gebhart/patrepeval huggingface dataset:
A Systematic Review of Vitamin D during Pregnancy and Postnatally and Symptoms of Depression in the Antenatal and Postpartum Period from Randomized Controlled Trials and Observational Studies (2022)

Depression is a common mood disorder associated with childbirth and is hypothesized to be affected by low vitamin D. This systematic review identified two randomized controlled trials (RCT) of vitamin D supplementation for the treatment or prevention of depressive symptoms in the perinatal period, as well as 18 observational studies of vitamin D exposure and depression in the antenatal and postnatal periods. Both RCTs claimed an improvement in depressive symptoms in the vitamin D group, although the sample sizes were too small to draw firm conclusions. The case-control and cohort studies had mixed findings and were limited by study quality. There were inconsistent results within the few studies with a more robust methodology or within samples restricted to women likely to have depression. The current evidence is inconclusive due to the poor quality and heterogeneity of studies, likely contributing to the contradictory findings. Given there are already numerous RCTs of prenatal vitamin D supplementation, we recommend adding an appropriate measure of depression in the perinatal period to assist in resolving the uncertainty.
NMR Analysis of Hydroxyl‐Terminated Polybutadiene End Groups and Reactivity Differences with Monoisocyanates (2018)

ABSTRACT Nuclear magnetic resonance (NMR) spectroscopy was employed to investigate both the end group microstructure of R‐45HTLO hydroxyl‐terminated polybutadiene (HTPB) and reactivity rate differences among the different types of end groups. There is some conflict in the literature about the exact nature of the end groups and which resonance frequencies represent the three main types of methylene‐hydroxyl end groups (cis, trans, or vinyl) and other possible branch point end groups (geraniol). NMR spectral analysis of small molecule model compounds supports the cis, trans, and vinyl end groups model. A model reaction scheme is proposed that produces branch points without the requirement of any “geraniol” structures. The reaction, with and without catalyst, of the various HTPB end groups with three different monoisocyanates (2‐fluorophenyl isocyanate, phenyl isocyanate, and tert ‐butyl isocyanate) monitored by NMR spectroscopy, revealed different reactivity rates that are correlated with the assigned structures. In both the catalyzed and uncatalyzed reactions, the vinyl end groups reacted slower than the cis or trans end groups. As expected, the bulky isocyanates were the slowest to react, while the isocyanate group with electron withdrawing groups reacted the fastest. © 2018 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2018 , 56 , 2665–2671
Characterization of Neutrophilic Fe(II)-Oxidizing Bacteria Isolated from the Rhizosphere of Wetland Plants and Description of<i>Ferritrophicum radicicola</i>gen. nov. sp. nov., and<i>Sideroxydans paludicola</i>sp. nov. (2007)

Iron deposits (Fe plaque) on wetland plant roots contain abundant microbial populations, including Fe(II)-oxidizing bacteria (FeOB) that have not been cultured previously. In this study, 4 strains of Fe plaque-associated FeOB were isolated from 4 species of wetland plants. All 4 isolates grew in tight association with Fe-oxides, but did not form any identifiable Fe-oxide structures. All strains were obligate lithotrophic Fe(II)-oxidizers that were microaerobic, and were unable to use other inorganic or organic energy sources. One strain, BrT, was shown to fix 14 CO 2 at a rate consistent with its requirement for total cell carbon. The doubling times for the strains varied between 9.5 and 15.8 hours. The fatty acid methyl ester (FAME) profiles of 2 strains, BrT and CCJ, revealed that 16:0, 15:1 isoG, and 14:0 were dominant fatty acids. Phylogenetic analysis of the 16S rRNA gene indicated that all the strains were Betaproteobacteria. Two of the strains, BrT and Br-1 belong to a new species, Sideroxydans paludicola; a third strain, LD-1, is related to Sideroxydans lithotrophicus, a recently described species of FeOB. The fourth isolate, Ferritrophicum radicicola, represented a new genus in a new order of Betaproteobacteria, the Ferritrophicales. There are no other cultured isolates in this order. A small subunit rRNA gene-based, cultivation-independent analysis of Typha latifolia collected from a wetland revealed terminal restriction fragment profiles (tRFLP) consistent with the presence of these bacteria in the rhizosphere. These novel organisms likely play an important role in Fe(II) oxidation kinetics and Fe cycling within many terrestrial and freshwater environments.
Culturing and Expansion of Precursor Cells from the Adult Hippocampus (2013)

It is now well established that a resident population of neural precursor cells continues to generate new neurons in the adult hippocampus throughout life. Numerous studies have suggested that these newborn neurons preferentially participate in the functional hippocampal circuitry that leads to enhancement of learning, cognition and mood. Therefore, understanding the molecular mechanisms that regulate the activity of these endogenous precursor cells is paramount to develop novel regenerative strategies for the treatment of neurological and psychiatric disorders. The neurosphere assay has been instrumental in discovering the presence of stem and precursor cell population from several brain regions. In this chapter, we describe this assay to specifically isolate and culture neural stem and precursor cell populations from the adult hippocampus of mice. In addition, we provide methods to conduct detailed assays to examine their functional properties such as proliferation, self-renewal, and differentiation.
A new Vitreoscilla filiformis extract grown on spa water-enriched medium activates endogenous cutaneous antioxidant and antimicrobial defenses through a potential Toll-like receptor 2/protein kinase C, zeta transduction pathway (2013)

Vitreoscilla filiformis (VF) biomass (VFB) has been widely used in cosmetic preparations and shown to modulate the major inducible free-radical scavenger mitochondrial superoxide dismutase in skin cells. By adding La Roche-Posay (LRP) thermal spring water to the VF culture medium, we obtained a biomass (LRP-VFB) with a similar mitochondrial superoxide dismutase activation capacity to VF. Also, the new biomass more powerfully stimulated mRNA expression and antimicrobial peptides in reconstructed epidermis. Interestingly, a predictive computer model that analyzed transducing events within skin epidermal cells suggested that this protective activity may involve the Toll-like receptor 2/protein kinase C, zeta transduction pathway. Protein kinase C, zeta inhibition was effectively shown to abolish VFB-induced gene stimulation and confirmed this hypothesis. This thus opens new avenues for investigation into the improvement of skin homeostatic defense in relation to the control of its physiological microbiota and innate immunity.
Arthritis Medicines and Cardiovascular Events—“House of Coxibs” (2005)

Our website uses cookies to enhance your experience. By continuing to use our site, or clicking "Continue," you are agreeing to our Cookie Policy | Continue JAMA HomeNew OnlineCurrent IssueFor Authors Publications JAMA JAMA Network Open JAMA Cardiology JAMA Dermatology JAMA Health Forum JAMA Internal Medicine JAMA Neurology JAMA Oncology JAMA Ophthalmology JAMA Otolaryngology–Head & Neck Surgery JAMA Pediatrics JAMA Psychiatry JAMA Surgery Archives of Neurology & Psychiatry (1919-1959) Podcasts Clinical Reviews Editors' Summary Medical News Author Interviews More JN Learning / CMESubscribeJobsInstitutions / LibrariansReprints & Permissions Terms of Use | Privacy Policy | Accessibility Statement 2023 American Medical Association. All Rights Reserved Search All JAMA JAMA Network Open JAMA Cardiology JAMA Dermatology JAMA Forum Archive JAMA Health Forum JAMA Internal Medicine JAMA Neurology JAMA Oncology JAMA Ophthalmology JAMA Otolaryngology–Head & Neck Surgery JAMA Pediatrics JAMA Psychiatry JAMA Surgery Archives of Neurology & Psychiatry Input Search Term Sign In Individual Sign In Sign inCreate an Account Access through your institution Sign In Purchase Options: Buy this article Rent this article Subscribe to the JAMA journal
Post-acute sequelae of COVID-19 symptom phenotypes and therapeutic strategies: A prospective, observational study (2022)

We identified three clinically relevant PASC symptom-based phenotypes, which received different therapeutic interventions with varying response rates. These data may be helpful in tailoring individual treatment programs.
Context modeling and accessibility for 3D scalable compression (2004)

Highly scalable video compression based on invertible motion adaptive lifting transforms has emerged as a promising area in image processing research and an important component in interactive multimedia technology. However, within this feed-forward framework, the potential for coding efficiency improvement and its impact on random accessibility still has not been carefully assessed. In this paper, we compare the merits of several three-dimensional context coding strategies from an information-theoretic perspective. The variation in random access cost in response to coding parameter adjustments is analyzed, for a variety of spatial and temporal configurations.
Efficient Single-Photon Sources Based on Low-Density Quantum Dots in Photonic-Crystal Nanocavities (2006)

An efficient single-photon source based on low-density InGaAs quantum dots in a photonic-crystal nanocavity is demonstrated. The single-photon source features the effects of a photonic band gap, yielding a single-mode spontaneous emission coupling efficiency as high as beta = 92% and a linear polarization degree up to p = 95%. This appealing performance makes it well suited for practical implementation of polarization-encoded schemes in quantum cryptography.
Inhibition of lymphoma vascularization and dissemination by estrogen receptor β agonists (2014)

Most lymphomas show an increased incidence and poorer prognosis in males vs females, suggesting endocrine regulation. We have previously shown that tumor growth in vivo of a murine T-cell-derived lymphoma is repressed following activation of estrogen receptor β (ERβ, ESR2). By using ERβ-deficient mice, we now demonstrate that this inhibition is mediated via a direct effect on the tumor cells and not on the microenvironment. Furthermore, we show that the growth-suppressing effects of ERβ agonist are also valid for human B-cell lymphomas as demonstrated in tumors derived from Granta-519 mantle cell lymphoma (MCL) and Raji Burkitt lymphoma (BL) cells. In Granta-519 MCL tumors, activation of ERβ reduced expression of BAFF and GRB7, 2 important molecules involved in B-cell proliferation and survival. Importantly, activation of ERβ inhibited angiogenesis and lymphangiogenesis, possibly mediated by impaired vascular endothelial growth factor C expression. Furthermore, using disseminating Raji BL cells, we show that ERβ activation reduces dissemination of grafted Raji BL tumors. We also show by immunohistochemistry that ERβ is expressed in primary MCL tissue. These results suggest that targeting ERβ with agonists may be valuable in the treatment of some lymphomas, affecting several aspects of the malignant process, including proliferation, vascularization, and dissemination.
Preliminary evidence for a fronto‐parietal dysfunction in able‐bodied participants with a desire for limb amputation (2008)

These results document the existence of an unusual condition in able-bodied participants characterized by a person's desire for the amputation of one or more particular limbs. Left-sidedness, limb specificity and somatosensory disturbances of the affected limb are suggestive of abnormal brain mechanisms in right fronto-parietal cortex. Based on this association we suggest that desire for limb amputation may be conceptualized as asomatognosia due to disturbed integration of multi-sensory information of the affected body parts into a coherent cerebral representation of the own body. This suggestion has to be regarded with caution as we did not perform any neurological examination.
Discrimination of one-photon and two-photon coherence parts in electromagnetically induced transparency for a ladder-type three-level atomic system (2011)

We present discrimination of the effect of one-photon and two-photon coherences in electromagnetically induced transparency for a three-level ladder-type atomic system. After the optical Bloch equations for a three-level atom, with either cycling or non-cycling transitions, were solved numerically, the solutions were averaged over the velocity distribution and finite transit time. Through this we were able to discriminate one-photon and two-photon coherence parts of the calculated spectra. We also found that the spectra showed peaks as the branching ratio of the intermediate (excited) state increased (decreased). The experimental results of previous reports [H. S. Moon, et al., Opt. Express 16, 12163 (2008); H. S. Moon and H. R. Noh, J. Phys. B 44, 055004 (2011)] could well be accounted for by this discrimination of one-photon and two-photon coherences in the transmittance signals for the simplified three-level atomic system.
β2-Microglobulin Amyloid Fibril-Induced Membrane Disruption Is Enhanced by Endosomal Lipids and Acidic pH (2014)

Although the molecular mechanisms underlying the pathology of amyloidoses are not well understood, the interaction between amyloid proteins and cell membranes is thought to play a role in several amyloid diseases. Amyloid fibrils of β2-microglobulin (β2m), associated with dialysis-related amyloidosis (DRA), have been shown to cause disruption of anionic lipid bilayers in vitro. However, the effect of lipid composition and the chemical environment in which β2m-lipid interactions occur have not been investigated previously. Here we examine membrane damage resulting from the interaction of β2m monomers and fibrils with lipid bilayers. Using dye release, tryptophan fluorescence quenching and fluorescence confocal microscopy assays we investigate the effect of anionic lipid composition and pH on the susceptibility of liposomes to fibril-induced membrane damage. We show that β2m fibril-induced membrane disruption is modulated by anionic lipid composition and is enhanced by acidic pH. Most strikingly, the greatest degree of membrane disruption is observed for liposomes containing bis(monoacylglycero)phosphate (BMP) at acidic pH, conditions likely to reflect those encountered in the endocytic pathway. The results suggest that the interaction between β2m fibrils and membranes of endosomal origin may play a role in the molecular mechanism of β2m amyloid-associated osteoarticular tissue destruction in DRA.
Detection of spreader nodes in human-SARS-CoV protein-protein interaction network (2021)

The entire world is witnessing the coronavirus pandemic (COVID-19), caused by a novel coronavirus (n-CoV) generally distinguished as Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2). SARS-CoV-2 promotes fatal chronic respiratory disease followed by multiple organ failure, ultimately putting an end to human life. International Committee on Taxonomy of Viruses (ICTV) has reached a consensus that SARS-CoV-2 is highly genetically similar (up to 89%) to the Severe Acute Respiratory Syndrome Coronavirus (SARS-CoV), which had an outbreak in 2003. With this hypothesis, current work focuses on identifying the spreader nodes in the SARS-CoV-human protein-protein interaction network (PPIN) to find possible lineage with the disease propagation pattern of the current pandemic. Various PPIN characteristics like edge ratio, neighborhood density, and node weight have been explored for defining a new feature <i>spreadability index</i> by which spreader proteins and protein-protein interaction (in the form of network edges) are identified. Top spreader nodes with a high <i>spreadability index</i> have been validated by Susceptible-Infected-Susceptible (SIS) disease model, first using a synthetic PPIN followed by a SARS-CoV-human PPIN. The ranked edges highlight the path of entire disease propagation from SARS-CoV to human PPIN (up to level-2 neighborhood). The developed network attribute, <i>spreadability index</i>, and the generated SIS model, compared with the other network centrality-based methodologies, perform better than the existing state-of-art.
Deciphering Predictive Schedulers for Heterogeneous-ISA Multicore Architectures (2019)

Heterogeneous architectures have become increasingly common. From co-packaging small and large cores, to GPUs alongside CPUs, to general-purpose heterogeneous-ISA architectures with cores implementing different ISAs. As diversity of execution cores grows, predictive models become of paramount importance for scheduling and resource allocation. In this paper, we investigate the capabilities of performance predictors in a heterogeneous-ISA setting, as well as the predictors' effects on scheduler quality. We follow an unbiased feature selection methodology to identify the optimal set of features for this task, instead of pre-selecting features before training. We propose metrics that bridge the gap between traditional prediction accuracy metrics and a scheduler's performance. We further present our evaluation methodology, which was meticulously designed with this study in mind, and finally, we incorporate our findings in ML-based schedulers and evaluate their sensitivity to the underlying system's level of heterogeneity.
Electrochemical functionalization of vertically aligned carbon nanotube arrays with molybdenum oxides for the development of a surface-charge-controlled sensor (2006)

The modification of inorganic polymeric oxides at the surface of carbon nanotubes is of paramount importance for developing new sensors. In this study, molybdenum oxide (MoOx) film was electrodeposited on the surface of multi-walled carbon nanotubes (MWNTs) by cycling the potential between +0.20 and ?0.80?V (versus 3?M KCl?Ag|AgCl) in Na2MoO4 solution. The MoOx-modified nanotube (MoOx/MWNT) electrode displays well-defined redox transitions in 5?mM H2SO4 or in phosphate buffer solution (PBS), which can be attributed to the reductive formation and the re-oxidation of hydrogen molybdenum oxides. X-ray photoelectron spectra (XPS) showed that the deposited MoOx films are mainly Mo6+ complexes. Both MWNT and MoOx/MWNT electrodes have ideal reversibility in 5?mM K3[Fe(CN)6] in 1?M KCl as supporting electrolytes at all sweep rates (0.02?1.00?V?s?1) by cyclic voltammetry. The negatively charged surface of MoOx/MWNTs can further attract molecular cations such as Ru(NH3)63+. The MoOx/MWNT electrode exhibited electrocatalytic ability towards the reduction of bromate due to high surface area and the fast electron transfer rate of nanotubes. Thus, electrochemical modification of inorganic polymeric oxides on the carbon nanotube provides a simple method for the preparation of novel sensors.
Autoinducer-2 and QseC Control Biofilm Formation and <i>In Vivo</i> Virulence of <i>Aggregatibacter actinomycetemcomitans</i> (2010)

Biofilm formation by the periodontal pathogen Aggregatibacter actinomycetemcomitans is dependent upon autoinducer-2 (AI-2)-mediated quorum sensing. However, the components that link the detection of the AI-2 signal to downstream gene expression have not been determined. One potential regulator is the QseBC two-component system, which is part of the AI-2-dependent response pathway that controls biofilm formation in Escherichia coli. Here we show that the expression of QseBC in A. actinomycetemcomitans is induced by AI-2 and that induction requires the AI-2 receptors, LsrB and/or RbsB. Additionally, inactivation of qseC resulted in reduced biofilm growth. Since the ability to grow in biofilms is essential for A. actinomycetemcomitans virulence, strains that were deficient in QseC or the AI-2 receptors were examined in an in vivo mouse model of periodontitis. The DeltaqseC mutant induced significantly less alveolar bone resorption than the wild-type strain (P < 0.02). Bone loss in animals infected with the DeltaqseC strain was similar to that in sham-infected animals. The DeltalsrB, DeltarbsB, and DeltalsrB DeltarbsB strains also induced significantly less alveolar bone resorption than the wild type (P < 0.03, P < 0.02, and P < 0.01, respectively). However, bone loss induced by a DeltaluxS strain was indistinguishable from that induced by the wild type, suggesting that AI-2 produced by indigenous microflora in the murine oral cavity may complement the DeltaluxS mutation. Together, these results suggest that the QseBC two-component system is part of the AI-2 regulon and may link the detection of AI-2 to the regulation of downstream cellular processes that are involved in biofilm formation and virulence of A. actinomycetemcomitans.
Shoulder Arthroscopy Literature Remains Controversial (2012)

The shoulder arthroscopy articles in this issue continue the controversy in this area of investigation.1-21 We are not sure if the conclusions published in our October 2012 issue will be supported or refuted by future research.22 All studies have limitations, usually in the form of bias, which can lead to reaching the incorrect conclusion.23 Furthermore, when it comes to clinical recommendations, no guidelines are definitive.24
Complete Visual Recovery From Severe Outer Retinitis After Tonsillitis (2020)

Prednisolone is an effective treatment for a disease that is believed to be due to suspicious involvement of the autoimmune system. Even severe outer retinitis can recover completely with rapid diagnosis and treatment.
Trisannelated benzene synthesis by zirconium halide catalyzed cyclodehydration of cycloalkanones (1991)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTTrisannelated benzene synthesis by zirconium halide catalyzed cyclodehydration of cycloalkanonesHideki Shirai, Nobushige Amano, Yukihide Hashimoto, Eiji Fukui, Yasutaka Ishii, and Masaya OgawaCite this: J. Org. Chem. 1991, 56, 6, 2253–2256Publication Date (Print):March 1, 1991Publication History Published online1 May 2002Published inissue 1 March 1991https://pubs.acs.org/doi/10.1021/jo00006a056https://doi.org/10.1021/jo00006a056research-articleACS PublicationsRequest reuse permissionsArticle Views595Altmetric-Citations29LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose Get e-Alerts