gebhart/patrepeval huggingface dataset:
Lentiviral Vectors Encoding Human Immunodeficiency Virus Type 1 (HIV-1)-Specific T-Cell Receptor Genes Efficiently Convert Peripheral Blood CD8 T Lymphocytes into Cytotoxic T Lymphocytes with Potent In Vitro and In Vivo HIV-1-Specific Inhibitory Activity (2008)

The human immunodeficiency virus type 1 (HIV-1)-specific CD8 cytotoxic T-lymphocyte (CTL) response plays a critical role in controlling HIV-1 replication. Augmenting this response should enhance control of HIV-1 replication and stabilize or improve the clinical course of the disease. Although cytomegalovirus (CMV) or Epstein-Barr virus (EBV) infection in immunocompromised patients can be treated by adoptive transfer of ex vivo-expanded CMV- or EBV-specific CTLs, adoptive transfer of ex vivo-expanded, autologous HIV-1-specific CTLs had minimal effects on HIV-1 replication, likely a consequence of the inherently compromised qualitative function of HIV-1-specific CTLs derived from HIV-1-infected individuals. We hypothesized that this limitation could be circumvented by using as an alternative source of HIV-1-specific CTLs, autologous peripheral CD8(+) T lymphocytes whose antigen specificity is redirected by transduction with lentiviral vectors encoding HIV-1-specific T-cell receptor (TCR) alpha and beta chains, an approach used successfully in cancer therapy. To efficiently convert peripheral CD8 lymphocytes into HIV-1-specific CTLs that potently suppress in vivo HIV-1 replication, we constructed lentiviral vectors encoding the HIV-1-specific TCR alpha and TCR beta chains cloned from a CTL clone specific for an HIV Gag epitope, SL9, as a single transcript linked with a self-cleaving peptide. We demonstrated that transduction with this lentiviral vector efficiently converted primary human CD8 lymphocytes into HIV-1-specific CTLs with potent in vitro and in vivo HIV-1-specific activity. Using lentiviral vectors encoding an HIV-1-specific TCR to transform peripheral CD8 lymphocytes into HIV-1-specific CTLs with defined specificities represents a new immunotherapeutic approach to augment the HIV-1-specific immunity of infected patients.
Diamond optomechanical crystals (2016)

Cavity-optomechanical systems realized in single-crystal diamond are poised to benefit from its extraordinary material properties, including low mechanical dissipation and wide optical transparency window. Diamond is also rich in optically active defects, such as the nitrogen-vacancy (NV) center, which behave as atom-like systems in the solid state. Predictions and observations of coherent coupling of the NV electronic spin to phonons via lattice strain has motivated the development of diamond nanomechanical devices aimed at realization of hybrid quantum systems, in which phonons provide an interface with diamond spins. In this work, we demonstrate a device platform to enable such applications: diamond optomechanical crystals (OMCs), where the co-localization of ~ 200 THz photons and ~ 6 GHz phonons in a quasi-periodic diamond nanostructure leads to coupling of an optical cavity field to a mechanical mode via the radiation pressure of light. In contrast to other material systems, diamond OMCs operating in the resolved sideband regime possess large intracavity photon capacity (&gt; 105) and sufficient optomechanical coupling rate to exceed a cooperativity of ~ 1 at room temperature and realize large amplitude optomechanical self-oscillations. Strain-mediated coupling of the high frequency (~ GHz) mechanical modes of these devices to the electronic and spin levels of diamond color centers has the potential to reach the strong spin-phonon coupling regime, and enable a coherent interface with diamond qubits for applications in quantum-nonlinear optomechanics.
A therapeutic antibody targeting osteoprotegerin attenuates severe experimental pulmonary arterial hypertension (2019)

Pulmonary arterial hypertension (PAH) is a rare but fatal disease. Current treatments increase life expectancy but have limited impact on the progressive pulmonary vascular remodelling that drives PAH. Osteoprotegerin (OPG) is increased within serum and lesions of patients with idiopathic PAH and is a mitogen and migratory stimulus for pulmonary artery smooth muscle cells (PASMCs). Here, we report that the pro-proliferative and migratory phenotype in PASMCs stimulated with OPG is mediated via the Fas receptor and that treatment with a human antibody targeting OPG can attenuate pulmonary vascular remodelling associated with PAH in multiple rodent models of early and late treatment. We also demonstrate that the therapeutic efficacy of the anti-OPG antibody approach in the presence of standard of care vasodilator therapy is mediated by a reduction in pulmonary vascular remodelling. Targeting OPG with a therapeutic antibody is a potential treatment strategy in PAH.
Variations and Temperature Dependence of the Excited State Properties of Conformationally and Electronically Perturbed Zinc and Free Base Porphyrins (1997)

The photophysical properties and their temperature dependence are reported for the sterically encumbered nonplanar zinc and free base 2,3,5,7,8,10,12,13,15,17,18,20-dodecaphenylporphyrins (ZnDPP and H2DPP), and 2,3,7,8,12,13,17,18-octaethyl-5,10,15,20-tetraphenylporphyrins (ZnOETPP and H2OETPP), and the zinc complex of 5,10,15,20-tetra-tert-butylporphyrin (ZnT(t-Bu)P). Compared to planar 5,10,15,20-tetraphenylporphyrins (ZnTPP and H2TPP), the above compounds exhibit reduced lifetimes of the lowest excited singlet state, reduced fluorescence yields, and large shifts between their absorption and emission maxima at room temperature. ZnT(t-Bu)P, which is known to adopt a ruffled conformation, displays dramatically altered photophysical properties including a 7 ps 1(π,π*) lifetime compared to one of ∼2 ns for ZnTPP at 296 K. Equally noteworthy is the return of the ZnT(t-Bu)P singlet lifetime to a “normal” value of 2.5 ns at 78 K. An analogous temperature dependence has been observed previously for the free base analog H2T(t-Bu)P. The other porphyrins investigated, with different modes of nonplanarity, display smaller temperature variations but also tend toward more normal properties at low temperatures. A more extreme case of perturbation to the tetrapyrrole electronic structure is found in zinc 2,3,5,5‘,7,8,12,18-octamethyl-13,17-bis(3-methoxy-3-oxopropyl)isoporphyrin perchlorate, a porphyrin tautomer with an interrupted π system. This zinc isoporphyrin also exhibits a short excited state lifetime of 130 ps at 296 K, which again increases to 0.8 ns at 78 K. The results for the various nonplanar porphyrins and for the isoporphyrin in several solvents indicate that the principal cause of the altered excited state lifetimes is the ability of the molecules to traverse multiple conformational surfaces in the excited state. These surfaces appear to be separated by only small energy barriers that vary with the types of conformational distortions and their concomitant perturbations of the electronic structures of the chromophores.
Micro-optical grayscale excitation lenses for atom and ion trapping. (2016)

Abstract not provided.
G-Augment: Searching for the Meta-Structure of Data Augmentation Policies for ASR (2022)

Data augmentation is a ubiquitous technique used to provide robustness to automatic speech recognition (ASR) training. However, even as so much of the ASR training process has become automated and more "end-to-end", the data augmentation policy (what augmentation functions to use, and how to apply them) remains hand-crafted. We present Graph-Augment, a technique to define the augmentation space as directed acyclic graphs (DAGs) and search over this space to optimize the augmentation policy itself. We show that given the same computational budget, policies produced by G-Augment are able to perform better than SpecAugment policies obtained by random search on fine-tuning tasks on CHiME-6 and AMI. G-Augment is also able to establish a new state-of-the-art ASR performance on the CHiME-6 evaluation set (30.7% WER). We further demonstrate that G-Augment policies show better transfer properties across warm-start to cold-start training and model size compared to random-searched SpecAugment policies.
Process and Device Considerations for the Design of a SMARTpower H-Bridge Motor Driver (1987)

This paper details the process and device design for a SMARTpower H-bridge motor driver which is ideal for battery-powered systems. In such a system the on-resistance of the power FETs is extremely important because of the limited voltage available for driving both the gates of the FETs and the load. Since the FET's are very low voltage, the channel resistance is a major contributor to on-resistance and so it is important to maximize channel width. Metallization resistance also becomes an important factor.
Benefits of Feedforward for Model Predictive Airpath Control of Diesel Engines (2022)

This paper investigates options to complement a diesel engine airpath feedback controller with a feedforward. The control objective is to track the intake manifold pressure and exhaust gas recirculation (EGR) rate targets by manipulating the EGR valve and variable geometry turbine (VGT) while satisfying state and input constraints. The feedback controller is based on rate-based Model Predictive Control (MPC) that provides integral action for tracking. Two options for the feedforward are considered one based on a look-up table that specifies the feedforward as a function of engine speed and fuel injection rate, and another one based on a (non-rate-based) MPC that generates dynamic feedforward trajectories. The controllers are designed and verified using a high-fidelity engine model in GT-Power and exploit a low-order rate-based linear parameter-varying (LPV) model for prediction which is identified from transient response data generated by the GT-Power model. It is shown that the combination of feedforward and feedback MPC has the potential to improve the performance and robustness of the control design. In particular, the feedback MPC without feedforward can lose stability at low engine speeds, while MPC-based feedforward results in the best transient response. Mechanisms by which feedforward is able to assist in stabilization and improve performance are discussed.
Isolation of Yersinia pseudotuberculosis and Listeria monocytogenes Serotype 4 from a Gray Fox (Urocyon cinereoargenteus) with Canine Distemper (1996)

In February 1993, clinical, pathological, and microbiological investigations were performed on an adult female gray fox (Urocyon cinereoargenteus) from northern Mississippi (USA). The fox had clinical signs consistent with canine distemper virus encephalitis. Eosinophilic inclusions characteristic of canine distemper virus were in the nuclei and cytoplasm of cerebral neurons and glial cells and in the cytoplasm of urinary, gastric, pancreatic and biliary epithelial cells. The liver contained multifocal microscopic nodular foci of granulomatous to pyogranulomatous inflammation and necrosis with large colonies of small Gram-negative coccobacilli. A low number of small Gram-positive bacilli were within viable-appearing Kupffer cells and hepatocytes. Yersinia pseudotuberculosis and Listeria monocytogenes serotype 4 were isolated from the liver and a mesenteric lymph node.
Comparison of Natural Surfactant and Brief Liquid Ventilation Rescue Treatment in Very Immature Lambs (1996)

We studied the effect of rescue therapy with modified porcine surfactant (Curosurf) or brief perfluorocarbon liquid ventilation on pulmonary gas exchange, mechanics and structure in very immature lambs. Both rescue strategies produced an improvement in arterial oxygenation and were able to support CO2 elimination. Histology showed unevenly inflated lungs in all but tidal-liquid-ventilated lambs. We speculate that due to immature lung architecture and relatively high permeability, previous exposure to gas ventilation impeded full effectiveness of both rescue modalities, perhaps prophylactic surfactant or liquid ventilation could be a better alternative.
Thermal Management and Energy Efficiency (2013)

The network traffic in telecommunication industry has grown very rapidly every year since its inception. As projected, the network traffic demand will reach tens or hundreds of Tb/s in a couple of years. In response to the projected growth, new design and architecture are needed in order to face the power-density challenges in the next generation telecommunication networks. As pointed out by Vukovic [1], there are two aspects of these issues. One is the network architecture and another is telecommunication equipment design.
Overcoming the Domain Gap in Neural Action Representations (2021)

Relating animal behaviors to brain activity is a fundamental goal in neuroscience, with practical applications in building robust brain-machine interfaces. However, the domain gap between individuals is a major issue that prevents the training of general models that work on unlabeled subjects. Since 3D pose data can now be reliably extracted from multi-view video sequences without manual intervention, we propose to use it to guide the encoding of neural action representations together with a set of neural and behavioral augmentations exploiting the properties of microscopy imaging. To reduce the domain gap, during training, we swap neural and behavioral data across animals that seem to be performing similar actions. To demonstrate this, we test our methods on three very different multimodal datasets; one that features flies and their neural activity, one that contains human neural Electrocorticography (ECoG) data, and lastly the RGB video data of human activities from different viewpoints.
The Utilization of Sodium Taurocholate in Excystation of Cryptosporidium parvum and Infection of Tissue Culture (2001)

Daniel Gold, Barry Stein, Saul Tzipori, The Utilization of Sodium Taurocholate in Excystation of Cryptosporidium parvum and Infection of Tissue Culture, The Journal of Parasitology, Vol. 87, No. 5 (Oct., 2001), pp. 997-1000
Block time and frequency domain modified covariance algorithms (1992)

A block modified covariance algorithm (BMCA) is proposed for autoregressive (AR) parametric spectral estimation. The BMCA can be implemented either in the time or in the frequency domain with the latter being more efficient in high-order AR estimation. Although the BMCA operates on a block of data it allows for both block and sequential (sample-by-sample) updates. The performance of the algorithm is evaluated in terms of computational complexity and convergence characteristics. Results are given for narrowband and broadband processes.< <ETX xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">&gt;</ETX>
Scintillators With Potential to Supersede Lanthanum Bromide (2009)

New scintillators for high-resolution gamma ray spectroscopy have been identified, grown and characterized. Our development efforts have focused on two classes of high-light-yield materials: europium-doped alkaline earth halides and cerium-doped garnets. Of the halide single crystals we have grown by the Bridgman method-SrI <sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">2</sub> , CaI <sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">2</sub> , SrBr <sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">2</sub> , BaI <sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">2</sub> and BaBr <sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">2</sub> -SrI <sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">2</sub> is the most promising. SrI <sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">2</sub> (Eu) emits into the Eu <sup xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">2+</sup> band, centered at 435 nm, with a decay time of 1.2 mus and a light yield of up to 115,000 photons/MeV. It offers energy resolution better than 3% FWHM at 662 keV, and exhibits excellent light yield proportionality. Transparent ceramic fabrication allows the production of gadolinium- and terbium-based garnets which are not growable by melt techniques due to phase instabilities. The scintillation light yields of cerium-doped ceramic garnets are high, 20,000-100,000 photons/MeV. We are developing an understanding of the mechanisms underlying energy dependent scintillation light yield non-proportionality and how it affects energy resolution. We have also identified aspects of optical design that can be optimized to enhance the energy resolution.
The lessons learned from two quality improvement forums (2014)

The British Medical Association (BMA) and the King's Fund have recommended that ‘shop-floor doctors’ in all hospitals should feedback the everyday management challenges they face to the senior management via doctor-management forums known as quality improvement forums (QIFs). This collaborative partnership between junior doctors and management should help to tackle these challenges and improve the service. We discuss how we set up QIFs in two hospitals, the difficulties faced and the lessons learned. The QIFs were held every two months. At each forum, speakers had five minutes to present a management problem, then five minutes to propose a possible solution. Forum attendees were asked that all discussions be helpful and productive. Many management changes were made including: changing investigation requests from paper to digital; improving the on-call bleep system, improving the on-call medical handover; and improvements to the hospitals' induction process.
ST2 as checkpoint target for colorectal cancer immunotherapy (2020)

Immune checkpoint blockade immunotherapy delivers promising clinical results in colorectal cancer (CRC). However, only a fraction of cancer patients develop durable responses. The tumor microenvironment (TME) negatively impacts tumor immunity and subsequently clinical outcomes. Therefore, there is a need to identify other checkpoint targets associated with the TME. Early-onset factors secreted by stromal cells as well as tumor cells often help recruit immune cells to the TME, among which are alarmins such as IL-33. The only known receptor for IL-33 is stimulation 2 (ST2). Here we demonstrated that high ST2 expression is associated with poor survival and is correlated with low CD8+ T cell cytotoxicity in CRC patients. ST2 is particularly expressed in tumor-associated macrophages (TAMs). In preclinical models of CRC, we demonstrated that ST2-expressing TAMs (ST2+ TAMs) were recruited into the tumor via CXCR3 expression and exacerbated the immunosuppressive TME; and that combination of ST2 depletion using ST2-KO mice with anti-programmed death 1 treatment resulted in profound growth inhibition of CRC. Finally, using the IL-33trap fusion protein, we suppressed CRC tumor growth and decreased tumor-infiltrating ST2+ TAMs. Together, our findings suggest that ST2 could serve as a potential checkpoint target for CRC immunotherapy.
Prompt-to-Prompt Image Editing with Cross Attention Control (2022)

Recent large-scale text-driven synthesis models have attracted much attention thanks to their remarkable capabilities of generating highly diverse images that follow given text prompts. Such text-based synthesis methods are particularly appealing to humans who are used to verbally describe their intent. Therefore, it is only natural to extend the text-driven image synthesis to text-driven image editing. Editing is challenging for these generative models, since an innate property of an editing technique is to preserve most of the original image, while in the text-based models, even a small modification of the text prompt often leads to a completely different outcome. State-of-the-art methods mitigate this by requiring the users to provide a spatial mask to localize the edit, hence, ignoring the original structure and content within the masked region. In this paper, we pursue an intuitive prompt-to-prompt editing framework, where the edits are controlled by text only. To this end, we analyze a text-conditioned model in depth and observe that the cross-attention layers are the key to controlling the relation between the spatial layout of the image to each word in the prompt. With this observation, we present several applications which monitor the image synthesis by editing the textual prompt only. This includes localized editing by replacing a word, global editing by adding a specification, and even delicately controlling the extent to which a word is reflected in the image. We present our results over diverse images and prompts, demonstrating high-quality synthesis and fidelity to the edited prompts.
Construction of the Index to Evaluate the Operating Skill Based on the Motion of CoM for a Hydraulic Excavator (2019)

Operations of the hydraulic excavator are difficult, and the productivity depends on operating skills. In order to improve the productivity of non-expert, it is necessary to quantitatively evaluate the operating skills difference between expert and non-expert. However, since a hydraulic excavator has the multi-link structure, the evaluation is not easy. In this paper, the evaluation system of skills which is expressed as the combined CoM (Center of Mass) of attachment is newly proposed. The system parameters are identified based on the motion of CoM at the boom up deceleration. Skills are estimated from these parameters, and the evaluation index is constructed.
Tandem Modification of Metal–Organic Frameworks by a Postsynthetic Approach (2008)

Mehr als einen Trick auf Lager: Bei der Modifizierung nach der Synthese durchlaufen metall-organische Gerüste (MOFs) mit reaktiven funktionellen Gruppen eine festgelegte Umwandlungssequenz, ohne dass sich die Struktur und Mikroporosität ändern. Auf diese Weise werden MOFs mit mehreren funktionellen Gruppen (im Schema als grüne und rosafarbene Kugeln dargestellt) erhalten. Supporting information for this article is available on the WWW under http://www.wiley-vch.de/contents/jc_2001/2008/z800686_s.pdf or from the author. Please note: The publisher is not responsible for the content or functionality of any supporting information supplied by the authors. Any queries (other than missing content) should be directed to the corresponding author for the article.