gebhart/patrepeval huggingface dataset:
<title>Design methodology for an optical mesh network</title> (2002)

A design methodology for an optical mesh network has recently been developed. For a given backbone packet network, we assume that a traffic matrix and an underlying optical fiber network are given. It is necessary to establish logical links between backbone nodes using optical wavelengths over the fiber network. The methodology chooses and sizes logical backbone links, chooses the physical paths for these logical links, and determines traffic routings over logical links under both normal and failure conditions. The methodology utilizes a linear programming engine embedded within a heuristic framework. This work presumes an optical networking environment utilizing dense wavelength division multiplexing (DWDM) and intelligent optical switch (lOS) equipment. It can be used to study potential future networks with high levels of traffic, e.g., in which demand entering the network at any given instant may be measured in terabits per second. In this paper, we describe the optical mesh network design problem that is addressed, outline the solution methodology and discuss some computational experience.
Flexible Integration of 3D Optical Resonators inside Fibers (2022)

We report a flexible method to integrate 3D optical resonators inside optical fibers. A prism-coupled cylindrical resonator and a free-space-coupled asymmetric resonator cavity are demonstrated in optical fibers with a quality factor up to 3.53×10 5 .
Expression of A New Endogenous Retrovirus-Associated Transcript in Hodgkin Lymphoma Cells (2019)

During characterization of a cDNA library from the Hodgkin lymphoma (HL) cell line L-1236, we discovered a new transcript derived from chromosome 1 at the long intergenic non-protein coding RNA 1768 (LINC01768)/colony stimulating factor 1 (CSF1) region. The first exon of this transcript from Hodgkin lymphoma cells (THOLE) starts in the predicted exon 4 of LINC01768 and is part of an endogenous retrovirus (ERV) from the HUERS-P1/LTR8 family. High expression of THOLE was only detectable in HL cell line L-1236. The expression of THOLE in L-1236 cell is another example for ERV/LTR-associated gene expression in HL cells. At the genome level, the HUERS-P1/LTR8 region including THOLE is only present in Hominoidea. The influence of ERV/LTRs on gene expression might explain the characteristic phenotype of human HL.
ChemInform Abstract: Bifunctional Oxygen Electrode Using Large Surface Area Perovskite‐Type Oxide Catalyst for Rechargeable Metal‐Air Batteries. (1993)

Abstract ChemInform is a weekly Abstracting Service, delivering concise information at a glance that was extracted from about 100 leading journals. To access a ChemInform Abstract of an article which was published elsewhere, please select a “Full Text” option. The original article is trackable via the “References” option.
ChemInform Abstract: A Convergent Radical Based Route to Trifluoromethyl Ketones and to α,β‐Unsaturated Trifluoromethyl Ketones. (2015)

Abstract Starting from vinyl sulfone (I) and various dithiocarbonates, trifluoromethyl ketones and their α,β‐unsaturated pendants become accessible via a radical based process.
ChemInform Abstract: Synthesis of Pyrimidines from 2‐Trichloromethyl‐4‐dimethylamino‐1,3‐ diaza‐1,3‐butadienes and Electron Deficient Acetylenes. (1992)

Abstract ChemInform is a weekly Abstracting Service, delivering concise information at a glance that was extracted from about 100 leading journals. To access a ChemInform Abstract of an article which was published elsewhere, please select a “Full Text” option. The original article is trackable via the “References” option.
Relationships of Pediatric Anthropometrics for CT Protocol Selection (2014)

Patient lateral distance and weight are essentially equally effective metrics to base maximum technique settings for pediatric patient-specific protocols. These metrics can also be used to help categorize appropriate reference levels for CT technique and size-specific dose estimates across the pediatric population.
ChemInform Abstract: Highly Regio‐ and Stereoselective One‐Pot Synthesis of Carbohydrate‐Based Butyrolactones. (2011)

Abstract The method has the potential to generate libraries for biological screening.
Supplementary Figures 1-3, Tables 1-3 from Steroid Receptor Coactivator-3 Expression in Lung Cancer and Its Role in the Regulation of Cancer Cell Survival and Proliferation (2023)

Supplementary Figures 1-3, Tables 1-3 from Steroid Receptor Coactivator-3 Expression in Lung Cancer and Its Role in the Regulation of Cancer Cell Survival and Proliferation
Residual error based CSI feedback enhancement for downlink multiuser MIMO (2013)

In this paper, we consider a downlink (DL) multiuser (MU) multi-input-multi-output (MIMO) channel with linear precoding in advanced cellular systems. We propose a general residual error based channel state information (CSI) feedback framework to improve the MU-MIMO performance. In particular, we propose a simple form of the enhanced feedback, i.e., residual error norm (REN) feedback in addition to the conventional implicit CSI report, in the Long Term Evolution (LTE) cellular systems. We also illustrate mechanisms that the base station uses to exploit the proposed enhanced CSI feedback for rate-matching. The system level simulations demonstrate that the proposed residual error based enhanced CSI feedback with REN provides substantial system throughput improvements in both homogenous and heterogenous networks.
Synthesis, Characterization, and Electronic Structures of Porphyrins Fused with Polycyclic Aromatic Ring Systems (2016)

A series of porphyrins fused with acenaphthylene, phenanthroline, and benzofluoranthene polycyclic aromatic rings were prepared by means of a 3+1 porphyrin synthesis approach and subsequent retro-Diels-Alder reaction of bicyclo[2.2.2]octadiene-fused precursors. Analysis of the magnetic circular dichroism spectra and the results of time-dependent DFT calculations are used to identify the reasons for the trends observed in the wavelengths and relative intensities of the Q bands of the products. Michl's perimeter model is used as a conceptual framework to explain the changes in the relative energies of the frontier π-molecular orbitals.
Characterization of cerebral blood oxygenation and flow changes during prolonged brain activation (1997)

The behavior of cerebral blood flow and oxygenation during prolonged brain activation was studied using magnetic resonance imaging (MRI) sensitized to flow and oxygenation changes, as well as positron emission tomography sensitized to flow. Neuronal habituation effects and hemodynamic changes were evaluated across tasks and cortical regions. Nine types of activation stimuli or tasks, including motor activation, vibrotactile stimulation, and several types of visual stimulation, were used. Both flow and oxygenation were evaluated in separate time course series as well as simultaneously using two different MRI methods. In most cases, the activation-induced increase in flow and oxygenation remained elevated for the entire stimulation duration. These results suggest that both flow rate and oxygenation consumption rate remain constant during the entire time that primary cortical neurons are activated by a task or a stimulus. Hum. Brain Mapping 5:93–109, 1997. © 1997 Wiley-Liss Inc.
Interleukin‐8 inhalation directly provokes bronchoconstriction in guinea pigs (1999)

IL-8 provokes bronchoconstriction without leukocyte accumulation in the airways, mediated in part by histamine release, in guinea pigs.
Subtype Analysis of Cryptosporidium Isolates From Children in Uganda (2006)

Cryptosporidium hominis and Cryptosporidium parvum isolates from children in Uganda were characterized by DNA sequence analysis of the GP60 gene. Eight alleles were identified, 4 C. hominis and 4 C. parvum, of which 3 represent new C. parvum families. The data show that it is highly likely that the route of transmission is anthroponotic.
211AtCl@US‐Tube Nanocapsules: A New Concept in Radiotherapeutic‐Agent Design (2007)

Get shorty: Ultrashort carbon nanotubes (US-tubes) ranging in length from 20–50 nm have been loaded internally (see image) with an α-emitting radionuclide (At-211) for targeted radiotherapy. By loading the radionuclide inside the carbon nanotube as a mixed halogen (211AtCl), the 211AtCl@US-tube nanostructures offer a new paradigm in radiotherapeutic containment and delivery as the first carbon-nanotube-based radiotherapeutic agent.
Critical area for memory decline after mesial temporal resection in epilepsy patients (2020)

Using voxel-based analysis, which accounts for the individual differences in the resection, the authors found a critical region for postoperative memory decline that is not revealed in the region-of-interest or groupwise comparison. Particularly, resection of the hippocampus was related to associative memory. In both verbal and visual memory, resection of the anterior part of the hippocampus was associated with immediate recall, and resection of the posterior part of the hippocampus was associated with delayed recall. Therefore, the authors' results suggest that selective resection may be effective in preserving postoperative memory decline.
Usporedba gerijatrijskog mortaliteta Hrvatske i potencijalno izgubljene godine života (2000. - 2004.) (2005)

Ubrzanim starenjem pucanstva Hrvatske mijenja se struktura mortaliteta, morbiditeta i struktura koristenja zdravstvene zastite cjelokupnog stanovnistva, zbog cega proizlazi sve vece isticanje javnozdravstvenog interesa o povezanosti životne dobi populacije s objektivnim zadovoljenjem zdravstvenih potreba starijih ljudi. Gerontolosko-javnozdravstvena analiza udjela umrlih osoba starih 65 i vise godina, kojih je u promatranom razdoblju 2000. - 2004. umrlo ukupno 193 717 u odnosu na ukupan broj umrlih osoba, ukazuje na njegov konstantni porast: 75, 1% u 2000 ; 75, 5% u 2001 ; 76, 8% u 2002 ; 77, 9% u 2003. i 78, 0% u 2004. Opca stopa mortaliteta bila je najveca u 2003. (11, 8‰ ). Također je i specificna stopa mortaliteta, odnosno broj umrlih osoba starih 65 i vise na 1 000 stanovnika iste dobi, bila najveca u 2003. godini ; 56, 2‰ . Gerontoloska analiza udjela umrlih u dobi od 65 i vise godina unutar pojedinacnih vodecih skupina bolesti kao uzroka smrti u 2004. godini ukazuje na njihov visoki udio od 87, 4% u ukupno 24959 umrlih od bolesti cirkulacijskog sustava (I00-I99) u Hrvatskoj i udjelu od 86, 7% umrlih 65 i vise godisnjaka u Gradu Zagrebu. U Hrvatskoj 2004. godine umrli u dobi od 65 i vise godina cine izrazito visokih 89, 3% u ukupno 2895 umrlih od skupine bolesti disnog sustava (J00-J99), 68, 0% u ukupno 12408 umrlih u skupini novotvorina (C00-D48), 63, 7% u ukupno 2370 umrlih od skupine bolesti probavnog sustava (K00-K93) te 45, 1% od ukupno 2870 umrlih u skupini ozljeda, otrovanja i nekih drugih posljedica vanjskog uzroka (S00-T98). Fokusirani gerontolosko - javnozdravstveni pokazatelji o morbiditetu, funkcionalnoj onesposobljenosti i smrtnosti u starijih ljudi osnova su za izradbu primjerenog i ucinkovitog Programa zdravstvenih mjera i postupaka u zastiti zdravlja starijih ljudi, a koji ukljucuje i primjenu s evaluacijom Programa primarne, sekundarne i tercijarne prevencije za starije ljude. Cilj je sprjecavanje njihove prerane smrtnosti kao i unapređivanje zastite zdravlja i funkcionalne sposobnosti hrvatskog starackog pucanstva i u dubokoj starosti.
Experimental Automatic Calibration of a Semi-Active Suspension\n Controller via Bayesian Optimization (2020)

The End-of-Line (EoL) calibration of semi-active suspension systems for road\nvehicles is usually a critical and expensive task, needing a team of vehicle\nand control experts as well as many hours of professional driving. In this\npaper, we propose a purely data-based tuning method enabling the automatic\ncalibration of the parameters of a proprietary suspension controller by relying\non little experimental time and exploiting Bayesian Optimization tools. A\ndetailed methodology on how to select the most critical degrees of freedom of\nthe algorithm is also provided. The effectiveness of the proposed approach is\nassessed on a commercial multi-body simulator as well as on a real car.\n
An Investigation of the Ability of Geophysical Methods to Detect and Define Fulachta Fia (Burnt Mounds) on Clare Island, Co. Mayo, Ireland (1996)

Measurements of electrical resistivity and magnetic susceptibility have been made in order to determine the geophysical signature of a number of fulachta fia (burnt mounds of probable Bronze Age) on Clare Island, County Mayo, Ireland. Visible remains of fulachta fia on Clare Island frequently show a characteristic horseshoe-shaped structure at the surface, covered by a very thin layer of topsoil. Magnetic susceptibility and electrical resistivity surveys over two intact fulachta fia were carried out in order to map their lateral and vertical extent. The magnetic susceptibility surveys provided horseshoe-shaped signatures, which immediately identify the extent and orientation of both the surveyed monuments. The success of the resistivity method was found to be dependant upon the proximity of unwanted sources of resistivity variation not related to these archaeological targets, and possibly climatological and method-related influences. These results illustrate the feasibility of using geophysical methods to define a characteristic signature related to fulachta fia. The reproduction of this signature over suspected archaeological sites can provide confirmation of the existence of a monument without the need for an intrusive excavation. Resistivity surveys over two damaged fulachta fia partially exposed in the bank of a drainage channel have revealed useful information on the degree of preservation of these monuments. Resistivity anomalies were identified coincident with the location of fractured rock exposed in the channel bank, despite the terrain effect caused by the proximity to the channel edge.
Metal Ion Binding Properties and Conformational States of Calcium- and Integrin-Binding Protein (2004)

Calcium- and integrin-binding protein (CIB) is a novel member of the helix-loop-helix family of regulatory calcium-binding proteins which likely has a specific function in hemostasis through its interaction with platelet integrin alphaIIbbeta(3). The significant amino acid sequence homology between CIB and other regulatory calcium-binding proteins such as calmodulin, calcineurin B, and recoverin suggests that CIB may undergo a calcium-induced conformational change; however, the mechanism of calcium binding and the details of a structural change have not yet been investigated. Consequently, we have performed a variety of spectroscopic and microcalorimetric studies of CIB to determine its calcium binding characteristics, and the subsequent conformational changes that occur. Furthermore, we provide the first evidence for magnesium binding to CIB and determine the structural consequences of this interaction. Our results indicate that in the absence of any bound metal ions, apo-CIB adopts a folded yet highly flexible molten globule-like structure. Both calcium and magnesium binding induce conformational changes which stabilize both the secondary and tertiary structure of CIB, resulting in considerable increases in the thermal stability of the proteins. CIB was found to bind two Ca(2+) ions in a sequential manner with dissociation constants (K(d)) near 0.54 and 1.9 microM for sites EF-4 and EF-3, respectively. In contrast, CIB bound only one Mg(2+) ion to EF-3 with a K(d) near 120 microM. Together, our results suggest that CIB may exist in multiple structural and metal ion-bound states in vivo which may play a role in its regulation of target proteins such as platelet integrin.
An investigation of fundamental factors influencing the permittivity of composite for embedded capacitor (2003)

The effect of the polymer permittivity on the permittivity of the polymer/lead magnesium niobate-lead titanate (PMN-PT) composite was investigated using epoxies, polyimides, polycarboxylic acids and PMMA. The permittivity of the polymers (without ceramic loading) ranged from 2.8 to 4.6. The permittivity of the composites was found to agree with the values predicted by the Lichtenecker and Smith equations except for epoxies. Polyacrylic acid (PAA) was found to be present on PMN-PT due to an acid-base neutralization reaction. Novolac epoxy was not found on PMN-PT. Because of the neutralization reaction, polycarboxylic acids could act as a surfactant to deagglomerate PMN-PT powder while epoxies may not. An electrostatic field simulation showed that the finer the particle size, the higher the permittivity of composite. These results could account for the lower permittivity of composites using epoxies than those of other polymers.
Modeling the Combining Site of the Human Asialoglycoprotein Receptor (1994)

Abstract A model for the carbohydrate recognition domain (CRD) and combining site of the human asialoglycoprotein (ASGP) receptor has been computed on the basis of the close sequence homology with the mannose‐binding lectin (MBP), whose three‐dimensional structure in complex with a ligand has been determined by crystallographic methods (Weis, W.I.; Drickamer, K.; Hendrickson, W.A. Nature 1992, 360: 127). Within the limitations of modeling methods, the model is compatible with data on ligand binding of the family C‐type lectins, of which the MBP and the ASGP receptor are members. The model derived can serve as a guide for designing site‐directed mutagenesis experiments in order to further elucidate the origins of specificity of the ASGP receptor toward galactose. In particular, the model focuses attention on the possible role of position 207 (MBP sequence numbering) in promoting galactose binding.
ChemInform Abstract: Microwave‐Assisted Ester Formation Using O‐Alkylisoureas: A Convenient Method for the Synthesis of Esters with Inversion of Configuration. (2009)

Abstract ChemInform is a weekly Abstracting Service, delivering concise information at a glance that was extracted from about 200 leading journals. To access a ChemInform Abstract of an article which was published elsewhere, please select a “Full Text” option. The original article is trackable via the “References” option.
A helically symmetric stellarator (HSX) (1999)

The Helically Symmetric Experiment (HSX) Is a quasi-helically symmetric (QHS) stellarator currently under construction at the Torsatron/Stellarator Laboratory of the University of Wisconsin-Madison. This device is unique in its magnetic design in that the magnetic field spectrum possesses only a single dominant (helical) component. This design avoids the large direct orbit losses associated with conventional stellarators. The restoration of an ignorable coordinate in the confining magnetic field makes this device analogous to an axisymmetric q=1/3 tokamak with respect to neoclassical confinement.
Differential blending for expressive sketch-based posing (2013)

Generating highly expressive and caricatured poses can be difficult in 3D computer animation because artists must interact with characters indirectly through complex character rigs. Furthermore, since caricatured poses often involve large bends and twists, artifacts arise with traditional skinning algorithms that are not designed to blend large, disparate rotations and cannot represent extremely large rotations. To overcome these problems, we introduce a differential blending algorithm that can successfully encode and blend large transformations, overcoming the inherent limitation of previous skeletal representations. Based on this blending method, we illustrate a sketch-based interface that supports curved bones and implements the line-of-action concept from hand-drawn animation to create expressive poses in 3D animation. By interpolating stored differential transformations across temporal keyframes, our system also generates caricatured animation. We present a detailed technical analysis of our differential blending algorithm and show several posing and animation results created using our system to demonstrate the utility of our method in practice.
Figure S3 from An AIB1 Isoform Alters Enhancer Access and Enables Progression of Early-Stage Triple-Negative Breast Cancer (2023)

&lt;p&gt;A) Representative images of hematoxylin and eosin (H&amp;E) staining of MCFDCIS, MCFDCIS-Î"4 and mixed (4:1 respectively) tumors that were injected in the mammary fat pad of SCID/Beige mice after two or five weeks. MCFDCIS-Î"4 tumors were not collected at two weeks due to small tumor size. Scale bar=50Î¼m. B) Growth of subcutaneous tumors of DCIS or DCIS-Î"4-hy in athymic nude mice. n=5. **p&lt;0.01. H&amp;E tumor histology at 3 weeks. Scale bar = 50Î¼m. C) Quantification of P63 and Luciferase (unique to DCIS) co-localization in mixed tumors at 2 and 5 weeks. ROI= 2007x1500um. **p&lt;0.01. D) Representative images and quantification of p63 and CD44 IHC on tumors from S3B. **p&lt;0.01, ***p&lt;0.001. Scale bar = 50Î¼m. E) Bioluminescence images showing lung metastases at 2-3 months. Signal is detected from parental DCIS that harbor the luciferase construct. DCIS-Î"4 cells are luciferase negative. F) qPCR of genomic DNA from the lungs of mice harboring mix tumors. Primers are specific to either the unique region on AIB1 gene that was created by CRISPR editing (CRISPR) or human intronic DNA as a control (Intronic). Mouse intronic DNA was used for normalization. G) Bioluminescence images and graph showing tumor recurrence rate after DCIS or Mix primary tumor removal when they reached an area of ~80mm2. Two million cells were injected in the MFP of SCID mice. H) qPCR of human genomic DNA for either the unique region on AIB1 gene that was created by CRISPR editing (CRISPR) or human intronic DNA as a control (Intronic). MCFDCIS and MCFDCIS-Î"4 cell lines were used as reference points for MCFDCIS and Mix tumors (MCFDCIS and MCFDCIS-Î"4).&lt;/p&gt;
Improved Resolution Synthesis for Image Interpolation (2006)

The Resolution Synthesis algorithm (ResSynth or RS) is an image interpolation algorithm which computes the minimum mean-squared error estimate of the high-resolution image, given the low-resolution image. ResSynth produces sharper images than the commonly used Bilinear and Bicubic interpolation; and it is computationally efficient. However, the original ResSynth algorithm has some deficiencies, which are: 1) it tends to aggravate noise and JPEG artifacts in the image; 2) it produces halos around strong edges in the image; 3) it occasionally generates &#x201C;color sprinkles&#x201D; - pixel errors around the edges. To overcome these problems, we developed the New ResSynth algorithm based on the original algorithm. New ResSynth significantly improves the quality of the interpolated images.
Structural and Spectroscopic Characterization of an Unprecedented Cationic Transition‐Metal η1‐Silane Complex (2008)

Kein Platz für Side-on: Im gezeigten Komplex bindet Et3SiH in einer ungewöhnlichen End-on-Koordination über die Si-H-Bindung an das kationische IrIII-Zentrum (weiß H, grün Si, rosa Ir, rot O, orange P, grau C). Eine merkliche Metall-Silicium-Wechselwirkung tritt nicht auf, und der Ir⋅⋅⋅Si-Abstand von 3.346(1) Å ist 0.97 Å größer als die Summe der Kovalenzradien von Ir und Si. DFT-Studien zufolge bestimmen die tBu-Substituenten am zweizähnigen Phosphorliganden den Koordinationsmodus des Silans. Supporting information for this article is available on the WWW under http://www.wiley-vch.de/contents/jc_2001/2008/z705359_s.pdf or from the author. Please note: The publisher is not responsible for the content or functionality of any supporting information supplied by the authors. Any queries (other than missing content) should be directed to the corresponding author for the article.