gebhart/patrepeval huggingface dataset:
Electromagnetically tunable cholesterics with oblique helicoidal structure [Invited] (2020)

Cholesteric liquid crystals form a right-angle helicoidal structure with the pitch in the submicrometer and micrometer range. Because of the periodic modulation of the refractive index, the structure is capable of Bragg and Raman-Nath diffraction and mirrorless lasing. An attractive feature of cholesterics for optical applications is that the pitch and thus the wavelength of diffraction respond to temperature or chemical composition changes. However, the most desired mode of pitch control, by electromagnetic fields, has so far been elusive. Synthesis of bent-shape flexible dimer molecules resulted in an experimental realization of a new cholesteric state with an oblique helicoidal structure, abbreviated as Ch OH . The Ch OH state forms when the material is acted upon by the electric or magnetic field and aligns its axis parallel to the field. The principal advantage of Ch OH is that the field changes the pitch but preserves the single-harmonic heliconical structure. As a result, the material shows an extraordinarily broad range of electrically or magnetically tunable robust selective reflection of light, from ultraviolet to visible and infrared, and efficient tunable lasing. The Ch OH structure also responds to molecular reorientation at bounding plates and optical torques. This brief review discusses the recently established features of Ch OH electro-optics and problems to solve.
Stress-Induced Perpendicular Magnetization in Epitaxial Iron Garnet Thin Films (2012)

We have grown pseudomorphic Tm3Fe5O12 films (46–350 nm in thickness) with perpendicular magnetization on (111) Gd3Ga5O12 substrates. Among various garnets, Tm3Fe5O12 is selected because of a negatively large magnetostriction constant to overcome strong shape anisotropy in very thin films. A stress-induced anisotropy field as large as +25 kOe is estimated by calculation under a moderate in-plane tensile strain of +0.49%. The magnetization hysteresis loop and magnetic domain structure indicate the perpendicular easy axis. The domain size (W) in its maze pattern varies from 500 to 960 nm with increasing thickness (t) and agrees well with a scaling law of W∝√t.
Correction: Corrigendum: Toll-like receptor-2 deficiency induces schizophrenia-like behaviors in mice (2015)

Dysregulation of the immune system contributes to the pathogenesis of neuropsychiatric disorders including schizophrenia. Here, we demonstrated that toll-like receptor (TLR)-2, a family of pattern-recognition receptors, is involved in the pathogenesis of schizophrenia-like symptoms. Psychotic symptoms such as hyperlocomotion, anxiolytic-like behaviors, prepulse inhibition deficits, social withdrawal, and cognitive impairments were observed in TLR-2 knock-out (KO) mice. Ventricle enlargement, a hallmark of schizophrenia, was also observed in TLR-2 KO mouse brains. Levels of p-Akt and p-GSK-3α/β were markedly higher in the brain of TLR-2 KO than wild-type (WT) mice. Antipsychotic drugs such as haloperidol or clozapine reversed behavioral and biochemical alterations in TLR-2 KO mice. Furthermore, p-Akt and p-GSK-3α/β were decreased by treatment with a TLR-2 ligand, lipoteichoic acid, in WT mice. Thus, our data suggest that the dysregulation of the innate immune system by a TLR-2 deficiency may contribute to the development and/or pathophysiology of schizophrenia-like behaviors via Akt-GSK-3α/β signaling.
Design and Implementation of Distributed Ultra-High Temperature Sensing System With a Single Crystal Fiber (2018)

Modern high-temperature processes, such as fossil energy production, nuclear reactors, and chemical reactors lack robust, distributed sensing systems to map temperatures in these high-value harsh-environment systems. Regular silica-fiber-based distributed temperature sensing systems usually only operate at temperatures below about 800 °C. In this paper, we present the design, implementation, and testing of a distributed ultra-high temperature sensing system using Raman scattering intensity, which operates from room temperature to above 1400 °C. Consideration is given to the impacts of thermal radiation, fluorescence, and the multimode nature of unclad single-crystal fiber to optimize the system. Results from picosecond and sub-nanosecond lasers were compared. Measurements were taken with a ~2 m sapphire optical fiber, which represents the longest commercially available length. A spatial resolution of 12.4 cm and position standard deviation of 0.28 mm were achieved up to the maximum testing temperature of 1400 °C, which is a new record for distributed temperature sensing systems.
Traps, morphology and degradation in high efficiency polymer solar cells (2011)

Bulk heterojunction solar cells (BHJs) based on poly[N-9"-hepta-decanyl-2,7-carbazole-alt-5,5-(4',7'-di-2-thienyl-2',1',3'-benzothiadiazole)] (PCDTBT) can have internal quantum efficiencies approaching 100% but require active layers that are too thin to absorb more than ~70% of the above bandgap light.[1] In this work, we demonstrate that PCDTBT films contain a high density of hole-traps, which correlate with polymer morphology and are important for BHJ performance.
Topographic analysis of the S7 binding subsite of the tachykinin neurokinin-1 receptor (1998)

Conformationally and configurationally restricted rotameric probes of phenylalanine have been incorporated in the sequence of substance P (SP)-Arg-Pro-Lys-Pro-Gln-Gln-Phe-Phe-Gly-Leu-Met-NH2-for analyzing the binding pockets of Phe7 (S7) and Phe8 (S8), in the neurokinin-1 receptor. These analogues of phenylalanine are (2S. 3R)- and (2S, 3S)-indanylglycines, E- and Z-alpha, beta-dehydrophenylalanines, and 2(S)-alpha, beta-cyclopropylphenylalanines [delta E Phe. delta Z Phe. inverted delta E2 (S) Phe, and inverted delta Z 2 (S) Phe]. Binding data obtained with either conformationally (Ing diastereoisomers) or configurationally (delta E Phe, delta Z Phe) probes have unveiled large differences in the binding potencies of these rotameric probes. With the support of nmr data and energy calculations done on these SP-substituted analogues, we attempt to answer questions inherent to such study. First, none of these six probes prevents the formation of bioactive conformation(s) of the backbone of SP. Second, both diastereoisomers (S, S) and (S, R) of indanylglycine preferentially adopt, in the sequence of SP, the gauche (-) and trans side-chain orientations, respectively, as previously postulated from energy calculations with model peptides. However, in solution, the difference in energy between these rotamers included in the sequence of SP, compared to model peptides, is small since the other rotamer can be detected in [(2S, 3R)Ing7]SP. Finally, from this study we can hypothesize that the large variations observed in the affinities of Phe7 substituted analogues of SP must come from steric hindrance in the S7 binding site, which drastically restricts the space filling around the C alpha-C beta bond of residue 7.
A Controllable Membrane-Type Humidifier for Fuel Cell Applications—Part II: Controller Design, Analysis and Implementation (2010)

A membrane-based gas humidification apparatus was employed to actively manage the amount of water vapor entrained in the reactant gas supplied to a fuel cell stack. The humidification system utilizes a gas bypass and a series of heaters to achieve accurate and fast humidity and temperature control. A change in fuel cell load induces a reactant mass flow rate disturbance to this humidification system. If not well regulated, this disturbance creates undesirable condensation and evaporation dynamics, both to the humidification system and the fuel cell stack. Therefore, controllers were devised, tuned, and employed for temperature reference tracking and disturbance rejection. Two heater controller types were explored: on-off (thermostatic) and variable (proportional integral), to examine the ability of the feedback system to achieve the control objectives with minimal hardware and software complexities. The coordination of the heaters and the bypass valve is challenging during fast transients due to the different time scales, the actuator constraints, and the sensor responsiveness.
Air Cuff Transducer Design for Occlusion-Based Hemodynamic Measurements—An Experimental and Simulation Study (2022)

In standard clinical practice, cuff devices are widely used for non-invasive blood pressure measurements (NIBP). However, cuff-based NIBP is prone to large errors especially in cases of hypo- and hypertension. In addition to this, the cuff measurement principle allows for estimation of a number of other hemodynamic parameters (e. g. cardiac output, arterial stiffness, augmentation index) by means of analysis of the pulse waveform and/or pulse amplitude recorded in the cuff pressure. However, in standard practice, the cuff is still only used for the measurement of BP.A key reason for the observed measurement errors and the limited set of extracted parameters lies in our poor understanding of the cuff device as a transducer; the cuff pressure response to arm volume pulsations (the cuff transfer function <i>TF</i><sub>cuff</sub>) depends on a large number of factors. It is not yet clear to what extent the cuff contributes to the NIBP error, or if the cuff in its current format is reliable for measurement of arterial pulse waveform/amplitude. In this study, we investigate the isolated cuff in order to gain a better understanding of the main sources of measurement errors. By using an experimental setup which measures the cuff response to mechanically simulated arm pulsations, we find that the cuff can explain part of the NIBP errors in cases of hypotension. Also, we find that pulse waveforms can be estimated using a standard cuff; however, measurement of the pulse volume amplitude is unfeasible. We demonstrate that the observed inaccuracies can be eliminated by usage of a calibrator device which obtains real-time information on <i>TF</i><sub>cuff</sub>. These findings will enable further investigation of the effects related to the pulse travel along the compressed limb and the interaction between cuff, arm tissue, distal arm hemodynamics and arterial walls for the development of improved occlusion-based measurement strategies.
ChemInform Abstract: LIPASE‐CATALYZED HYDROLYSIS AS A ROUTE TO ESTERS OF CHIRAL EPOXY ALCOHOLS (1985)

Abstract Die enantioselektive enzymatisch katalysierte Hydrolyse von racemischen O‐Acylepoxyalkoholen wie (I) und (IV) ist eine vorteilhafte Methode zur Gewinnung von chiralen Spezies (II)/(III) bzw. (W/(VI), die nützliche Synthone darstellen.
Suppression of Leaf Feeding and Oviposition of Phytophagous Ladybird Beetles (Coleoptera: Coccinellidae) by Chitinase Gene-transformed Phylloplane Bacteria and Their Specific Bacteriophages Entrapped in Alginate Gel Beads (2003)

The chitinase gene-transformed strain KPM-007E/chi of Enterobacter cloacae was vitally entrapped in sodium alginate gel beads with its specific virulent bacteriophage EcP-01 to provide a new method for microbially digesting chitinous peritrophic membranes of phytophagous ladybird beetles Epilachna vigintioctopunctata. First, chitinase SH1 from a gram-positive bacterium Kurthia zopfii was overproduced by Escherichia coli cells and purified by affinity column chromatography. The purified enzyme effectively digested peritrophic membranes dissected from the ladybird beetles to expose epithelial tissues beneath the peritrophic membrane, and the beetles that had ingested chitinase after submergence in chitinase solution had considerably reduced their feeding on tomato leaves. KPM-007E/chi, entrapped in the alginate beads, released the chitinase. More chitinase was released when KPM-007E/chi was present with their specific virulent bacteriophage EcP-01 in the beads because of lysis of bacterial cells infected with the bacteriophages. This chitinase release from the microbial beads (containing KPM-007E/chi and EcP-01) was sufficient to digest the peritrophic membrane as well as to suppress feeding of bead-sprayed tomato leaves by the ladybird beetles. A daily supply of tomato leaves treated with the microbial beads considerably suppressed leaf feeding and oviposition by the ladybird beetles, suggesting a possible application of chitinase-secreting bacteria for suppressing herbivorous insect pests.
Effects of nitric oxide on proliferation and differentiation of rat brown adipocytes in primary cultures (1998)

1. In the present work, we study the effect of NO on the proliferation and differentiation of brown fat cells in primary cultures. 2. Brown fat precursor cells isolated from rat brown adipose tissue were cultured for 8 days until confluence and treated daily with the NO donating agents, S-nitroso-acetyl penicillamine (SNAP) or S-nitroso-L-glutathione (GSNO). Both agents (300 microM) decreased cell proliferation approximately 8 fold on day 8. The inhibitory effect of NO was unlikely to be due to cytotoxicity since (i) cells never completely lost their proliferation capacity even after 8 days of exposure to repeated additions of SNAP or GSNO, and (ii) the inhibitory effect was reversible after removal of the media containing NO donors. 3. Daily treatment with nitric oxide synthase inhibitors, such as NG-nitro-L-arginine methyl ester (L-NAME, 300 microM), led to the stimulation of cell proliferation by 44+/-5%, n=3, suggesting that NO, endogenously produced in brown adipocytes, may be involved in modulating cell growth. 4. Daily treatment with both SNAP or GSNO induced significant mitochondriogenesis, measured as the mitochondrial conversion of 3-[4,5-dimethylthiazol-2-yl-]-2,5-diphenyl tetrazolium bromide (MTT) to formazan, whilst daily treatment with L-NAME was without effect. 5. The inhibition of cell proliferation by NO donors was accompanied by the expression of two genes coding for peroxisome proliferator activated receptor-gamma and uncoupling protein-1, which are upregulated during differentiation. 6. Increasing cyclic GMP in cells by 8-bromo-cyclic GMP (100-1000 microM) did not reproduce the observed NO effects on either cell number or gene expression. On the other hand, chronic treatment with the inhibitor of the NO-stimulated guanylyl cyclase, 1H-[1,2,4]oxadiazole[4,3-a]quinoxalin-1-one (ODQ), reduced the expression of peroxisome proliferator activated receptor-gamma and uncoupling protein-1.
Predicting and controlling the reactivity of immune cell populations against cancer (2009)

Heterogeneous cell populations form an interconnected network that determine their collective output. One example of such a heterogeneous immune population is tumor-infiltrating lymphocytes (TILs), whose output can be measured in terms of its reactivity against tumors. While the degree of reactivity varies considerably between different TILs, ranging from null to a potent response, the underlying network that governs the reactivity is poorly understood. Here, we asked whether one can predict and even control this reactivity. To address this we measured the subpopulation compositions of 91 TILs surgically removed from 27 metastatic melanoma patients. Despite the large number of subpopulations compositions, we were able to computationally extract a simple set of subpopulation-based rules that accurately predict the degree of reactivity. This raised the conjecture of whether one could control reactivity of TILs by manipulating their subpopulation composition. Remarkably, by rationally enriching and depleting selected subsets of subpopulations, we were able to restore anti-tumor reactivity to nonreactive TILs. Altogether, this work describes a general framework for predicting and controlling the output of a cell mixture.
Prophylaxis of autoimmune diabetes by antigen based immune modulation: are we there yet? (2004)

Autoimmune type 1 diabetes (early onset/juvenile and slow onset T1D) is a disease mediated by autoreactive T cells accompanied by autoantibodies against islet associated antigens. The genetic predisposition, the association with certain HLA alleles (DR4 and DQ8) as well as the possibility to identify high-risk subjects by autoantibody measurement, fueled hope in regards to potential prophylaxis by vaccination. Numerous preclinical studies along with accumulating evidence for the role of certain autoantigens and putative dominant epitopes created the premises of clinical trials addressing this objective. However, the disappointing outcomes of many of such trials made it clear that significant challenges to clinical application of this concept must be addressed: we do not know at this point, how to choose the most appropriate set of autoantigens, how to optimally use them as a vaccine, whether to define and enroll only a subset of recipients, how to monitor their T cell responses to the vaccine and lastly, which the end-points of clinical T1D trials from an immunologic or metabolic perspective should be? Herein, we will approach some of the opportunities and obstacles associated with this intriguing strategy to fight autoimmune diabetes based on promising novel insight gained form studies with animal models.
Ex-chiral pool synthesis and pharmacological aspects of 3-pyrrolidinylisoxazoles. (1999)

Employing the dopamine autoreceptor agonist (-)-3-PPP (3) as well as the cholinergic receptor ligands 4 and 5 as lead compounds the 3-pyrrolidinylisoxazoles 2a,b as well as its optical antipodes ent 2a,b were synthesized from (R)-aspartic acid (6) and (S)-aspartic acid (ent-6), respectively. Pharmacological properties of the target compounds were evaluated employing dopamine D2 receptor binding studies and functional experiments on muscarinic M2 receptors.
Fabrication of zeolite membrane microreactor for carbonylation of glycerol with urea (2013)

Trabajo presentado en la 11th International Conference on Catalysis in membrane Reactors, celebrada en Oporto (Portugal) del 7 al 11 de julio de 2013.
Reparameterization invariant distance on the space of curves in the hyperbolic plane (2015)

Views Icon Views Article contents Figures & tables Video Audio Supplementary Data Peer Review Share Icon Share Twitter Facebook Reddit LinkedIn Tools Icon Tools Reprints and Permissions Cite Icon Cite Search Site Citation Alice Le Brigant, Marc Arnaudon, Frédéric Barbaresco; Reparameterization invariant distance on the space of curves in the hyperbolic plane. AIP Conference Proceedings 13 January 2015; 1641 (1): 504–511. https://doi.org/10.1063/1.4906016 Download citation file: Ris (Zotero) Reference Manager EasyBib Bookends Mendeley Papers EndNote RefWorks BibTex toolbar search Search Dropdown Menu toolbar search search input Search input auto suggest filter your search All ContentAIP Publishing PortfolioAIP Conference Proceedings Search Advanced Search |Citation Search
Sustained Activation of Rho GTPases Promotes a Synthetic Pulmonary Artery Smooth Muscle Cell Phenotype in Neprilysin Null Mice (2017)

Sustained Rho activation in NEP<sup>-/-</sup> PASMCs is associated with a decrease in SM-protein levels and increased migration and proliferation. Inactivation of RhoGDI (Rho guanine dissociation inhibitor) and RhoGAP (Rho GTPase activating protein) by phosphorylation may contribute to prolonged activation of Rho in NEP<sup>-/-</sup> PASMCs. Rho GTPases may thus have a role in integration of signals between vasopeptides and growth factor receptors and could influence pathways that suppress SM-proteins to promote a synthetic phenotype.
Elastic deformation mechanisms of softwoods in radial tension – Cell wall bending or stretching? (2008)

Abstract Radial softwood modulus E R is typically twice as high as the tangential modulus E T . The reason for this is unclear, although cell geometry is likely to contribute. The established hexagonal honeycomb model for prediction of E R is based on a cell wall bending mechanism only. If cell wall stretching also takes place, the dependence of E R on relative density will be different. If experimental data for E R as a function of relative density show deviations from cell wall bending predictions, this may indicate the presence of cell wall stretching. A SilviScan apparatus is used to measure density distribution. A procedure by means of digital speckle photography is then developed for measurements of local E R within the annual rings of spruce. Comparison is made between experimental data and the two expected density dependencies from cell wall bending and from stretching. The hypothesis of cell wall stretching as a contributing mechanism is supported based on the observed linear dependence of E R over a wide density range.
Electro- And Magneto-Optic Effects In Heavy Metal Oxide Glasses (1987)

Stable glasses composed of two or more of the oxides of bismuth, lead, gallium, and cadmium have been previously reported as having infrared cut-offs of about 8pm, significantly more transmissive than any other oxide glass. They are yellow, having a lower absorption edge at about 470 nm. Refractive indices are about 2.4 at 0.6&mu;m and 2.2 at 5&mu;m. The material dispersion and cross-over wavelength are favorable for low-loss optical fibers operating near 3&mu;m.
Recent Advances in the Biology and Medicinal Chemistry of Trpa1 (2010)

The transient receptor potential cation channel, subfamily A, member 1 (TRPA1) is a nonselective cation channel that is highly expressed in small-diameter sensory neurons, where it functions as a polymodal receptor, responsible for detecting potentially harmful chemicals, mechanical forces and temperatures. TRPA1 is also activated and/or sensitized by multiple endogenous inflammatory mediators. As such, TRPA1 likely mediates the pain and neurogenic inflammation caused by exposure to reactive chemicals. In addition, it is also possible that this channel may mediate some of the symptoms of chronic inflammatory conditions such as asthma. We review recent advances in the biology of TRPA1 and summarize the evidence for TRPA1 as a therapeutic drug target. In addition, we provide an update on TRPA1 medicinal chemistry and the progress in the search for novel TRPA1 antagonists.
Histo‐blood group ABO antigen in oral potentially malignant lesions and squamous cell carcinoma – genotypic and phenotypic characterization (2004)

Loss of histo-blood group A/B antigens is frequent in oral cancer. It is unclear whether this alteration is due to loss of the chromosomal region encoding the genes. The aim was to investigate genotypic alterations in the ABO locus in oral potentially malignant lesions and carcinomas. Seventy-three cases which expressed A/B antigen in normal epithelium by immunohistochemical (IHC) staining were investigated. Both tumour and normal cells were collected from paraffin-embedded tissue by laser microdissection. DNA was extracted and analysed by PCR coupled with restricted digestion analysis in order to establish the ABO genotype. Total and patchy loss of A/B antigen expression was found in 24/32 carcinomas, 6/7 leukoplakias with severe dysplasia, 12/17 leukoplakias with mild and moderate dysplasia, and 6/17 leukoplakias without dysplasia. Specific A/B allele loss was found in 8/24 cases with carcinoma and 3/24 cases with mild and moderate dysplasia by genotyping analysis. O allele loss was found in 10 cases involving all four groups. In patients with heterozygous genotypes, A/B allelic loss by genotyping analysis was always followed by loss of A/B antigen expression by IHC staining. Loss of A/B antigen expression in tissues which had intact ABO alleles was, however, found and may be explained by other genetic and epigenetic changes.