EFB increased after bisulfite pretreatment, whereas the EFB surface was damaged to various degrees. The orderly structure of EFB, which was maintained by hydrogen bonds, was destroyed by bisulfite pretreatment. Bisulfite pretreatment also hydrolyzed the glycosidic bonds of the xylan backbone of hemicellulose, thereby decreasing the molecular weight and shortening the xylan chains. The lignin fractions obtained from EFB and pretreated EFB were typically G-S lignin, and with low content of H units. Meanwhile, de-etherification occurred at the β-O-4 linkage, which was accompanied by polymerization and demethoxylation as a result of bisulfite pretreatment. The adsorption ability of cellulase differed for the various lignin fractions, and the water-soluble lignin fractions had higher adsorption capacity on cellulase than the milled wood lignin. In general, the changes in the structure and properties of EFB provided insight into the benefits of bisulfite pretreatment.
Multi-disciplinary integrated design automation tool for automotive cyber-physical systems (2014)

This paper presents our multi-year experience in the development of a Functional Modeling Compiler (FMC), a new model-based design tool for the development of multi-disciplinary automotive cyber-physical systems. We show how system-level simulation models suitable for design-space exploration of complex architectures can be synthesized from functional specifications to test and validate the interactions between ECUs, control algorithms, and the multi-physics.
Characterization of a Low-Profile, Flexible, and Acoustically Transparent Receive-Only MRI Coil Array for High Sensitivity MR-Guided Focused Ultrasound (2022)

Magnetic resonance guided focused ultrasound (MRgFUS) is a non-invasive therapeutic modality for neurodegenerative diseases that employs real-time imaging and thermometry monitoring of targeted regions. MRI is used in guidance of ultrasound treatment; however, the MR image quality in current clinical applications is poor when using the vendor built-in body coil. We present an 8-channel, ultra-thin, flexible, and acoustically transparent receive-only head coil design (FUS-Flex) to improve the signal-to-noise ratio (SNR) and thus the quality of MR images during MRgFUS procedures. Acoustic simulations/experiments exhibit transparency of the FUS-Flex coil as high as 97% at 650 kHz. Electromagnetic simulations show a SNR increase of 13× over the body coil. In vivo results show an increase of the SNR over the body coil by a factor of 7.3 with 2× acceleration (equivalent to 11× without acceleration) in the brain of a healthy volunteer, which agrees well with simulation. These preliminary results show that the use of a FUS-Flex coil in MRgFUS surgery can increase MR image quality, which could yield improved focal precision, real-time intraprocedural anatomical imaging, and real-time 3D thermometry mapping.
The degree of readiness of selected biomarkers for the early detection of hepatocellular carcinoma: Notes from a recent workshop (2008)

This opinion piece evaluates the degree of readiness of 13 candidate biomarkers or panels of biomarkers for the early detection of hepatocellular carcinoma (HCC), or for the staging of liver fibrosis. As candidate biomarkers for the early detection of disease are identified, it is important to understand where they are in the developmental pipeline and how they might be employed. HCC is a growing public health problem, and its early detection is believed to be important in its management. Current detection methods are limited in usefulness or practicality, and there is a need for better methods to diagnose liver disease. Therefore, a number of candidate biomarkers, considered to be attractive because of their advanced stage of development or inherent scientific value, were evaluated for specificity and sensitivity for detection of liver disease. Study design, confirmatory evidence and assay practicality associated with each of the biomarkers are considered. The comments in this review reflect the authors' opinions and are based on a recent workshop convened by the Hepatitis B Foundation of America and the US National Cancer Institute's Early Detection Research Network. It is emphasized that only a selected set of biomarkers was considered; thus, this review is not comprehensive and not intended to review all candidate HCC biomarkers.
A new theoretical explanation of the high field conductivity behaviour of irradiated non-polar liquids (1987)

We show, in figs 1–5, how some typical current density characteristics are affected by variations in the model parameters. Although a direct comparison with experiment is not included in the present work the shape and magnitude of these curves agree closely with those obtained from experimental measurements on typical non-polar liquids [8]. Our choice of recombination coefficients is also broadly in line with those given in the literature. A more detailed account of this work will be given in a future publication.
Using the run-time sizes of data structures to guide parallel-thread creation (1994)

Dynamic granularity estimation is a new technique for automatically identifying expressions in functional languages for parallel evaluation. Expressions with little computation relative to thread-creation costs should evaluate sequentially for maximum performance. Static identification of such threads is however difficult. Therefore, dynamic granularity estimation has compile-time and run-time components: Abstract interpretation statically identifies functions whose complexity depends on data structure sizes; the run-time system maintains approximations to these sizes. Compiler-inserted checks consult this size information to make thread creation decisions dynamically. We describe dynamic granularity estimation for a list-based functional language. Extension to general recursive data structures and imperative operations is possible. Performance measurements of dynamic granularity estimation in a parallel ML implementation on a shared-memory machine demonstrate the possibility of large reductions (&gt;20%) in execution time.
Extreme ultraviolet interferometry (1997)

EUV lithography is a promising and viable candidate for circuit fabrication with 0.1-micron critical dimension and smaller. In order to achieve diffraction-limited performance, all-reflective multilayer-coated lithographic imaging systems operating near 13-nm wavelength and 0.1 NA have system wavefront tolerances of 0.27 nm, or 0.02 waves RMS. Owing to the highly-sensitive resonant reflective properties of multilayer mirrors and extraordinarily tight tolerances set forth for their fabrication, EUV optical systems require at-wavelength EUV interferometry for final alignment and qualification. This dissertation discusses the development and successful implementation of high-accuracy EUV interferometric techniques. Proof-of-principle experiments with a prototype EUV point-diffraction interferometer for the measurement of Fresnel zoneplate lenses first demonstrated sub-wavelength EUV interferometric capability. These experiments spurred the development of the superior phase-shifting point-diffraction interferometer (PS/PDI), which has been implemented for the testing of an all-reflective lithographic-quality EUV optical system. Both systems rely on pinhole diffraction to produce spherical reference wavefronts in a common-path geometry. Extensive experiments demonstrate EUV wavefront-measuring precision beyond 0.02 waves RMS. EUV imaging experiments provide verification of the high-accuracy of the point-diffraction principle, and demonstrate the utility of the measurements in successfully predicting imaging performance. Complementary to the experimental research, several areas of theoretical investigation related to the novel PS/PDI system are presented. First-principles electromagnetic field simulations of pinhole diffraction are conducted to ascertain the upper limits of measurement accuracy and to guide selection of the pinhole diameter. Investigations of the relative merits of different PS/PDI configurations accompany a general study of the most significant sources of systematic measurement errors. To overcome a variety of experimental difficulties, several new methods in interferogram analysis and phase-retrieval were developed: the Fourier-Transform Method of Phase-Shift Determination, which uses Fourier-domain analysis to improve the accuracy of phase-shifting interferometry; the Fourier-Transform Guided Unwrap Method, which was developed to overcome difficulties associated with a high density of mid-spatial-frequency blemishes and which uses a low-spatial-frequency approximation to the measured wavefront to guide the phase unwrapping in the presence of noise; and, finally, an expedient method of Gram-Schmidt orthogonalization which facilitates polynomial basis transformations in wave-front surface fitting procedures.
Measurements of jet observables sensitive to b-quark fragmentation in tt¯ events at the LHC with the ATLAS detector (2022)

Several observables sensitive to the fragmentation of b quarks into b hadrons are measured using 36 fb -1 of ffiffi ffi s p 13 TeV proton-proton collision data collected with the ATLAS detector at the LHC. Jets containing b hadrons are obtained from a sample of dileptonic t t events, and the associated set of chargedparticle tracks is separated into those from the primary pp interaction vertex and those from the displaced b-decay secondary vertex. This division is used to construct observables that characterize the longitudinal and transverse momentum distributions of the b hadron within the jet. The measurements have been corrected for detector effects and provide a test of heavy-quark-fragmentation modeling at the LHC in a system where the top-quark decay products are color connected to the proton beam remnants. The unfolded distributions are compared with the predictions of several modern Monte Carlo parton-shower generators and generator tunes, and a wide range of agreement with the data is observed, with p values varying from 5 10 -4 to 0.98. These measurements complement similar measurements from e e -collider experiments in which the b quarks originate from a color singlet Z= .
Density Functional Studies of Methanol Decomposition on Subnanometer Pd Clusters (2009)

A density functional theory study of the decomposition of methanol on subnanometer palladium clusters (primarily Pd4) is presented. Methanol dehydrogenation through C−H bond breaking to form hydroxymethyl (CH2OH) as the initial step, followed by steps involving formation of hydroxymethylene (CHOH), formyl (CHO), and carbon monoxide (CO), is found to be the most favorable reaction pathway. A competing dehydrogenation pathway with O−H bond breaking as the first step, followed by formation of methoxy (CH3O) and formaldehyde (CH2O), is slightly less favorable. In contrast, pathways involving C−O bond cleavage are much less energetically favorable, and no feasible pathways involving C−O bond formation to yield dimethyl ether (CH3OCH3) are found. Comparisons of the results are made with methanol decomposition products adsorbed on more extended Pd surfaces; all reaction intermediates are found to bind slightly more strongly to the clusters than to the surfaces.
Al-2.48 Dual-Tone Resist (2021)

As increasingly smaller molecular materials and material structures are devised or developed for technological applications, the demands on the processes of lithography now routinely include feature sizes that are of the order of 10 nm. In reaching such a fine level of resolution, the methods of lithography have increased markedly in sophistication and brought into play 2terminology that is unfamiliar, on the one hand, to scientists tasked with the development of new lithographic materials or, on the other, to the engineers who design and operate the complex equipment that is required in modern-day processing. Publications produced by scientists need to be understood by engineers and vice versa, and these commonly arise from collaborative research that draws heavily on the terminology of two or more of the traditional disciplines. It is developments in polymer science and material science that lead progress in areas that cross traditional boundaries, such as microlithography. This document provides the exact definitions of a selection of unfamiliar terms that researchers and practitioners from different disciplines might encounter.
Mechano-catalysis—a novel method for overall water splitting (1999)

A novel finding of mechano-catalytic overall water splitting by metal oxides, a way to produce hydrogen by water decomposition, is reported. It was clearly revealed that some simple and mixed oxide powders such as NiO, Co3O4, Cu2O, Fe3O4, and CuMO2 (M=Al, Fe, Ga), when suspended in distilled water by magnetic stirring, decompose water into H2 and O2 catalytically. The observed mechano-catalytic overall water splitting was cycled by the conversion of mechanical energy supplied by rubbing these oxide powders against the bottom wall of the reaction vessel with the stirring rod. Typical efficiency of the mechanical-to-chemical energy conversion was estimated to be 4.3% (for NiO).
Proteomic analysis of archival breast cancer clinical specimens identifies biological subtypes with distinct survival outcomes (2022)

Despite advances in genomic classification of breast cancer, current clinical tests and treatment decisions are commonly based on protein level information. Formalin-fixed paraffin-embedded (FFPE) tissue specimens with extended clinical outcomes are widely available. Here, we perform comprehensive proteomic profiling of 300 FFPE breast cancer surgical specimens, 75 of each PAM50 subtype, from patients diagnosed in 2008-2013 (n = 178) and 1986-1992 (n = 122) with linked clinical outcomes. These two cohorts are analyzed separately, and we quantify 4214 proteins across all 300 samples. Within the aggressive PAM50-classified basal-like cases, proteomic profiling reveals two groups with one having characteristic immune hot expression features and highly favorable survival. Her2-Enriched cases separate into heterogeneous groups differing by extracellular matrix, lipid metabolism, and immune-response features. Within 88 triple-negative breast cancers, four proteomic clusters display features of basal-immune hot, basal-immune cold, mesenchymal, and luminal with disparate survival outcomes. Our proteomic analysis characterizes the heterogeneity of breast cancer in a clinically-applicable manner, identifies potential biomarkers and therapeutic targets, and provides a resource for clinical breast cancer classification.
Validating the use of bioimpedance spectroscopy for assessment of fluid status in children (2018)

These results suggest BCM can be used in children as young as 2 years to measure normally hydrated weight and assess fluid status.
Capacity Contribution Induced by Pseudo-Capacitance Adsorption Mechanism of Anode Carbonaceous Materials Applied in Potassium-ion Battery (2019)

The intrinsic bottleneck of graphite intercalation compound mechanism in potassium-ion batteries necessitates the exploitation of novel potassium storage strategies. Hence, utmost efforts have been made to efficiently utilize the extrinsic pseudo-capacitance, which offers facile routes by employing low-cost carbonaceous anodes to improve the performance of electrochemical kinetics, notably facilitating the rate and power characteristics for batteries. This mini-review investigates the methods to maximize the pseudo-capacitance contribution based on the size control and surface activation in recent papers. These methods employ the use of cyclic voltammetry for kinetics analysis, which allows the quantitative determination on the proportion of diffusion-dominated vs. pseudo-capacitance by verifying a representative pseudo-capacitive material of single-walled carbon nanotubes. Synergistically, additional schemes such as establishing matched binder-electrolyte systems are in favor of the ultimate purpose of high-performance industrialized potassium-ion batteries.
Constitutional Unit (2017)

IUPAC recommendations on source-based nomenclature for single-strand polymers have so far addressed its application mainly to copolymers, non-linear polymers and polymer assemblies, and within generic source-based nomenclature of polymers. In this document, rules are formulated for devising a satisfactory source-based name for a polymer, whether homopolymer or copolymer, which are as clear and rigorous as possible. Thus, the source-based system for naming polymers is presented in a totality that serves as a user-friendly alternative to the structure-based system of polymer nomenclature. In addition, because of their widespread and established use, recommendations for the use of traditional names of polymers are also elaborated.
Power electronics for renewable energy systems (2009)

The global electrical energy consumption is still rising and there is a demand to double the power capacity within 20 years. The production, distribution and use of energy should be as technological efficient as possible and incentives to save energy at the end-user should also be set up. Deregulation of energy has in the past lowered the investment in larger power plants, which means the need for new electrical power sources may be very high in the near future. Two major technologies will play important roles to solve the future problems. One is to change the electrical power production sources from the conventional, fossil (and short term) based energy sources to renewable energy resources. Another is to use high efficient power electronics in power generation, power transmission/distribution and end-user application. This paper discuss some of the most emerging renewable energy sources, wind energy and photovoltaics, which by means of power electronics are changing from being minor energy sources to be acting as important power sources in the energy system.